RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
VEGFB-202ENST00000426086 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
VEGFB-202ENST00000426086 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
VEGFB-202ENST00000426086 ADCY10Q96PN6 1610 aa24.34■■□□□ 1.49
VEGFB-202ENST00000426086 MAPKBP1O60336 1514 aa24.33■■□□□ 1.49
VEGFB-202ENST00000426086 DIP2BQ9P265 1576 aa24.33■■□□□ 1.48
VEGFB-202ENST00000426086 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
VEGFB-202ENST00000426086 KIAA0586Q9BVV6 1533 aa24.23■■□□□ 1.47
VEGFB-202ENST00000426086 KDM4FA0A1W2PPD8 638 aa24.22■■□□□ 1.47
VEGFB-202ENST00000426086 IGF1RP08069 1367 aa24.21■■□□□ 1.47
VEGFB-202ENST00000426086 KDM6BO15054 1643 aa24.2■■□□□ 1.46
VEGFB-202ENST00000426086 TSPOAP1O95153 1857 aa24.18■■□□□ 1.46
VEGFB-202ENST00000426086 CUL7Q14999 1698 aa24.11■■□□□ 1.45
VEGFB-202ENST00000426086 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
VEGFB-202ENST00000426086 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
VEGFB-202ENST00000426086 PTPRGP23470 1445 aa24.08■■□□□ 1.44
VEGFB-202ENST00000426086 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
VEGFB-202ENST00000426086 PPRC1Q5VV67 1664 aaKnown RBP24.02■■□□□ 1.44
VEGFB-202ENST00000426086 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
VEGFB-202ENST00000426086 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
VEGFB-202ENST00000426086 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
VEGFB-202ENST00000426086 CARMIL2Q6F5E8 1435 aa23.94■■□□□ 1.42
VEGFB-202ENST00000426086 GLI2P10070 1586 aa23.94■■□□□ 1.42
VEGFB-202ENST00000426086 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
VEGFB-202ENST00000426086 COL17A1Q9UMD9 1497 aaPredicted RBP23.93■■□□□ 1.42
VEGFB-202ENST00000426086 PLB1Q6P1J6 1458 aa23.92■■□□□ 1.42
VEGFB-202ENST00000426086 UHRF1BP1LA0JNW5 1464 aa23.91■■□□□ 1.42
VEGFB-202ENST00000426086 DISP1Q96F81 1524 aa23.9■■□□□ 1.42
VEGFB-202ENST00000426086 UACAQ9BZF9 1416 aa23.89■■□□□ 1.41
VEGFB-202ENST00000426086 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
VEGFB-202ENST00000426086 ILDR1Q86SU0 546 aaPredicted RBP23.87■■□□□ 1.41
VEGFB-202ENST00000426086 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
VEGFB-202ENST00000426086 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.41
VEGFB-202ENST00000426086 KDM5BQ9UGL1 1544 aa23.83■■□□□ 1.41
VEGFB-202ENST00000426086 ZCCHC11Q5TAX3 1644 aaKnown RBP23.79■■□□□ 1.4
VEGFB-202ENST00000426086 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
VEGFB-202ENST00000426086 KIAA0556O60303 1618 aa23.75■■□□□ 1.39
VEGFB-202ENST00000426086 RAPGEF2Q9Y4G8 1499 aa23.73■■□□□ 1.39
VEGFB-202ENST00000426086 TEX14Q8IWB6 1497 aa23.7■■□□□ 1.38
VEGFB-202ENST00000426086 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
VEGFB-202ENST00000426086 WDR7Q9Y4E6 1490 aa23.67■■□□□ 1.38
VEGFB-202ENST00000426086 ABCA8O94911 1581 aa23.57■■□□□ 1.36
VEGFB-202ENST00000426086 CD109Q6YHK3 1445 aa23.57■■□□□ 1.36
VEGFB-202ENST00000426086 MAGI3Q5TCQ9 1506 aa23.56■■□□□ 1.36
VEGFB-202ENST00000426086 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
VEGFB-202ENST00000426086 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
VEGFB-202ENST00000426086 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
VEGFB-202ENST00000426086 KIF21BO75037 1637 aa23.48■■□□□ 1.35
VEGFB-202ENST00000426086 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
VEGFB-202ENST00000426086 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
VEGFB-202ENST00000426086 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
VEGFB-202ENST00000426086 ARAP3Q8WWN8 1544 aa23.39■■□□□ 1.34
VEGFB-202ENST00000426086 ATP10BO94823 1461 aa23.38■■□□□ 1.33
VEGFB-202ENST00000426086 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
VEGFB-202ENST00000426086 ABCA9Q8IUA7 1624 aa23.31■■□□□ 1.32
VEGFB-202ENST00000426086 ADAMTSL3P82987 1691 aa23.31■■□□□ 1.32
VEGFB-202ENST00000426086 RAPGEF3O95398 923 aa23.3■■□□□ 1.32
VEGFB-202ENST00000426086 PTPRMP28827 1452 aa23.29■■□□□ 1.32
VEGFB-202ENST00000426086 FRMPD1Q5SYB0 1578 aa23.25■■□□□ 1.31
VEGFB-202ENST00000426086 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
VEGFB-202ENST00000426086 SAMD9Q5K651 1589 aa23.23■■□□□ 1.31
VEGFB-202ENST00000426086 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
VEGFB-202ENST00000426086 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
VEGFB-202ENST00000426086 BCORL1Q5H9F3 1711 aa23.2■■□□□ 1.3
VEGFB-202ENST00000426086 NEO1Q92859 1461 aa23.2■■□□□ 1.3
VEGFB-202ENST00000426086 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
VEGFB-202ENST00000426086 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
VEGFB-202ENST00000426086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
VEGFB-202ENST00000426086 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
VEGFB-202ENST00000426086 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
VEGFB-202ENST00000426086 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
VEGFB-202ENST00000426086 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
VEGFB-202ENST00000426086 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
VEGFB-202ENST00000426086 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
VEGFB-202ENST00000426086 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
VEGFB-202ENST00000426086 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
VEGFB-202ENST00000426086 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.29
VEGFB-202ENST00000426086 ARHGEF40Q8TER5 1519 aa23.08■■□□□ 1.29
VEGFB-202ENST00000426086 RICTORQ6R327 1708 aa23.08■■□□□ 1.28
VEGFB-202ENST00000426086 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
VEGFB-202ENST00000426086 DENND4BO75064 1496 aaPredicted RBP23.05■■□□□ 1.28
VEGFB-202ENST00000426086 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
VEGFB-202ENST00000426086 HSPA2P54652 639 aa23.03■■□□□ 1.28
VEGFB-202ENST00000426086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.281e-6■■■■□ 21.2
VEGFB-202ENST00000426086 FANCAO15360 1455 aa23.01■■□□□ 1.27
VEGFB-202ENST00000426086 YEATS2Q9ULM3 1422 aa23■■□□□ 1.27
VEGFB-202ENST00000426086 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
VEGFB-202ENST00000426086 PLPPR3Q6T4P5 718 aa23■■□□□ 1.27
VEGFB-202ENST00000426086 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
VEGFB-202ENST00000426086 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
VEGFB-202ENST00000426086 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
VEGFB-202ENST00000426086 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
VEGFB-202ENST00000426086 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
VEGFB-202ENST00000426086 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
VEGFB-202ENST00000426086 MLECQ14165 292 aa22.91■■□□□ 1.26
VEGFB-202ENST00000426086 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
VEGFB-202ENST00000426086 POGZQ7Z3K3 1410 aa22.89■■□□□ 1.25
VEGFB-202ENST00000426086 SCAPERQ9BY12 1400 aa22.86■■□□□ 1.25
VEGFB-202ENST00000426086 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
VEGFB-202ENST00000426086 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms