RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ARHGEF11O15085 1522 aa40.42■■■■■ 4.06
VEGFA-209ENST00000425836 KIF21BO75037 1637 aa40.34■■■■■ 4.05
VEGFA-209ENST00000425836 RIMBP3CA6NJZ7 1639 aa40.33■■■■■ 4.05
VEGFA-209ENST00000425836 RIMBP3BA6NNM3 1639 aa40.33■■■■■ 4.05
VEGFA-209ENST00000425836 SHROOM2Q13796 1616 aa40.33■■■■■ 4.05
VEGFA-209ENST00000425836 RIMBP3Q9UFD9 1639 aa40.33■■■■■ 4.05
VEGFA-209ENST00000425836 PRG4Q92954 1404 aaPredicted RBP40.27■■■■■ 4.04
VEGFA-209ENST00000425836 IQGAP2Q13576 1575 aa40.26■■■■■ 4.04
VEGFA-209ENST00000425836 EHMT2Q96KQ7 1210 aa40.24■■■■■ 4.03
VEGFA-209ENST00000425836 ERCC6L2Q5T890 1561 aa40.22■■■■■ 4.03
VEGFA-209ENST00000425836 GOLGA3Q08378 1498 aa40.19■■■■■ 4.02
VEGFA-209ENST00000425836 CTTNBP2Q8WZ74 1663 aa40.15■■■■■ 4.02
VEGFA-209ENST00000425836 ARAP1Q96P48 1450 aa40.15■■■■■ 4.02
VEGFA-209ENST00000425836 UBTFP17480 764 aaKnown RBP40.11■■■■■ 4.01
VEGFA-209ENST00000425836 CYB5RLQ6IPT4 315 aa40.11■■■■■ 4.01
VEGFA-209ENST00000425836 UGGT2Q9NYU1 1516 aa40.09■■■■■ 4.01
VEGFA-209ENST00000425836 CARMIL2Q6F5E8 1435 aa40.03■■■■■ 4
VEGFA-209ENST00000425836 DISP1Q96F81 1524 aa40.02■■■■■ 4
VEGFA-209ENST00000425836 RANGAP1P46060 587 aaPredicted RBP39.91■■■■□ 3.98
VEGFA-209ENST00000425836 TNIKQ9UKE5 1360 aa39.9■■■■□ 3.98
VEGFA-209ENST00000425836 KIAA0556O60303 1618 aa39.88■■■■□ 3.97
VEGFA-209ENST00000425836 PTPRGP23470 1445 aa39.85■■■■□ 3.97
VEGFA-209ENST00000425836 TTBK1Q5TCY1 1321 aaPredicted RBP39.83■■■■□ 3.97
VEGFA-209ENST00000425836 P3H3Q8IVL6 736 aa39.8■■■■□ 3.96
VEGFA-209ENST00000425836 LOC105371045A0A1W2PR82 267 aa39.79■■■■□ 3.96
VEGFA-209ENST00000425836 SAMD9Q5K651 1589 aa39.75■■■■□ 3.95
VEGFA-209ENST00000425836 EFCAB5A4FU69 1503 aa39.66■■■■□ 3.94
VEGFA-209ENST00000425836 FHOD3Q2V2M9 1422 aa39.62■■■■□ 3.93
VEGFA-209ENST00000425836 ARHGAP35Q9NRY4 1499 aa39.59■■■■□ 3.93
VEGFA-209ENST00000425836 UACAQ9BZF9 1416 aa39.59■■■■□ 3.93
VEGFA-209ENST00000425836 ADCY10Q96PN6 1610 aa39.53■■■■□ 3.92
VEGFA-209ENST00000425836 PLB1Q6P1J6 1458 aa39.52■■■■□ 3.92
VEGFA-209ENST00000425836 CLIP1P30622 1438 aa39.5■■■■□ 3.91
VEGFA-209ENST00000425836 UHRF1BP1LA0JNW5 1464 aa39.5■■■■□ 3.91
VEGFA-209ENST00000425836 ABCC2Q92887 1545 aa39.46■■■■□ 3.91
VEGFA-209ENST00000425836 ABCA8O94911 1581 aa39.44■■■■□ 3.9
VEGFA-209ENST00000425836 NPM1P06748 294 aaKnown RBP eCLIP39.44■■■■□ 3.9
VEGFA-209ENST00000425836 CEP162Q5TB80 1403 aa39.43■■■■□ 3.9
VEGFA-209ENST00000425836 FMN1Q68DA7 1419 aa39.34■■■■□ 3.89
VEGFA-209ENST00000425836 KDM5BQ9UGL1 1544 aa39.32■■■■□ 3.88
VEGFA-209ENST00000425836 RAPGEF6Q8TEU7 1601 aa39.27■■■■□ 3.88
VEGFA-209ENST00000425836 ARID3CA6NKF2 412 aa39.23■■■■□ 3.87
VEGFA-209ENST00000425836 NUP153P49790 1475 aaKnown RBP39.21■■■■□ 3.87
VEGFA-209ENST00000425836 MAPKBP1O60336 1514 aa39.21■■■■□ 3.87
VEGFA-209ENST00000425836 ATP10BO94823 1461 aa39.18■■■■□ 3.86
VEGFA-209ENST00000425836 ZCCHC11Q5TAX3 1644 aaKnown RBP39.16■■■■□ 3.86
VEGFA-209ENST00000425836 ATP1B4Q9UN42 357 aaPredicted RBP39.14■■■■□ 3.86
VEGFA-209ENST00000425836 ASXL2Q76L83 1435 aa39.13■■■■□ 3.86
VEGFA-209ENST00000425836 TRHP20396 242 aaPredicted RBP39.13■■■■□ 3.85
VEGFA-209ENST00000425836 CASKIN1Q8WXD9 1431 aa39.09■■■■□ 3.85
VEGFA-209ENST00000425836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.07■■■■□ 3.84
VEGFA-209ENST00000425836 HNRNPUL2Q1KMD3 747 aaKnown RBP39.07■■■■□ 3.84
VEGFA-209ENST00000425836 HECW1Q76N89 1606 aa39.03■■■■□ 3.84
VEGFA-209ENST00000425836 PCF11O94913 1555 aaKnown RBP39.02■■■■□ 3.84
VEGFA-209ENST00000425836 ABCC10Q5T3U5 1492 aa39.01■■■■□ 3.84
VEGFA-209ENST00000425836 EPRSP07814 1512 aaKnown RBP38.99■■■■□ 3.83
VEGFA-209ENST00000425836 FYCO1Q9BQS8 1478 aa38.98■■■■□ 3.83
VEGFA-209ENST00000425836 WDR7Q9Y4E6 1490 aa38.98■■■■□ 3.83
VEGFA-209ENST00000425836 FAM69CQ0P6D2 419 aa38.97■■■■□ 3.83
VEGFA-209ENST00000425836 CDK13Q14004 1512 aaKnown RBP38.96■■■■□ 3.83
VEGFA-209ENST00000425836 VPS8Q8N3P4 1428 aa38.92■■■■□ 3.82
VEGFA-209ENST00000425836 DIP2BQ9P265 1576 aa38.91■■■■□ 3.82
VEGFA-209ENST00000425836 PLEKHD1A6NEE1 506 aa38.91■■■■□ 3.82
VEGFA-209ENST00000425836 KCNH8Q96L42 1107 aa38.9■■■■□ 3.82
VEGFA-209ENST00000425836 CCDC18Q5T9S5 1454 aa38.84■■■■□ 3.81
VEGFA-209ENST00000425836 CDK11AQ9UQ88 783 aaPredicted RBP38.82■■■■□ 3.81
VEGFA-209ENST00000425836 LRRIQ1Q96JM4 1722 aa38.81■■■■□ 3.8
VEGFA-209ENST00000425836 KIF13AQ9H1H9 1805 aa38.8■■■■□ 3.8
VEGFA-209ENST00000425836 GLI2P10070 1586 aa38.79■■■■□ 3.8
VEGFA-209ENST00000425836 TROQ12816 1431 aaPredicted RBP38.69■■■■□ 3.78
VEGFA-209ENST00000425836 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.77
VEGFA-209ENST00000425836 CD109Q6YHK3 1445 aa38.61■■■■□ 3.77
VEGFA-209ENST00000425836 MAP3K4Q9Y6R4 1608 aa38.59■■■■□ 3.77
VEGFA-209ENST00000425836 ABCA9Q8IUA7 1624 aa38.56■■■■□ 3.76
VEGFA-209ENST00000425836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.54■■■■□ 3.762e-6■■□□□ 11.9
VEGFA-209ENST00000425836 MTUS2Q5JR59 1369 aa38.54■■■■□ 3.76
VEGFA-209ENST00000425836 CFAP43Q8NDM7 1665 aa38.53■■■■□ 3.76
VEGFA-209ENST00000425836 TIAM1Q13009 1591 aa38.52■■■■□ 3.76
VEGFA-209ENST00000425836 MAP3K1Q13233 1512 aa38.5■■■■□ 3.75
VEGFA-209ENST00000425836 APLP2Q06481 763 aa38.48■■■■□ 3.75
VEGFA-209ENST00000425836 KIF14Q15058 1648 aa38.48■■■■□ 3.75
VEGFA-209ENST00000425836 TSPOAP1O95153 1857 aa38.48■■■■□ 3.75
VEGFA-209ENST00000425836 TTC37Q6PGP7 1564 aa38.46■■■■□ 3.75
VEGFA-209ENST00000425836 PPRC1Q5VV67 1664 aaKnown RBP38.46■■■■□ 3.75
VEGFA-209ENST00000425836 KANK4Q5T7N3 995 aaPredicted RBP38.44■■■■□ 3.74
VEGFA-209ENST00000425836 TEX14Q8IWB6 1497 aa38.42■■■■□ 3.74
VEGFA-209ENST00000425836 EHBP1L1Q8N3D4 1523 aa38.42■■■■□ 3.74
VEGFA-209ENST00000425836 LRRC9Q6ZRR7 1453 aa38.4■■■■□ 3.74
VEGFA-209ENST00000425836 PLCH2O75038 1416 aa38.36■■■■□ 3.73
VEGFA-209ENST00000425836 NEO1Q92859 1461 aa38.26■■■■□ 3.71
VEGFA-209ENST00000425836 FANCAO15360 1455 aa38.25■■■■□ 3.71
VEGFA-209ENST00000425836 CCNB3Q8WWL7 1395 aa38.25■■■■□ 3.71
VEGFA-209ENST00000425836 EFCAB2Q5VUJ9 269 aa38.24■■■■□ 3.71
VEGFA-209ENST00000425836 NCOA2Q15596 1464 aa38.24■■■■□ 3.71
VEGFA-209ENST00000425836 PHLDB1Q86UU1 1377 aa38.24■■■■□ 3.71
VEGFA-209ENST00000425836 ARAP3Q8WWN8 1544 aa38.23■■■■□ 3.71
VEGFA-209ENST00000425836 GPATCH8Q9UKJ3 1502 aaKnown RBP38.23■■■■□ 3.71
VEGFA-209ENST00000425836 MYO5CQ9NQX4 1742 aa38.21■■■■□ 3.71
VEGFA-209ENST00000425836 COL17A1Q9UMD9 1497 aaPredicted RBP38.21■■■■□ 3.71
VEGFA-209ENST00000425836 SUPT6HQ7KZ85 1726 aaKnown RBP38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms