RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 TRHP20396 242 aaPredicted RBP37.07■■■■□ 3.52
CDCP1-202ENST00000425231 PRG4Q92954 1404 aaPredicted RBP37.06■■■■□ 3.52
CDCP1-202ENST00000425231 CARMIL1Q5VZK9 1371 aa37.03■■■■□ 3.52
CDCP1-202ENST00000425231 KIAA0586Q9BVV6 1533 aa36.98■■■■□ 3.51
CDCP1-202ENST00000425231 RAPGEF2Q9Y4G8 1499 aa36.74■■■■□ 3.47
CDCP1-202ENST00000425231 IQGAP2Q13576 1575 aa36.66■■■■□ 3.46
CDCP1-202ENST00000425231 CARMIL2Q6F5E8 1435 aa36.57■■■■□ 3.44
CDCP1-202ENST00000425231 ADCY10Q96PN6 1610 aa36.57■■■■□ 3.44
CDCP1-202ENST00000425231 PTPRGP23470 1445 aa36.55■■■■□ 3.44
CDCP1-202ENST00000425231 TNIKQ9UKE5 1360 aa36.51■■■■□ 3.44
CDCP1-202ENST00000425231 NPM1P06748 294 aaKnown RBP eCLIP36.51■■■■□ 3.43
CDCP1-202ENST00000425231 DISP1Q96F81 1524 aa36.5■■■■□ 3.43
CDCP1-202ENST00000425231 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
CDCP1-202ENST00000425231 UGGT2Q9NYU1 1516 aa36.48■■■■□ 3.43
CDCP1-202ENST00000425231 TTBK1Q5TCY1 1321 aaPredicted RBP36.45■■■■□ 3.42
CDCP1-202ENST00000425231 MAPKBP1O60336 1514 aa36.44■■■■□ 3.42
CDCP1-202ENST00000425231 KIF13AQ9H1H9 1805 aa36.43■■■■□ 3.42
CDCP1-202ENST00000425231 CTTNBP2Q8WZ74 1663 aa36.38■■■■□ 3.41
CDCP1-202ENST00000425231 ABCC10Q5T3U5 1492 aa36.35■■■■□ 3.41
CDCP1-202ENST00000425231 CSRNP3Q8WYN3 585 aa36.34■■■■□ 3.41
CDCP1-202ENST00000425231 KIAA0556O60303 1618 aa36.33■■■■□ 3.41
CDCP1-202ENST00000425231 FAM69CQ0P6D2 419 aa36.3■■■■□ 3.4
CDCP1-202ENST00000425231 UHRF1BP1LA0JNW5 1464 aa36.29■■■■□ 3.4
CDCP1-202ENST00000425231 ABCC2Q92887 1545 aa36.29■■■■□ 3.4
CDCP1-202ENST00000425231 UACAQ9BZF9 1416 aa36.28■■■■□ 3.4
CDCP1-202ENST00000425231 DIP2BQ9P265 1576 aa36.26■■■■□ 3.4
CDCP1-202ENST00000425231 EEA1Q15075 1411 aa36.23■■■■□ 3.39
CDCP1-202ENST00000425231 GOLGA3Q08378 1498 aa36.19■■■■□ 3.38
CDCP1-202ENST00000425231 KDM5BQ9UGL1 1544 aa36.12■■■■□ 3.37
CDCP1-202ENST00000425231 ASXL2Q76L83 1435 aa36.11■■■■□ 3.37
CDCP1-202ENST00000425231 CHIC1Q5VXU3 224 aa36.08■■■■□ 3.37
CDCP1-202ENST00000425231 PLB1Q6P1J6 1458 aa36.08■■■■□ 3.37
CDCP1-202ENST00000425231 FAM9AQ8IZU1 332 aaPredicted RBP36.08■■■■□ 3.37
CDCP1-202ENST00000425231 ZCCHC11Q5TAX3 1644 aaKnown RBP36.02■■■■□ 3.36
CDCP1-202ENST00000425231 ABCA8O94911 1581 aa35.99■■■■□ 3.35
CDCP1-202ENST00000425231 TSPOAP1O95153 1857 aa35.97■■■■□ 3.35
CDCP1-202ENST00000425231 GLI2P10070 1586 aa35.97■■■■□ 3.35
CDCP1-202ENST00000425231 P3H3Q8IVL6 736 aa35.95■■■■□ 3.35
CDCP1-202ENST00000425231 SAMD9Q5K651 1589 aa35.92■■■■□ 3.34
CDCP1-202ENST00000425231 KIF21BO75037 1637 aa35.9■■■■□ 3.34
CDCP1-202ENST00000425231 EPRSP07814 1512 aaKnown RBP35.9■■■■□ 3.34
CDCP1-202ENST00000425231 WDR7Q9Y4E6 1490 aa35.82■■■■□ 3.33
CDCP1-202ENST00000425231 PPRC1Q5VV67 1664 aaKnown RBP35.82■■■■□ 3.33
CDCP1-202ENST00000425231 KDM6BO15054 1643 aa35.8■■■■□ 3.32
CDCP1-202ENST00000425231 MAP3K4Q9Y6R4 1608 aa35.78■■■■□ 3.32
CDCP1-202ENST00000425231 RANGAP1P46060 587 aaPredicted RBP35.78■■■■□ 3.32
CDCP1-202ENST00000425231 ATP10BO94823 1461 aa35.72■■■■□ 3.31
CDCP1-202ENST00000425231 ARID3CA6NKF2 412 aa35.68■■■■□ 3.3
CDCP1-202ENST00000425231 FHOD3Q2V2M9 1422 aa35.68■■■■□ 3.3
CDCP1-202ENST00000425231 KCNH8Q96L42 1107 aa35.67■■■■□ 3.3
CDCP1-202ENST00000425231 RAPGEF6Q8TEU7 1601 aa35.67■■■■□ 3.3
CDCP1-202ENST00000425231 EHMT2Q96KQ7 1210 aa35.65■■■■□ 3.3
CDCP1-202ENST00000425231 EFCAB5A4FU69 1503 aa35.63■■■■□ 3.29
CDCP1-202ENST00000425231 UBTFP17480 764 aaKnown RBP35.63■■■■□ 3.29
CDCP1-202ENST00000425231 TEX14Q8IWB6 1497 aa35.62■■■■□ 3.29
CDCP1-202ENST00000425231 AEBP2Q6ZN18 517 aaPredicted RBP35.58■■■■□ 3.29
CDCP1-202ENST00000425231 COL17A1Q9UMD9 1497 aaPredicted RBP35.58■■■■□ 3.29
CDCP1-202ENST00000425231 CD109Q6YHK3 1445 aa35.58■■■■□ 3.29
CDCP1-202ENST00000425231 CFAP43Q8NDM7 1665 aa35.57■■■■□ 3.29
CDCP1-202ENST00000425231 NUP153P49790 1475 aaKnown RBP35.57■■■■□ 3.28
CDCP1-202ENST00000425231 MAGI3Q5TCQ9 1506 aa35.53■■■■□ 3.28
CDCP1-202ENST00000425231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.48■■■■□ 3.27
CDCP1-202ENST00000425231 HNRNPUL2Q1KMD3 747 aaKnown RBP35.48■■■■□ 3.27
CDCP1-202ENST00000425231 ARHGAP35Q9NRY4 1499 aa35.41■■■■□ 3.26
CDCP1-202ENST00000425231 ABCA9Q8IUA7 1624 aa35.41■■■■□ 3.26
CDCP1-202ENST00000425231 PLEKHD1A6NEE1 506 aa35.33■■■■□ 3.25
CDCP1-202ENST00000425231 FMN1Q68DA7 1419 aa35.32■■■■□ 3.24
CDCP1-202ENST00000425231 KDM4FA0A1W2PPD8 638 aa35.32■■■■□ 3.24
CDCP1-202ENST00000425231 CDK13Q14004 1512 aaKnown RBP35.25■■■■□ 3.23
CDCP1-202ENST00000425231 ARAP3Q8WWN8 1544 aa35.25■■■■□ 3.23
CDCP1-202ENST00000425231 PHLDB1Q86UU1 1377 aa35.21■■■■□ 3.23
CDCP1-202ENST00000425231 HECW1Q76N89 1606 aa35.19■■■■□ 3.22
CDCP1-202ENST00000425231 ATP1B4Q9UN42 357 aaPredicted RBP35.19■■■■□ 3.22
CDCP1-202ENST00000425231 NEO1Q92859 1461 aa35.18■■■■□ 3.22
CDCP1-202ENST00000425231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.16■■■■□ 3.22
CDCP1-202ENST00000425231 ADGRL1O94910 1474 aa35.09■■■■□ 3.21
CDCP1-202ENST00000425231 TTC37Q6PGP7 1564 aa35.09■■■■□ 3.21
CDCP1-202ENST00000425231 RAPGEF3O95398 923 aa35.06■■■■□ 3.2
CDCP1-202ENST00000425231 LRRIQ1Q96JM4 1722 aa35.04■■■■□ 3.2
CDCP1-202ENST00000425231 CDK11AQ9UQ88 783 aaPredicted RBP35.04■■■■□ 3.2
CDCP1-202ENST00000425231 FANCAO15360 1455 aa35.01■■■■□ 3.2
CDCP1-202ENST00000425231 CLIP1P30622 1438 aa35■■■■□ 3.19
CDCP1-202ENST00000425231 CASKIN1Q8WXD9 1431 aa35■■■■□ 3.19
CDCP1-202ENST00000425231 AKNAQ7Z591 1439 aa34.99■■■■□ 3.19
CDCP1-202ENST00000425231 PCF11O94913 1555 aaKnown RBP34.98■■■■□ 3.19
CDCP1-202ENST00000425231 FRMPD1Q5SYB0 1578 aa34.98■■■■□ 3.19
CDCP1-202ENST00000425231 CFAP74Q9C0B2 1584 aa34.96■■■■□ 3.19
CDCP1-202ENST00000425231 PLCH2O75038 1416 aa34.95■■■■□ 3.19
CDCP1-202ENST00000425231 TROQ12816 1431 aaPredicted RBP34.95■■■■□ 3.19
CDCP1-202ENST00000425231 DENND4BO75064 1496 aaPredicted RBP34.92■■■■□ 3.18
CDCP1-202ENST00000425231 KIF14Q15058 1648 aa34.91■■■■□ 3.18
CDCP1-202ENST00000425231 CCDC18Q5T9S5 1454 aa34.89■■■■□ 3.18
CDCP1-202ENST00000425231 RICTORQ6R327 1708 aa34.89■■■■□ 3.18
CDCP1-202ENST00000425231 FYCO1Q9BQS8 1478 aa34.87■■■■□ 3.17
CDCP1-202ENST00000425231 MYO5CQ9NQX4 1742 aa34.85■■■■□ 3.17
CDCP1-202ENST00000425231 EFCAB2Q5VUJ9 269 aa34.81■■■■□ 3.16
CDCP1-202ENST00000425231 SCAPERQ9BY12 1400 aa34.78■■■■□ 3.16
CDCP1-202ENST00000425231 ZMYM4Q5VZL5 1548 aa34.75■■■■□ 3.15
CDCP1-202ENST00000425231 ARHGEF40Q8TER5 1519 aa34.72■■■■□ 3.15
CDCP1-202ENST00000425231 CEP162Q5TB80 1403 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 1174.6 ms