RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 SHROOM2Q13796 1616 aa36.27■■■■□ 3.4
HMGA2-205ENST00000425208 RIMBP3CA6NJZ7 1639 aa36.27■■■■□ 3.4
HMGA2-205ENST00000425208 RIMBP3BA6NNM3 1639 aa36.27■■■■□ 3.4
HMGA2-205ENST00000425208 RIMBP3Q9UFD9 1639 aa36.27■■■■□ 3.4
HMGA2-205ENST00000425208 KIF21BO75037 1637 aa36.26■■■■□ 3.4
HMGA2-205ENST00000425208 CTTNBP2Q8WZ74 1663 aa36.21■■■■□ 3.39
HMGA2-205ENST00000425208 IQGAP2Q13576 1575 aa36.2■■■■□ 3.39
HMGA2-205ENST00000425208 JPH4Q96JJ6 628 aa36.17■■■■□ 3.38
HMGA2-205ENST00000425208 PRG4Q92954 1404 aaPredicted RBP36.1■■■■□ 3.37
HMGA2-205ENST00000425208 ERCC6L2Q5T890 1561 aa36.07■■■■□ 3.36
HMGA2-205ENST00000425208 GOLGA3Q08378 1498 aa36.06■■■■□ 3.36
HMGA2-205ENST00000425208 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
HMGA2-205ENST00000425208 UGGT2Q9NYU1 1516 aa35.99■■■■□ 3.35
HMGA2-205ENST00000425208 EHMT2Q96KQ7 1210 aa35.96■■■■□ 3.35
HMGA2-205ENST00000425208 CARMIL2Q6F5E8 1435 aa35.93■■■■□ 3.34
HMGA2-205ENST00000425208 UBTFP17480 764 aaKnown RBP35.9■■■■□ 3.34
HMGA2-205ENST00000425208 CYB5RLQ6IPT4 315 aa35.9■■■■□ 3.34
HMGA2-205ENST00000425208 DISP1Q96F81 1524 aa35.88■■■■□ 3.33
HMGA2-205ENST00000425208 KIAA0556O60303 1618 aa35.85■■■■□ 3.33
HMGA2-205ENST00000425208 TNIKQ9UKE5 1360 aa35.77■■■■□ 3.32
HMGA2-205ENST00000425208 SAMD9Q5K651 1589 aa35.73■■■■□ 3.31
HMGA2-205ENST00000425208 PTPRGP23470 1445 aa35.7■■■■□ 3.31
HMGA2-205ENST00000425208 RANGAP1P46060 587 aaPredicted RBP35.69■■■■□ 3.3
HMGA2-205ENST00000425208 EFCAB5A4FU69 1503 aa35.65■■■■□ 3.3
HMGA2-205ENST00000425208 TTBK1Q5TCY1 1321 aaPredicted RBP35.64■■■■□ 3.3
HMGA2-205ENST00000425208 P3H3Q8IVL6 736 aa35.57■■■■□ 3.29
HMGA2-205ENST00000425208 ADCY10Q96PN6 1610 aa35.53■■■■□ 3.28
HMGA2-205ENST00000425208 FHOD3Q2V2M9 1422 aa35.5■■■■□ 3.27
HMGA2-205ENST00000425208 UACAQ9BZF9 1416 aa35.49■■■■□ 3.27
HMGA2-205ENST00000425208 LOC105371045A0A1W2PR82 267 aa35.49■■■■□ 3.27
HMGA2-205ENST00000425208 ARHGAP35Q9NRY4 1499 aa35.48■■■■□ 3.27
HMGA2-205ENST00000425208 ABCC2Q92887 1545 aa35.45■■■■□ 3.27
HMGA2-205ENST00000425208 UHRF1BP1LA0JNW5 1464 aa35.45■■■■□ 3.26
HMGA2-205ENST00000425208 PLB1Q6P1J6 1458 aa35.42■■■■□ 3.26
HMGA2-205ENST00000425208 ABCA8O94911 1581 aa35.41■■■■□ 3.26
HMGA2-205ENST00000425208 CLIP1P30622 1438 aa35.4■■■■□ 3.26
HMGA2-205ENST00000425208 NPM1P06748 294 aaKnown RBP eCLIP35.35■■■■□ 3.25
HMGA2-205ENST00000425208 CEP162Q5TB80 1403 aa35.34■■■■□ 3.25
HMGA2-205ENST00000425208 RAPGEF6Q8TEU7 1601 aa35.32■■■■□ 3.24
HMGA2-205ENST00000425208 FMN1Q68DA7 1419 aa35.3■■■■□ 3.24
HMGA2-205ENST00000425208 KDM5BQ9UGL1 1544 aa35.27■■■■□ 3.24
HMGA2-205ENST00000425208 MAPKBP1O60336 1514 aa35.24■■■■□ 3.23
HMGA2-205ENST00000425208 ZCCHC11Q5TAX3 1644 aaKnown RBP35.23■■■■□ 3.23
HMGA2-205ENST00000425208 NUP153P49790 1475 aaKnown RBP35.16■■■■□ 3.22
HMGA2-205ENST00000425208 HECW1Q76N89 1606 aa35.13■■■■□ 3.21
HMGA2-205ENST00000425208 ASXL2Q76L83 1435 aa35.1■■■■□ 3.21
HMGA2-205ENST00000425208 ARID3CA6NKF2 412 aa35.09■■■■□ 3.21
HMGA2-205ENST00000425208 ATP10BO94823 1461 aa35.09■■■■□ 3.21
HMGA2-205ENST00000425208 PCF11O94913 1555 aaKnown RBP35.08■■■■□ 3.21
HMGA2-205ENST00000425208 TRHP20396 242 aaPredicted RBP35.06■■■■□ 3.2
HMGA2-205ENST00000425208 CASKIN1Q8WXD9 1431 aa35.04■■■■□ 3.2
HMGA2-205ENST00000425208 ATP1B4Q9UN42 357 aaPredicted RBP35.03■■■■□ 3.2
HMGA2-205ENST00000425208 FYCO1Q9BQS8 1478 aa35.01■■■■□ 3.2
HMGA2-205ENST00000425208 ABCC10Q5T3U5 1492 aa35■■■■□ 3.19
HMGA2-205ENST00000425208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35■■■■□ 3.19
HMGA2-205ENST00000425208 HNRNPUL2Q1KMD3 747 aaKnown RBP35■■■■□ 3.19
HMGA2-205ENST00000425208 WDR7Q9Y4E6 1490 aa35■■■■□ 3.19
HMGA2-205ENST00000425208 DIP2BQ9P265 1576 aa34.99■■■■□ 3.19
HMGA2-205ENST00000425208 KIF13AQ9H1H9 1805 aa34.98■■■■□ 3.19
HMGA2-205ENST00000425208 EPRSP07814 1512 aaKnown RBP34.98■■■■□ 3.19
HMGA2-205ENST00000425208 CDK13Q14004 1512 aaKnown RBP34.96■■■■□ 3.19
HMGA2-205ENST00000425208 LRRIQ1Q96JM4 1722 aa34.94■■■■□ 3.18
HMGA2-205ENST00000425208 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
HMGA2-205ENST00000425208 VPS8Q8N3P4 1428 aa34.9■■■■□ 3.18
HMGA2-205ENST00000425208 FAM69CQ0P6D2 419 aa34.89■■■■□ 3.18
HMGA2-205ENST00000425208 GLI2P10070 1586 aa34.85■■■■□ 3.17
HMGA2-205ENST00000425208 PLEKHD1A6NEE1 506 aa34.83■■■■□ 3.17
HMGA2-205ENST00000425208 KCNH8Q96L42 1107 aa34.8■■■■□ 3.16
HMGA2-205ENST00000425208 CDK11AQ9UQ88 783 aaPredicted RBP34.8■■■■□ 3.16
HMGA2-205ENST00000425208 MAP3K4Q9Y6R4 1608 aa34.72■■■■□ 3.15
HMGA2-205ENST00000425208 CFAP43Q8NDM7 1665 aa34.71■■■■□ 3.15
HMGA2-205ENST00000425208 TSPOAP1O95153 1857 aa34.7■■■■□ 3.15
HMGA2-205ENST00000425208 TROQ12816 1431 aaPredicted RBP34.68■■■■□ 3.14
HMGA2-205ENST00000425208 ABCA9Q8IUA7 1624 aa34.68■■■■□ 3.14
HMGA2-205ENST00000425208 MAGI3Q5TCQ9 1506 aa34.64■■■■□ 3.14
HMGA2-205ENST00000425208 KIF14Q15058 1648 aa34.63■■■■□ 3.13
HMGA2-205ENST00000425208 CD109Q6YHK3 1445 aa34.61■■■■□ 3.13
HMGA2-205ENST00000425208 TIAM1Q13009 1591 aa34.61■■■■□ 3.13
HMGA2-205ENST00000425208 PPRC1Q5VV67 1664 aaKnown RBP34.6■■■■□ 3.13
HMGA2-205ENST00000425208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.6■■■■□ 3.13
HMGA2-205ENST00000425208 TTC37Q6PGP7 1564 aa34.57■■■■□ 3.12
HMGA2-205ENST00000425208 MTUS2Q5JR59 1369 aa34.56■■■■□ 3.12
HMGA2-205ENST00000425208 MAP3K1Q13233 1512 aa34.55■■■■□ 3.12
HMGA2-205ENST00000425208 TEX14Q8IWB6 1497 aa34.54■■■■□ 3.12
HMGA2-205ENST00000425208 EHBP1L1Q8N3D4 1523 aa34.54■■■■□ 3.12
HMGA2-205ENST00000425208 APLP2Q06481 763 aa34.49■■■■□ 3.11
HMGA2-205ENST00000425208 MYO5CQ9NQX4 1742 aa34.46■■■■□ 3.11
HMGA2-205ENST00000425208 LRRC9Q6ZRR7 1453 aa34.43■■■■□ 3.1
HMGA2-205ENST00000425208 SUPT6HQ7KZ85 1726 aaKnown RBP34.38■■■■□ 3.09
HMGA2-205ENST00000425208 PLCH2O75038 1416 aa34.38■■■■□ 3.09
HMGA2-205ENST00000425208 CFAP74Q9C0B2 1584 aa34.36■■■■□ 3.09
HMGA2-205ENST00000425208 ARAP3Q8WWN8 1544 aa34.36■■■■□ 3.09
HMGA2-205ENST00000425208 KDM6BO15054 1643 aa34.35■■■■□ 3.09
HMGA2-205ENST00000425208 PREX2Q70Z35 1606 aa34.34■■■■□ 3.09
HMGA2-205ENST00000425208 NEO1Q92859 1461 aa34.34■■■■□ 3.09
HMGA2-205ENST00000425208 FANCAO15360 1455 aa34.33■■■■□ 3.09
HMGA2-205ENST00000425208 CDC42BPAQ5VT25 1732 aa34.33■■■■□ 3.09
HMGA2-205ENST00000425208 KANK4Q5T7N3 995 aaPredicted RBP34.32■■■■□ 3.08
HMGA2-205ENST00000425208 ARHGAP5Q13017 1502 aa34.3■■■■□ 3.08
HMGA2-205ENST00000425208 PHLDB1Q86UU1 1377 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms