RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 NUP160Q12769 1436 aa19.12■□□□□ 0.65
POLR1B-205ENST00000424062 CEP170Q5SW79 1584 aa19.1■□□□□ 0.65
POLR1B-205ENST00000424062 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
POLR1B-205ENST00000424062 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
POLR1B-205ENST00000424062 CTTNBP2Q8WZ74 1663 aa19.07■□□□□ 0.64
POLR1B-205ENST00000424062 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
POLR1B-205ENST00000424062 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
POLR1B-205ENST00000424062 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
POLR1B-205ENST00000424062 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
POLR1B-205ENST00000424062 CLIP1P30622 1438 aa18.97■□□□□ 0.63
POLR1B-205ENST00000424062 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
POLR1B-205ENST00000424062 P3H3Q8IVL6 736 aa18.94■□□□□ 0.62
POLR1B-205ENST00000424062 CARMIL2Q6F5E8 1435 aa18.93■□□□□ 0.62
POLR1B-205ENST00000424062 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
POLR1B-205ENST00000424062 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
POLR1B-205ENST00000424062 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
POLR1B-205ENST00000424062 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
POLR1B-205ENST00000424062 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
POLR1B-205ENST00000424062 DISP1Q96F81 1524 aa18.85■□□□□ 0.61
POLR1B-205ENST00000424062 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
POLR1B-205ENST00000424062 TTBK1Q5TCY1 1321 aaPredicted RBP18.83■□□□□ 0.61
POLR1B-205ENST00000424062 FHOD3Q2V2M9 1422 aa18.82■□□□□ 0.6
POLR1B-205ENST00000424062 KIAA0556O60303 1618 aa18.82■□□□□ 0.6
POLR1B-205ENST00000424062 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
POLR1B-205ENST00000424062 PTPRGP23470 1445 aa18.79■□□□□ 0.6
POLR1B-205ENST00000424062 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
POLR1B-205ENST00000424062 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
POLR1B-205ENST00000424062 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
POLR1B-205ENST00000424062 VPS8Q8N3P4 1428 aa18.72■□□□□ 0.59
POLR1B-205ENST00000424062 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
POLR1B-205ENST00000424062 APLP2Q06481 763 aa18.67■□□□□ 0.58
POLR1B-205ENST00000424062 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
POLR1B-205ENST00000424062 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
POLR1B-205ENST00000424062 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
POLR1B-205ENST00000424062 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
POLR1B-205ENST00000424062 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
POLR1B-205ENST00000424062 UACAQ9BZF9 1416 aa18.65■□□□□ 0.58
POLR1B-205ENST00000424062 PLB1Q6P1J6 1458 aa18.62■□□□□ 0.57
POLR1B-205ENST00000424062 FYCO1Q9BQS8 1478 aa18.61■□□□□ 0.57
POLR1B-205ENST00000424062 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
POLR1B-205ENST00000424062 ABCA8O94911 1581 aa18.59■□□□□ 0.57
POLR1B-205ENST00000424062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.59■□□□□ 0.57
POLR1B-205ENST00000424062 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
POLR1B-205ENST00000424062 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
POLR1B-205ENST00000424062 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.56
POLR1B-205ENST00000424062 PCF11O94913 1555 aaKnown RBP18.58■□□□□ 0.56
POLR1B-205ENST00000424062 UHRF1BP1LA0JNW5 1464 aa18.57■□□□□ 0.56
POLR1B-205ENST00000424062 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
POLR1B-205ENST00000424062 ABCC2Q92887 1545 aa18.54■□□□□ 0.56
POLR1B-205ENST00000424062 CDK11AQ9UQ88 783 aaPredicted RBP18.54■□□□□ 0.56
POLR1B-205ENST00000424062 NUP153P49790 1475 aaKnown RBP18.53■□□□□ 0.56
POLR1B-205ENST00000424062 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
POLR1B-205ENST00000424062 EPRSP07814 1512 aaKnown RBP18.52■□□□□ 0.56
POLR1B-205ENST00000424062 ATP10BO94823 1461 aa18.5■□□□□ 0.55
POLR1B-205ENST00000424062 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
POLR1B-205ENST00000424062 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
POLR1B-205ENST00000424062 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
POLR1B-205ENST00000424062 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
POLR1B-205ENST00000424062 KDM5BQ9UGL1 1544 aa18.45■□□□□ 0.54
POLR1B-205ENST00000424062 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
POLR1B-205ENST00000424062 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
POLR1B-205ENST00000424062 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
POLR1B-205ENST00000424062 LRRIQ1Q96JM4 1722 aa18.43■□□□□ 0.54
POLR1B-205ENST00000424062 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
POLR1B-205ENST00000424062 ZCCHC11Q5TAX3 1644 aaKnown RBP18.41■□□□□ 0.54
POLR1B-205ENST00000424062 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
POLR1B-205ENST00000424062 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.54
POLR1B-205ENST00000424062 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
POLR1B-205ENST00000424062 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
POLR1B-205ENST00000424062 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
POLR1B-205ENST00000424062 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
POLR1B-205ENST00000424062 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
POLR1B-205ENST00000424062 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
POLR1B-205ENST00000424062 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
POLR1B-205ENST00000424062 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
POLR1B-205ENST00000424062 NCOA2Q15596 1464 aa18.26■□□□□ 0.51
POLR1B-205ENST00000424062 KIF14Q15058 1648 aa18.25■□□□□ 0.51
POLR1B-205ENST00000424062 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
POLR1B-205ENST00000424062 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
POLR1B-205ENST00000424062 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
POLR1B-205ENST00000424062 PHLDB1Q86UU1 1377 aa18.18■□□□□ 0.5
POLR1B-205ENST00000424062 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
POLR1B-205ENST00000424062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
POLR1B-205ENST00000424062 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
POLR1B-205ENST00000424062 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
POLR1B-205ENST00000424062 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
POLR1B-205ENST00000424062 GLI2P10070 1586 aa18.14■□□□□ 0.49
POLR1B-205ENST00000424062 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
POLR1B-205ENST00000424062 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
POLR1B-205ENST00000424062 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
POLR1B-205ENST00000424062 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
POLR1B-205ENST00000424062 PLCH2O75038 1416 aa18.13■□□□□ 0.49
POLR1B-205ENST00000424062 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
POLR1B-205ENST00000424062 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
POLR1B-205ENST00000424062 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
POLR1B-205ENST00000424062 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
POLR1B-205ENST00000424062 MYO5CQ9NQX4 1742 aa18.1■□□□□ 0.49
POLR1B-205ENST00000424062 ITSN2Q9NZM3 1697 aa18.1■□□□□ 0.49
POLR1B-205ENST00000424062 DIP2BQ9P265 1576 aa18.1■□□□□ 0.49
POLR1B-205ENST00000424062 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms