RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
RPUSD3-203ENST00000423108 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
RPUSD3-203ENST00000423108 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.88
RPUSD3-203ENST00000423108 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
RPUSD3-203ENST00000423108 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
RPUSD3-203ENST00000423108 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
RPUSD3-203ENST00000423108 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
RPUSD3-203ENST00000423108 IQGAP2Q13576 1575 aa20.38■□□□□ 0.85
RPUSD3-203ENST00000423108 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
RPUSD3-203ENST00000423108 P3H3Q8IVL6 736 aa20.33■□□□□ 0.85
RPUSD3-203ENST00000423108 CEP162Q5TB80 1403 aa20.33■□□□□ 0.84
RPUSD3-203ENST00000423108 UGGT2Q9NYU1 1516 aa20.32■□□□□ 0.84
RPUSD3-203ENST00000423108 CLIP1P30622 1438 aa20.31■□□□□ 0.84
RPUSD3-203ENST00000423108 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
RPUSD3-203ENST00000423108 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
RPUSD3-203ENST00000423108 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
RPUSD3-203ENST00000423108 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
RPUSD3-203ENST00000423108 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
RPUSD3-203ENST00000423108 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
RPUSD3-203ENST00000423108 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
RPUSD3-203ENST00000423108 ARHGEF11O15085 1522 aa20.22■□□□□ 0.83
RPUSD3-203ENST00000423108 CARMIL2Q6F5E8 1435 aa20.21■□□□□ 0.83
RPUSD3-203ENST00000423108 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
RPUSD3-203ENST00000423108 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
RPUSD3-203ENST00000423108 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
RPUSD3-203ENST00000423108 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
RPUSD3-203ENST00000423108 EFCAB5A4FU69 1503 aa20.19■□□□□ 0.82
RPUSD3-203ENST00000423108 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
RPUSD3-203ENST00000423108 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-203ENST00000423108 PTPRGP23470 1445 aa20.13■□□□□ 0.81
RPUSD3-203ENST00000423108 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
RPUSD3-203ENST00000423108 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
RPUSD3-203ENST00000423108 PLB1Q6P1J6 1458 aa20.03■□□□□ 0.8
RPUSD3-203ENST00000423108 CYB5RLQ6IPT4 315 aa20.02■□□□□ 0.8
RPUSD3-203ENST00000423108 ATP1B4Q9UN42 357 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-203ENST00000423108 CASKIN1Q8WXD9 1431 aa19.99■□□□□ 0.79
RPUSD3-203ENST00000423108 UACAQ9BZF9 1416 aa19.99■□□□□ 0.79
RPUSD3-203ENST00000423108 ABCA8O94911 1581 aa19.98■□□□□ 0.79
RPUSD3-203ENST00000423108 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
RPUSD3-203ENST00000423108 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-203ENST00000423108 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
RPUSD3-203ENST00000423108 RAPGEF6Q8TEU7 1601 aa19.92■□□□□ 0.78
RPUSD3-203ENST00000423108 UHRF1BP1LA0JNW5 1464 aa19.92■□□□□ 0.78
RPUSD3-203ENST00000423108 FYCO1Q9BQS8 1478 aa19.91■□□□□ 0.78
RPUSD3-203ENST00000423108 ABCC2Q92887 1545 aa19.9■□□□□ 0.78
RPUSD3-203ENST00000423108 ATP10BO94823 1461 aa19.88■□□□□ 0.77
RPUSD3-203ENST00000423108 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
RPUSD3-203ENST00000423108 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
RPUSD3-203ENST00000423108 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
RPUSD3-203ENST00000423108 CDK13Q14004 1512 aaKnown RBP19.84■□□□□ 0.77
RPUSD3-203ENST00000423108 KDM5BQ9UGL1 1544 aa19.83■□□□□ 0.77
RPUSD3-203ENST00000423108 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
RPUSD3-203ENST00000423108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.82■□□□□ 0.76
RPUSD3-203ENST00000423108 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
RPUSD3-203ENST00000423108 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
RPUSD3-203ENST00000423108 APLP2Q06481 763 aa19.8■□□□□ 0.76
RPUSD3-203ENST00000423108 PPARGC1BQ86YN6 1023 aaKnown RBP19.8■□□□□ 0.76
RPUSD3-203ENST00000423108 NPM1P06748 294 aaKnown RBP eCLIP19.78■□□□□ 0.76
RPUSD3-203ENST00000423108 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
RPUSD3-203ENST00000423108 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
RPUSD3-203ENST00000423108 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
RPUSD3-203ENST00000423108 ZCCHC11Q5TAX3 1644 aaKnown RBP19.75■□□□□ 0.75
RPUSD3-203ENST00000423108 PLEKHD1A6NEE1 506 aa19.74■□□□□ 0.75
RPUSD3-203ENST00000423108 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
RPUSD3-203ENST00000423108 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
RPUSD3-203ENST00000423108 LRRC9Q6ZRR7 1453 aa19.71■□□□□ 0.75
RPUSD3-203ENST00000423108 ASXL2Q76L83 1435 aa19.69■□□□□ 0.74
RPUSD3-203ENST00000423108 CFAP43Q8NDM7 1665 aa19.69■□□□□ 0.74
RPUSD3-203ENST00000423108 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
RPUSD3-203ENST00000423108 MTUS2Q5JR59 1369 aa19.68■□□□□ 0.74
RPUSD3-203ENST00000423108 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
RPUSD3-203ENST00000423108 WDR7Q9Y4E6 1490 aa19.63■□□□□ 0.73
RPUSD3-203ENST00000423108 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
RPUSD3-203ENST00000423108 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
RPUSD3-203ENST00000423108 KIF14Q15058 1648 aa19.58■□□□□ 0.72
RPUSD3-203ENST00000423108 NCOA2Q15596 1464 aa19.57■□□□□ 0.72
RPUSD3-203ENST00000423108 ABCC10Q5T3U5 1492 aa19.56■□□□□ 0.72
RPUSD3-203ENST00000423108 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
RPUSD3-203ENST00000423108 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
RPUSD3-203ENST00000423108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.52■□□□□ 0.72
RPUSD3-203ENST00000423108 SUPT6HQ7KZ85 1726 aaKnown RBP19.51■□□□□ 0.71
RPUSD3-203ENST00000423108 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
RPUSD3-203ENST00000423108 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-203ENST00000423108 GPATCH8Q9UKJ3 1502 aaKnown RBP19.49■□□□□ 0.71
RPUSD3-203ENST00000423108 TTC37Q6PGP7 1564 aa19.48■□□□□ 0.71
RPUSD3-203ENST00000423108 DIP2BQ9P265 1576 aa19.46■□□□□ 0.71
RPUSD3-203ENST00000423108 GLI2P10070 1586 aa19.45■□□□□ 0.7
RPUSD3-203ENST00000423108 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
RPUSD3-203ENST00000423108 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
RPUSD3-203ENST00000423108 CD109Q6YHK3 1445 aa19.44■□□□□ 0.7
RPUSD3-203ENST00000423108 KIF13AQ9H1H9 1805 aa19.44■□□□□ 0.7
RPUSD3-203ENST00000423108 PLCH2O75038 1416 aa19.43■□□□□ 0.7
RPUSD3-203ENST00000423108 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
RPUSD3-203ENST00000423108 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
RPUSD3-203ENST00000423108 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
RPUSD3-203ENST00000423108 ZNF777Q9ULD5 760 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-203ENST00000423108 CDC42BPAQ5VT25 1732 aa19.38■□□□□ 0.69
RPUSD3-203ENST00000423108 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
RPUSD3-203ENST00000423108 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
RPUSD3-203ENST00000423108 MAP3K4Q9Y6R4 1608 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms