RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 NISCHQ9Y2I1 1504 aa29.76■■■□□ 2.36
RPUSD3-203ENST00000423108 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
RPUSD3-203ENST00000423108 ABCC9O60706 1549 aa25.25■■□□□ 1.63
RPUSD3-203ENST00000423108 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
RPUSD3-203ENST00000423108 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
RPUSD3-203ENST00000423108 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
RPUSD3-203ENST00000423108 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
RPUSD3-203ENST00000423108 NACADO15069 1562 aa24.49■■□□□ 1.51
RPUSD3-203ENST00000423108 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
RPUSD3-203ENST00000423108 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
RPUSD3-203ENST00000423108 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
RPUSD3-203ENST00000423108 UNC13AQ9UPW8 1703 aa23.82■■□□□ 1.4
RPUSD3-203ENST00000423108 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
RPUSD3-203ENST00000423108 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
RPUSD3-203ENST00000423108 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
RPUSD3-203ENST00000423108 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
RPUSD3-203ENST00000423108 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
RPUSD3-203ENST00000423108 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
RPUSD3-203ENST00000423108 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
RPUSD3-203ENST00000423108 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
RPUSD3-203ENST00000423108 RSF1Q96T23 1441 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-203ENST00000423108 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
RPUSD3-203ENST00000423108 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-203ENST00000423108 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
RPUSD3-203ENST00000423108 WIZO95785 1651 aa22.73■■□□□ 1.23
RPUSD3-203ENST00000423108 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
RPUSD3-203ENST00000423108 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
RPUSD3-203ENST00000423108 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
RPUSD3-203ENST00000423108 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
RPUSD3-203ENST00000423108 HMGXB3Q12766 1538 aa22.52■■□□□ 1.19
RPUSD3-203ENST00000423108 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
RPUSD3-203ENST00000423108 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
RPUSD3-203ENST00000423108 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
RPUSD3-203ENST00000423108 NESP48681 1621 aa22.02■■□□□ 1.12
RPUSD3-203ENST00000423108 CFTRP13569 1480 aa22■■□□□ 1.11
RPUSD3-203ENST00000423108 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
RPUSD3-203ENST00000423108 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
RPUSD3-203ENST00000423108 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.07
RPUSD3-203ENST00000423108 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
RPUSD3-203ENST00000423108 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
RPUSD3-203ENST00000423108 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
RPUSD3-203ENST00000423108 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
RPUSD3-203ENST00000423108 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
RPUSD3-203ENST00000423108 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
RPUSD3-203ENST00000423108 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
RPUSD3-203ENST00000423108 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
RPUSD3-203ENST00000423108 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
RPUSD3-203ENST00000423108 CUX1P39880 1505 aa21.52■■□□□ 1.04
RPUSD3-203ENST00000423108 TOPBP1Q92547 1522 aa21.48■■□□□ 1.03
RPUSD3-203ENST00000423108 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
RPUSD3-203ENST00000423108 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-203ENST00000423108 CUX2O14529 1486 aa21.45■■□□□ 1.03
RPUSD3-203ENST00000423108 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
RPUSD3-203ENST00000423108 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
RPUSD3-203ENST00000423108 WDR62O43379 1518 aa21.43■■□□□ 1.02
RPUSD3-203ENST00000423108 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
RPUSD3-203ENST00000423108 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
RPUSD3-203ENST00000423108 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
RPUSD3-203ENST00000423108 POLA1P09884 1462 aaPredicted RBP21.33■■□□□ 1.01
RPUSD3-203ENST00000423108 RAD54L2Q9Y4B4 1467 aa21.3■■□□□ 1
RPUSD3-203ENST00000423108 SOGA1O94964 1423 aa21.29■■□□□ 1
RPUSD3-203ENST00000423108 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
RPUSD3-203ENST00000423108 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
RPUSD3-203ENST00000423108 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
RPUSD3-203ENST00000423108 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
RPUSD3-203ENST00000423108 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
RPUSD3-203ENST00000423108 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
RPUSD3-203ENST00000423108 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.972e-7■■□□□ 14.5
RPUSD3-203ENST00000423108 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
RPUSD3-203ENST00000423108 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
RPUSD3-203ENST00000423108 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
RPUSD3-203ENST00000423108 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
RPUSD3-203ENST00000423108 IGF1RP08069 1367 aa21■□□□□ 0.95
RPUSD3-203ENST00000423108 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
RPUSD3-203ENST00000423108 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
RPUSD3-203ENST00000423108 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
RPUSD3-203ENST00000423108 EEA1Q15075 1411 aa20.94■□□□□ 0.94
RPUSD3-203ENST00000423108 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
RPUSD3-203ENST00000423108 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
RPUSD3-203ENST00000423108 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
RPUSD3-203ENST00000423108 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
RPUSD3-203ENST00000423108 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
RPUSD3-203ENST00000423108 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
RPUSD3-203ENST00000423108 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
RPUSD3-203ENST00000423108 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
RPUSD3-203ENST00000423108 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
RPUSD3-203ENST00000423108 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
RPUSD3-203ENST00000423108 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
RPUSD3-203ENST00000423108 FBLN2P98095 1184 aa20.74■□□□□ 0.91
RPUSD3-203ENST00000423108 CHMP7Q8WUX9 453 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-203ENST00000423108 RAPGEF2Q9Y4G8 1499 aa20.73■□□□□ 0.91
RPUSD3-203ENST00000423108 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
RPUSD3-203ENST00000423108 CUL7Q14999 1698 aa20.72■□□□□ 0.91
RPUSD3-203ENST00000423108 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
RPUSD3-203ENST00000423108 KIF21BO75037 1637 aa20.67■□□□□ 0.9
RPUSD3-203ENST00000423108 GRIN2AQ12879 1464 aa20.66■□□□□ 0.9
RPUSD3-203ENST00000423108 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
RPUSD3-203ENST00000423108 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-203ENST00000423108 CHD1O14646 1710 aa20.58■□□□□ 0.89
RPUSD3-203ENST00000423108 NUP160Q12769 1436 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 339.3 ms