RNA–Protein interactions for RNA: ENST00000421688.5

TMEM235-202, Transcript of transmembrane protein 235, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMEM235, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-202ENST00000421688 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
TMEM235-202ENST00000421688 CUX1P39880 1505 aa27.48■■□□□ 1.99
TMEM235-202ENST00000421688 CCER2I3L3R5 266 aa27.47■■□□□ 1.99
TMEM235-202ENST00000421688 TRIM52Q96A61 297 aa27.47■■□□□ 1.99
TMEM235-202ENST00000421688 TIAM1Q13009 1591 aa27.46■■□□□ 1.99
TMEM235-202ENST00000421688 MAP3K1Q13233 1512 aa27.42■■□□□ 1.98
TMEM235-202ENST00000421688 ANP32CO43423 234 aa27.41■■□□□ 1.98
TMEM235-202ENST00000421688 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
TMEM235-202ENST00000421688 TIMELESSQ9UNS1 1208 aa27.4■■□□□ 1.98
TMEM235-202ENST00000421688 HIRIP3Q9BW71 556 aaPredicted RBP27.38■■□□□ 1.97
TMEM235-202ENST00000421688 PHLDB1Q86UU1 1377 aa27.35■■□□□ 1.97
TMEM235-202ENST00000421688 LRRC9Q6ZRR7 1453 aa27.35■■□□□ 1.97
TMEM235-202ENST00000421688 FAM50AQ14320 339 aaKnown RBP27.32■■□□□ 1.96
TMEM235-202ENST00000421688 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
TMEM235-202ENST00000421688 MSH5O43196 834 aa27.31■■□□□ 1.96
TMEM235-202ENST00000421688 FANCIQ9NVI1 1328 aa27.19■■□□□ 1.94
TMEM235-202ENST00000421688 CFAP43Q8NDM7 1665 aa27.19■■□□□ 1.94
TMEM235-202ENST00000421688 IGF1RP08069 1367 aa27.17■■□□□ 1.94
TMEM235-202ENST00000421688 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.94
TMEM235-202ENST00000421688 CDK11AQ9UQ88 783 aaPredicted RBP27.13■■□□□ 1.93
TMEM235-202ENST00000421688 CFTRP13569 1480 aa27.12■■□□□ 1.93
TMEM235-202ENST00000421688 TONSLQ96HA7 1378 aa27.12■■□□□ 1.93
TMEM235-202ENST00000421688 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
TMEM235-202ENST00000421688 HNRNPUQ00839 825 aaKnown RBP eCLIP27.09■■□□□ 1.93
TMEM235-202ENST00000421688 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
TMEM235-202ENST00000421688 IRX6P78412 446 aaPredicted RBP27.07■■□□□ 1.92
TMEM235-202ENST00000421688 ERICH6Q7L0X2 663 aa27.07■■□□□ 1.92
TMEM235-202ENST00000421688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.05■■□□□ 1.92
TMEM235-202ENST00000421688 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
TMEM235-202ENST00000421688 CC2D2AQ9P2K1 1620 aa27.03■■□□□ 1.92
TMEM235-202ENST00000421688 P3H3Q8IVL6 736 aa27■■□□□ 1.91
TMEM235-202ENST00000421688 CCDC18Q5T9S5 1454 aa26.98■■□□□ 1.91
TMEM235-202ENST00000421688 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
TMEM235-202ENST00000421688 ERICH6BQ5W0A0 696 aa26.94■■□□□ 1.9
TMEM235-202ENST00000421688 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
TMEM235-202ENST00000421688 FYCO1Q9BQS8 1478 aa26.94■■□□□ 1.9
TMEM235-202ENST00000421688 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
TMEM235-202ENST00000421688 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
TMEM235-202ENST00000421688 PPP4R2Q9NY27 417 aa26.9■■□□□ 1.9
TMEM235-202ENST00000421688 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.89
TMEM235-202ENST00000421688 HFM1A2PYH4 1435 aa26.88■■□□□ 1.89
TMEM235-202ENST00000421688 CASKIN1Q8WXD9 1431 aa26.87■■□□□ 1.89
TMEM235-202ENST00000421688 CADPSQ9ULU8 1353 aa26.87■■□□□ 1.89
TMEM235-202ENST00000421688 KDM5BQ9UGL1 1544 aa26.87■■□□□ 1.89
TMEM235-202ENST00000421688 PTPN23Q9H3S7 1636 aa26.87■■□□□ 1.89
TMEM235-202ENST00000421688 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
TMEM235-202ENST00000421688 WASHC2AQ641Q2 1341 aa26.84■■□□□ 1.89
TMEM235-202ENST00000421688 PTPRKQ15262 1439 aa26.84■■□□□ 1.89
TMEM235-202ENST00000421688 AQRO60306 1485 aaKnown RBP eCLIP26.83■■□□□ 1.89
TMEM235-202ENST00000421688 EFCAB5A4FU69 1503 aa26.81■■□□□ 1.88
TMEM235-202ENST00000421688 HSPA5P11021 654 aaKnown RBP26.78■■□□□ 1.88
TMEM235-202ENST00000421688 NAIPQ13075 1403 aa26.78■■□□□ 1.88
TMEM235-202ENST00000421688 CCDC184Q52MB2 194 aa26.75■■□□□ 1.87
TMEM235-202ENST00000421688 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
TMEM235-202ENST00000421688 B4GALNT3Q6L9W6 998 aa26.73■■□□□ 1.87
TMEM235-202ENST00000421688 CNTLNQ9NXG0 1405 aa26.72■■□□□ 1.87
TMEM235-202ENST00000421688 MTUS2Q5JR59 1369 aa26.72■■□□□ 1.87
TMEM235-202ENST00000421688 DEKP35659 375 aaKnown RBP26.72■■□□□ 1.87
TMEM235-202ENST00000421688 FMN1Q68DA7 1419 aa26.69■■□□□ 1.86
TMEM235-202ENST00000421688 EIF4G2P78344 907 aaKnown RBP eCLIP26.68■■□□□ 1.86
TMEM235-202ENST00000421688 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
TMEM235-202ENST00000421688 FAM9BQ8IZU0 186 aa26.66■■□□□ 1.86
TMEM235-202ENST00000421688 ZBED9Q6R2W3 1325 aa26.65■■□□□ 1.86
TMEM235-202ENST00000421688 CTTNBP2Q8WZ74 1663 aa26.65■■□□□ 1.86
TMEM235-202ENST00000421688 PRKRIP1Q9H875 184 aaPredicted RBP26.64■■□□□ 1.85
TMEM235-202ENST00000421688 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.85
TMEM235-202ENST00000421688 NESP48681 1621 aa26.62■■□□□ 1.85
TMEM235-202ENST00000421688 NOP58Q9Y2X3 529 aaKnown RBP26.62■■□□□ 1.85
TMEM235-202ENST00000421688 MRS2Q9HD23 443 aa26.61■■□□□ 1.85
TMEM235-202ENST00000421688 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
TMEM235-202ENST00000421688 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
TMEM235-202ENST00000421688 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
TMEM235-202ENST00000421688 DENND4BO75064 1496 aaPredicted RBP26.57■■□□□ 1.84
TMEM235-202ENST00000421688 C11orf95C9JLR9 678 aaPredicted RBP26.57■■□□□ 1.84
TMEM235-202ENST00000421688 CCDC7Q96M83 1385 aa26.56■■□□□ 1.84
TMEM235-202ENST00000421688 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
TMEM235-202ENST00000421688 NCOA1Q15788 1441 aa26.56■■□□□ 1.84
TMEM235-202ENST00000421688 SUPT6HQ7KZ85 1726 aaKnown RBP26.55■■□□□ 1.84
TMEM235-202ENST00000421688 CUL7Q14999 1698 aa26.54■■□□□ 1.84
TMEM235-202ENST00000421688 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
TMEM235-202ENST00000421688 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
TMEM235-202ENST00000421688 PAK3O75914 559 aaPredicted RBP26.53■■□□□ 1.84
TMEM235-202ENST00000421688 NBR1Q14596 966 aa26.53■■□□□ 1.84
TMEM235-202ENST00000421688 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
TMEM235-202ENST00000421688 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
TMEM235-202ENST00000421688 L3MBTL2Q969R5 705 aa26.48■■□□□ 1.83
TMEM235-202ENST00000421688 EHBP1L1Q8N3D4 1523 aa26.48■■□□□ 1.83
TMEM235-202ENST00000421688 CHIC2Q9UKJ5 165 aa26.47■■□□□ 1.83
TMEM235-202ENST00000421688 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
TMEM235-202ENST00000421688 UGGT2Q9NYU1 1516 aa26.45■■□□□ 1.83
TMEM235-202ENST00000421688 SAMD9Q5K651 1589 aa26.44■■□□□ 1.82
TMEM235-202ENST00000421688 KDM6BO15054 1643 aa26.44■■□□□ 1.82
TMEM235-202ENST00000421688 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
TMEM235-202ENST00000421688 DNMBPQ6XZF7 1577 aa26.43■■□□□ 1.82
TMEM235-202ENST00000421688 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
TMEM235-202ENST00000421688 AKNAQ7Z591 1439 aa26.42■■□□□ 1.82
TMEM235-202ENST00000421688 SMG6Q86US8 1419 aaKnown RBP26.42■■□□□ 1.82
TMEM235-202ENST00000421688 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
TMEM235-202ENST00000421688 ARHGEF11O15085 1522 aa26.41■■□□□ 1.82
TMEM235-202ENST00000421688 TCOF1Q13428 1488 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms