RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 RAPGEF2Q9Y4G8 1499 aa30.02■■■□□ 2.4
MSL3-208ENST00000421368 KIAA0586Q9BVV6 1533 aa29.99■■■□□ 2.39
MSL3-208ENST00000421368 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
MSL3-208ENST00000421368 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
MSL3-208ENST00000421368 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
MSL3-208ENST00000421368 EEA1Q15075 1411 aa29.92■■■□□ 2.38
MSL3-208ENST00000421368 PRG4Q92954 1404 aaPredicted RBP29.9■■■□□ 2.38
MSL3-208ENST00000421368 IQGAP2Q13576 1575 aa29.87■■■□□ 2.37
MSL3-208ENST00000421368 CTTNBP2Q8WZ74 1663 aa29.86■■■□□ 2.37
MSL3-208ENST00000421368 CSRNP3Q8WYN3 585 aa29.86■■■□□ 2.37
MSL3-208ENST00000421368 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
MSL3-208ENST00000421368 UGGT2Q9NYU1 1516 aa29.7■■■□□ 2.34
MSL3-208ENST00000421368 KIF21BO75037 1637 aa29.69■■■□□ 2.34
MSL3-208ENST00000421368 DISP1Q96F81 1524 aa29.65■■■□□ 2.34
MSL3-208ENST00000421368 CARMIL2Q6F5E8 1435 aa29.64■■■□□ 2.34
MSL3-208ENST00000421368 KIAA0556O60303 1618 aa29.6■■■□□ 2.33
MSL3-208ENST00000421368 TNIKQ9UKE5 1360 aa29.55■■■□□ 2.32
MSL3-208ENST00000421368 PTPRGP23470 1445 aa29.53■■■□□ 2.32
MSL3-208ENST00000421368 ADCY10Q96PN6 1610 aa29.52■■■□□ 2.32
MSL3-208ENST00000421368 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
MSL3-208ENST00000421368 TTBK1Q5TCY1 1321 aaPredicted RBP29.46■■■□□ 2.31
MSL3-208ENST00000421368 SAMD9Q5K651 1589 aa29.43■■■□□ 2.3
MSL3-208ENST00000421368 EHMT2Q96KQ7 1210 aa29.41■■■□□ 2.3
MSL3-208ENST00000421368 UACAQ9BZF9 1416 aa29.35■■■□□ 2.29
MSL3-208ENST00000421368 UHRF1BP1LA0JNW5 1464 aa29.34■■■□□ 2.29
MSL3-208ENST00000421368 UBTFP17480 764 aaKnown RBP29.33■■■□□ 2.29
MSL3-208ENST00000421368 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
MSL3-208ENST00000421368 ABCC2Q92887 1545 aa29.33■■■□□ 2.29
MSL3-208ENST00000421368 P3H3Q8IVL6 736 aa29.3■■■□□ 2.28
MSL3-208ENST00000421368 RANGAP1P46060 587 aaPredicted RBP29.29■■■□□ 2.28
MSL3-208ENST00000421368 NPM1P06748 294 aaKnown RBP eCLIP29.28■■■□□ 2.28
MSL3-208ENST00000421368 MAPKBP1O60336 1514 aa29.28■■■□□ 2.28
MSL3-208ENST00000421368 PLB1Q6P1J6 1458 aa29.27■■■□□ 2.28
MSL3-208ENST00000421368 ABCA8O94911 1581 aa29.26■■■□□ 2.28
MSL3-208ENST00000421368 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
MSL3-208ENST00000421368 KIF13AQ9H1H9 1805 aa29.25■■■□□ 2.27
MSL3-208ENST00000421368 ZCCHC11Q5TAX3 1644 aaKnown RBP29.21■■■□□ 2.27
MSL3-208ENST00000421368 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.27
MSL3-208ENST00000421368 KDM5BQ9UGL1 1544 aa29.2■■■□□ 2.27
MSL3-208ENST00000421368 DIP2BQ9P265 1576 aa29.13■■■□□ 2.25
MSL3-208ENST00000421368 RAPGEF6Q8TEU7 1601 aa29.13■■■□□ 2.25
MSL3-208ENST00000421368 ABCC10Q5T3U5 1492 aa29.12■■■□□ 2.25
MSL3-208ENST00000421368 ARHGAP35Q9NRY4 1499 aa29.12■■■□□ 2.25
MSL3-208ENST00000421368 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
MSL3-208ENST00000421368 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
MSL3-208ENST00000421368 ATP10BO94823 1461 aa28.99■■■□□ 2.23
MSL3-208ENST00000421368 NUP153P49790 1475 aaKnown RBP28.99■■■□□ 2.23
MSL3-208ENST00000421368 TSPOAP1O95153 1857 aa28.97■■■□□ 2.23
MSL3-208ENST00000421368 ARID3CA6NKF2 412 aa28.96■■■□□ 2.23
MSL3-208ENST00000421368 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
MSL3-208ENST00000421368 GLI2P10070 1586 aa28.96■■■□□ 2.23
MSL3-208ENST00000421368 FMN1Q68DA7 1419 aa28.94■■■□□ 2.22
MSL3-208ENST00000421368 EPRSP07814 1512 aaKnown RBP28.94■■■□□ 2.22
MSL3-208ENST00000421368 CLIP1P30622 1438 aa28.93■■■□□ 2.22
MSL3-208ENST00000421368 LOC105371045A0A1W2PR82 267 aa28.87■■■□□ 2.21
MSL3-208ENST00000421368 HECW1Q76N89 1606 aa28.87■■■□□ 2.21
MSL3-208ENST00000421368 MAP3K4Q9Y6R4 1608 aa28.87■■■□□ 2.21
MSL3-208ENST00000421368 PPRC1Q5VV67 1664 aaKnown RBP28.86■■■□□ 2.21
MSL3-208ENST00000421368 LRRIQ1Q96JM4 1722 aa28.83■■■□□ 2.21
MSL3-208ENST00000421368 CEP162Q5TB80 1403 aa28.82■■■□□ 2.2
MSL3-208ENST00000421368 PCF11O94913 1555 aaKnown RBP28.81■■■□□ 2.2
MSL3-208ENST00000421368 CDK13Q14004 1512 aaKnown RBP28.81■■■□□ 2.2
MSL3-208ENST00000421368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
MSL3-208ENST00000421368 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
MSL3-208ENST00000421368 CFAP43Q8NDM7 1665 aa28.8■■■□□ 2.2
MSL3-208ENST00000421368 KCNH8Q96L42 1107 aa28.79■■■□□ 2.2
MSL3-208ENST00000421368 ATP1B4Q9UN42 357 aaPredicted RBP28.75■■■□□ 2.19
MSL3-208ENST00000421368 CASKIN1Q8WXD9 1431 aa28.74■■■□□ 2.19
MSL3-208ENST00000421368 ABCA9Q8IUA7 1624 aa28.72■■■□□ 2.19
MSL3-208ENST00000421368 FYCO1Q9BQS8 1478 aa28.69■■■□□ 2.18
MSL3-208ENST00000421368 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
MSL3-208ENST00000421368 CD109Q6YHK3 1445 aa28.67■■■□□ 2.18
MSL3-208ENST00000421368 KDM6BO15054 1643 aa28.65■■■□□ 2.18
MSL3-208ENST00000421368 TEX14Q8IWB6 1497 aa28.64■■■□□ 2.17
MSL3-208ENST00000421368 MAGI3Q5TCQ9 1506 aa28.64■■■□□ 2.17
MSL3-208ENST00000421368 CCDC18Q5T9S5 1454 aa28.62■■■□□ 2.17
MSL3-208ENST00000421368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.59■■■□□ 2.17
MSL3-208ENST00000421368 TTC37Q6PGP7 1564 aa28.58■■■□□ 2.17
MSL3-208ENST00000421368 CDK11AQ9UQ88 783 aaPredicted RBP28.55■■■□□ 2.16
MSL3-208ENST00000421368 KIF14Q15058 1648 aa28.54■■■□□ 2.16
MSL3-208ENST00000421368 TROQ12816 1431 aaPredicted RBP28.53■■■□□ 2.16
MSL3-208ENST00000421368 COL17A1Q9UMD9 1497 aaPredicted RBP28.5■■■□□ 2.15
MSL3-208ENST00000421368 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
MSL3-208ENST00000421368 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
MSL3-208ENST00000421368 NEO1Q92859 1461 aa28.42■■■□□ 2.14
MSL3-208ENST00000421368 CFAP74Q9C0B2 1584 aa28.4■■■□□ 2.14
MSL3-208ENST00000421368 ARAP3Q8WWN8 1544 aa28.39■■■□□ 2.14
MSL3-208ENST00000421368 PHLDB1Q86UU1 1377 aa28.37■■■□□ 2.13
MSL3-208ENST00000421368 PLCH2O75038 1416 aa28.36■■■□□ 2.13
MSL3-208ENST00000421368 FANCAO15360 1455 aa28.36■■■□□ 2.13
MSL3-208ENST00000421368 CDC42BPBQ9Y5S2 1711 aa28.35■■■□□ 2.13
MSL3-208ENST00000421368 TIAM1Q13009 1591 aa28.33■■■□□ 2.13
MSL3-208ENST00000421368 CDC42BPAQ5VT25 1732 aa28.33■■■□□ 2.13
MSL3-208ENST00000421368 PREX2Q70Z35 1606 aa28.32■■■□□ 2.12
MSL3-208ENST00000421368 AKNAQ7Z591 1439 aa28.31■■■□□ 2.12
MSL3-208ENST00000421368 EHBP1L1Q8N3D4 1523 aa28.31■■■□□ 2.12
MSL3-208ENST00000421368 MTUS2Q5JR59 1369 aa28.3■■■□□ 2.12
MSL3-208ENST00000421368 FRMPD1Q5SYB0 1578 aa28.28■■■□□ 2.12
MSL3-208ENST00000421368 RICTORQ6R327 1708 aa28.27■■■□□ 2.12
MSL3-208ENST00000421368 ARHGAP5Q13017 1502 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms