RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 CSRNP3Q8WYN3 585 aa34.45■■■■□ 3.11
HMGXB4-203ENST00000420166 SHROOM2Q13796 1616 aa34.38■■■■□ 3.09
HMGXB4-203ENST00000420166 FAM9AQ8IZU1 332 aaPredicted RBP34.38■■■■□ 3.09
HMGXB4-203ENST00000420166 KIAA0586Q9BVV6 1533 aa34.38■■■■□ 3.09
HMGXB4-203ENST00000420166 IQGAP2Q13576 1575 aa34.25■■■■□ 3.07
HMGXB4-203ENST00000420166 JPH4Q96JJ6 628 aa34.25■■■■□ 3.07
HMGXB4-203ENST00000420166 CTTNBP2Q8WZ74 1663 aa34.23■■■■□ 3.07
HMGXB4-203ENST00000420166 ERCC6L2Q5T890 1561 aa34.23■■■■□ 3.07
HMGXB4-203ENST00000420166 KIF21BO75037 1637 aa34.22■■■■□ 3.07
HMGXB4-203ENST00000420166 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
HMGXB4-203ENST00000420166 PRG4Q92954 1404 aaPredicted RBP34.2■■■■□ 3.06
HMGXB4-203ENST00000420166 CYB5RLQ6IPT4 315 aa34.08■■■■□ 3.05
HMGXB4-203ENST00000420166 UGGT2Q9NYU1 1516 aa34.06■■■■□ 3.04
HMGXB4-203ENST00000420166 GOLGA3Q08378 1498 aa34.01■■■■□ 3.03
HMGXB4-203ENST00000420166 CARMIL2Q6F5E8 1435 aa33.99■■■■□ 3.03
HMGXB4-203ENST00000420166 DISP1Q96F81 1524 aa33.97■■■■□ 3.03
HMGXB4-203ENST00000420166 KIAA0556O60303 1618 aa33.92■■■■□ 3.02
HMGXB4-203ENST00000420166 EHMT2Q96KQ7 1210 aa33.9■■■■□ 3.02
HMGXB4-203ENST00000420166 TNIKQ9UKE5 1360 aa33.86■■■■□ 3.01
HMGXB4-203ENST00000420166 UBTFP17480 764 aaKnown RBP33.85■■■■□ 3.01
HMGXB4-203ENST00000420166 PTPRGP23470 1445 aa33.81■■■■□ 3
HMGXB4-203ENST00000420166 SAMD9Q5K651 1589 aa33.78■■■■□ 3
HMGXB4-203ENST00000420166 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
HMGXB4-203ENST00000420166 RANGAP1P46060 587 aaPredicted RBP33.69■■■□□ 2.98
HMGXB4-203ENST00000420166 ADCY10Q96PN6 1610 aa33.68■■■□□ 2.98
HMGXB4-203ENST00000420166 EFCAB5A4FU69 1503 aa33.67■■■□□ 2.98
HMGXB4-203ENST00000420166 P3H3Q8IVL6 736 aa33.64■■■□□ 2.98
HMGXB4-203ENST00000420166 UACAQ9BZF9 1416 aa33.61■■■□□ 2.97
HMGXB4-203ENST00000420166 UHRF1BP1LA0JNW5 1464 aa33.58■■■□□ 2.97
HMGXB4-203ENST00000420166 ABCC2Q92887 1545 aa33.57■■■□□ 2.96
HMGXB4-203ENST00000420166 FHOD3Q2V2M9 1422 aa33.56■■■□□ 2.96
HMGXB4-203ENST00000420166 PLB1Q6P1J6 1458 aa33.54■■■□□ 2.96
HMGXB4-203ENST00000420166 ABCA8O94911 1581 aa33.53■■■□□ 2.96
HMGXB4-203ENST00000420166 ARHGAP35Q9NRY4 1499 aa33.52■■■□□ 2.96
HMGXB4-203ENST00000420166 NPM1P06748 294 aaKnown RBP eCLIP33.47■■■□□ 2.95
HMGXB4-203ENST00000420166 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
HMGXB4-203ENST00000420166 KDM5BQ9UGL1 1544 aa33.42■■■□□ 2.94
HMGXB4-203ENST00000420166 MAPKBP1O60336 1514 aa33.41■■■□□ 2.94
HMGXB4-203ENST00000420166 RAPGEF6Q8TEU7 1601 aa33.41■■■□□ 2.94
HMGXB4-203ENST00000420166 CLIP1P30622 1438 aa33.39■■■□□ 2.94
HMGXB4-203ENST00000420166 ZCCHC11Q5TAX3 1644 aaKnown RBP33.38■■■□□ 2.93
HMGXB4-203ENST00000420166 FMN1Q68DA7 1419 aa33.33■■■□□ 2.93
HMGXB4-203ENST00000420166 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
HMGXB4-203ENST00000420166 TRHP20396 242 aaPredicted RBP33.3■■■□□ 2.92
HMGXB4-203ENST00000420166 NUP153P49790 1475 aaKnown RBP33.27■■■□□ 2.92
HMGXB4-203ENST00000420166 ASXL2Q76L83 1435 aa33.26■■■□□ 2.91
HMGXB4-203ENST00000420166 ATP10BO94823 1461 aa33.23■■■□□ 2.91
HMGXB4-203ENST00000420166 KIF13AQ9H1H9 1805 aa33.22■■■□□ 2.91
HMGXB4-203ENST00000420166 ABCC10Q5T3U5 1492 aa33.2■■■□□ 2.91
HMGXB4-203ENST00000420166 ARID3CA6NKF2 412 aa33.2■■■□□ 2.91
HMGXB4-203ENST00000420166 DIP2BQ9P265 1576 aa33.19■■■□□ 2.9
HMGXB4-203ENST00000420166 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
HMGXB4-203ENST00000420166 WDR7Q9Y4E6 1490 aa33.14■■■□□ 2.9
HMGXB4-203ENST00000420166 PCF11O94913 1555 aaKnown RBP33.13■■■□□ 2.89
HMGXB4-203ENST00000420166 CASKIN1Q8WXD9 1431 aa33.1■■■□□ 2.89
HMGXB4-203ENST00000420166 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
HMGXB4-203ENST00000420166 EPRSP07814 1512 aaKnown RBP33.07■■■□□ 2.88
HMGXB4-203ENST00000420166 CDK13Q14004 1512 aaKnown RBP33.07■■■□□ 2.88
HMGXB4-203ENST00000420166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.06■■■□□ 2.88
HMGXB4-203ENST00000420166 HNRNPUL2Q1KMD3 747 aaKnown RBP33.06■■■□□ 2.88
HMGXB4-203ENST00000420166 ATP1B4Q9UN42 357 aaPredicted RBP33.06■■■□□ 2.88
HMGXB4-203ENST00000420166 FYCO1Q9BQS8 1478 aa33.05■■■□□ 2.88
HMGXB4-203ENST00000420166 GLI2P10070 1586 aa33.04■■■□□ 2.88
HMGXB4-203ENST00000420166 LRRIQ1Q96JM4 1722 aa33.04■■■□□ 2.88
HMGXB4-203ENST00000420166 CCDC18Q5T9S5 1454 aa32.95■■■□□ 2.87
HMGXB4-203ENST00000420166 KCNH8Q96L42 1107 aa32.94■■■□□ 2.86
HMGXB4-203ENST00000420166 PLEKHD1A6NEE1 506 aa32.93■■■□□ 2.86
HMGXB4-203ENST00000420166 TSPOAP1O95153 1857 aa32.93■■■□□ 2.86
HMGXB4-203ENST00000420166 MAP3K4Q9Y6R4 1608 aa32.92■■■□□ 2.86
HMGXB4-203ENST00000420166 VPS8Q8N3P4 1428 aa32.9■■■□□ 2.86
HMGXB4-203ENST00000420166 CFAP43Q8NDM7 1665 aa32.88■■■□□ 2.85
HMGXB4-203ENST00000420166 CDK11AQ9UQ88 783 aaPredicted RBP32.85■■■□□ 2.85
HMGXB4-203ENST00000420166 PPRC1Q5VV67 1664 aaKnown RBP32.85■■■□□ 2.85
HMGXB4-203ENST00000420166 ABCA9Q8IUA7 1624 aa32.84■■■□□ 2.85
HMGXB4-203ENST00000420166 TROQ12816 1431 aaPredicted RBP32.8■■■□□ 2.84
HMGXB4-203ENST00000420166 CD109Q6YHK3 1445 aa32.78■■■□□ 2.84
HMGXB4-203ENST00000420166 MAGI3Q5TCQ9 1506 aa32.76■■■□□ 2.83
HMGXB4-203ENST00000420166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.74■■■□□ 2.83
HMGXB4-203ENST00000420166 TEX14Q8IWB6 1497 aa32.73■■■□□ 2.83
HMGXB4-203ENST00000420166 KIF14Q15058 1648 aa32.73■■■□□ 2.83
HMGXB4-203ENST00000420166 TTC37Q6PGP7 1564 aa32.72■■■□□ 2.83
HMGXB4-203ENST00000420166 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
HMGXB4-203ENST00000420166 MTUS2Q5JR59 1369 aa32.61■■■□□ 2.81
HMGXB4-203ENST00000420166 MAP3K1Q13233 1512 aa32.6■■■□□ 2.81
HMGXB4-203ENST00000420166 EHBP1L1Q8N3D4 1523 aa32.6■■■□□ 2.81
HMGXB4-203ENST00000420166 KDM6BO15054 1643 aa32.59■■■□□ 2.81
HMGXB4-203ENST00000420166 MYO5CQ9NQX4 1742 aa32.58■■■□□ 2.81
HMGXB4-203ENST00000420166 PLCH2O75038 1416 aa32.53■■■□□ 2.8
HMGXB4-203ENST00000420166 NEO1Q92859 1461 aa32.53■■■□□ 2.8
HMGXB4-203ENST00000420166 ARAP3Q8WWN8 1544 aa32.51■■■□□ 2.8
HMGXB4-203ENST00000420166 CFAP74Q9C0B2 1584 aa32.5■■■□□ 2.79
HMGXB4-203ENST00000420166 FANCAO15360 1455 aa32.49■■■□□ 2.79
HMGXB4-203ENST00000420166 LRRC9Q6ZRR7 1453 aa32.48■■■□□ 2.79
HMGXB4-203ENST00000420166 PHLDB1Q86UU1 1377 aa32.48■■■□□ 2.79
HMGXB4-203ENST00000420166 COL17A1Q9UMD9 1497 aaPredicted RBP32.48■■■□□ 2.79
HMGXB4-203ENST00000420166 CDC42BPAQ5VT25 1732 aa32.47■■■□□ 2.79
HMGXB4-203ENST00000420166 PREX2Q70Z35 1606 aa32.47■■■□□ 2.79
HMGXB4-203ENST00000420166 APLP2Q06481 763 aa32.46■■■□□ 2.79
HMGXB4-203ENST00000420166 CDC42BPBQ9Y5S2 1711 aa32.46■■■□□ 2.79
HMGXB4-203ENST00000420166 SUPT6HQ7KZ85 1726 aaKnown RBP32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms