RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.322e-6■■■■■ 35.6
SEC24D-202ENST00000419654 CTTNBP2Q8WZ74 1663 aa23.29■■□□□ 1.32
SEC24D-202ENST00000419654 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
SEC24D-202ENST00000419654 GRIN2BQ13224 1484 aa23.27■■□□□ 1.31
SEC24D-202ENST00000419654 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
SEC24D-202ENST00000419654 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
SEC24D-202ENST00000419654 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
SEC24D-202ENST00000419654 EFCAB5A4FU69 1503 aa23.17■■□□□ 1.3
SEC24D-202ENST00000419654 APLP2Q06481 763 aa23.16■■□□□ 1.3
SEC24D-202ENST00000419654 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
SEC24D-202ENST00000419654 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
SEC24D-202ENST00000419654 SAMD9Q5K651 1589 aa23.08■■□□□ 1.28
SEC24D-202ENST00000419654 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
SEC24D-202ENST00000419654 FHOD3Q2V2M9 1422 aa23.05■■□□□ 1.28
SEC24D-202ENST00000419654 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
SEC24D-202ENST00000419654 MAP3K1Q13233 1512 aa23.02■■□□□ 1.28
SEC24D-202ENST00000419654 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
SEC24D-202ENST00000419654 IQGAP2Q13576 1575 aa23.01■■□□□ 1.27
SEC24D-202ENST00000419654 PCF11O94913 1555 aaKnown RBP23■■□□□ 1.27
SEC24D-202ENST00000419654 GRIN2AQ12879 1464 aa23■■□□□ 1.27
SEC24D-202ENST00000419654 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
SEC24D-202ENST00000419654 DIEXFQ68CQ4 756 aaKnown RBP22.97■■□□□ 1.27
SEC24D-202ENST00000419654 TIAM1Q13009 1591 aa22.97■■□□□ 1.27
SEC24D-202ENST00000419654 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
SEC24D-202ENST00000419654 FYCO1Q9BQS8 1478 aa22.96■■□□□ 1.27
SEC24D-202ENST00000419654 FMN1Q68DA7 1419 aa22.96■■□□□ 1.27
SEC24D-202ENST00000419654 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.26
SEC24D-202ENST00000419654 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
SEC24D-202ENST00000419654 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
SEC24D-202ENST00000419654 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
SEC24D-202ENST00000419654 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
SEC24D-202ENST00000419654 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
SEC24D-202ENST00000419654 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
SEC24D-202ENST00000419654 NUP160Q12769 1436 aa22.82■■□□□ 1.24
SEC24D-202ENST00000419654 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
SEC24D-202ENST00000419654 RRBP1Q9P2E9 1410 aaKnown RBP22.8■■□□□ 1.24
SEC24D-202ENST00000419654 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
SEC24D-202ENST00000419654 LRRIQ1Q96JM4 1722 aa22.78■■□□□ 1.24
SEC24D-202ENST00000419654 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
SEC24D-202ENST00000419654 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
SEC24D-202ENST00000419654 FBLN2P98095 1184 aa22.77■■□□□ 1.24
SEC24D-202ENST00000419654 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
SEC24D-202ENST00000419654 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
SEC24D-202ENST00000419654 HECW1Q76N89 1606 aa22.7■■□□□ 1.22
SEC24D-202ENST00000419654 CCNB3Q8WWL7 1395 aa22.69■■□□□ 1.22
SEC24D-202ENST00000419654 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
SEC24D-202ENST00000419654 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
SEC24D-202ENST00000419654 PHLDB1Q86UU1 1377 aa22.67■■□□□ 1.22
SEC24D-202ENST00000419654 CHD1O14646 1710 aa22.66■■□□□ 1.22
SEC24D-202ENST00000419654 JPH4Q96JJ6 628 aa22.64■■□□□ 1.22
SEC24D-202ENST00000419654 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
SEC24D-202ENST00000419654 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
SEC24D-202ENST00000419654 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
SEC24D-202ENST00000419654 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
SEC24D-202ENST00000419654 ITGAEP38570 1179 aa22.59■■□□□ 1.21
SEC24D-202ENST00000419654 GTF3C3Q9Y5Q9 886 aa22.59■■□□□ 1.21
SEC24D-202ENST00000419654 RAPGEF6Q8TEU7 1601 aa22.58■■□□□ 1.21
SEC24D-202ENST00000419654 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.2
SEC24D-202ENST00000419654 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
SEC24D-202ENST00000419654 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
SEC24D-202ENST00000419654 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
SEC24D-202ENST00000419654 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
SEC24D-202ENST00000419654 MIER1Q8N108 512 aa22.54■■□□□ 1.2
SEC24D-202ENST00000419654 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
SEC24D-202ENST00000419654 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
SEC24D-202ENST00000419654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.51■■□□□ 1.19
SEC24D-202ENST00000419654 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
SEC24D-202ENST00000419654 FGD6Q6ZV73 1430 aa22.49■■□□□ 1.19
SEC24D-202ENST00000419654 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
SEC24D-202ENST00000419654 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
SEC24D-202ENST00000419654 MYOM3Q5VTT5 1437 aa22.46■■□□□ 1.19
SEC24D-202ENST00000419654 ABCA8O94911 1581 aa22.44■■□□□ 1.18
SEC24D-202ENST00000419654 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
SEC24D-202ENST00000419654 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
SEC24D-202ENST00000419654 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
SEC24D-202ENST00000419654 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
SEC24D-202ENST00000419654 PTPRGP23470 1445 aa22.36■■□□□ 1.17
SEC24D-202ENST00000419654 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
SEC24D-202ENST00000419654 PTPN23Q9H3S7 1636 aa22.35■■□□□ 1.17
SEC24D-202ENST00000419654 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.17
SEC24D-202ENST00000419654 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.16
SEC24D-202ENST00000419654 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
SEC24D-202ENST00000419654 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
SEC24D-202ENST00000419654 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
SEC24D-202ENST00000419654 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
SEC24D-202ENST00000419654 ATP10BO94823 1461 aa22.3■■□□□ 1.16
SEC24D-202ENST00000419654 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
SEC24D-202ENST00000419654 PTPRKQ15262 1439 aa22.26■■□□□ 1.15
SEC24D-202ENST00000419654 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
SEC24D-202ENST00000419654 UACAQ9BZF9 1416 aa22.24■■□□□ 1.15
SEC24D-202ENST00000419654 KIF14Q15058 1648 aa22.22■■□□□ 1.15
SEC24D-202ENST00000419654 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
SEC24D-202ENST00000419654 ABCC2Q92887 1545 aa22.18■■□□□ 1.14
SEC24D-202ENST00000419654 ITSN2Q9NZM3 1697 aa22.18■■□□□ 1.14
SEC24D-202ENST00000419654 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
SEC24D-202ENST00000419654 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
SEC24D-202ENST00000419654 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
SEC24D-202ENST00000419654 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
SEC24D-202ENST00000419654 NAIPQ13075 1403 aa22.13■■□□□ 1.13
SEC24D-202ENST00000419654 UHRF1BP1LA0JNW5 1464 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms