RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 FHAD1B1AJZ9 1412 aa31.31■■■□□ 2.6
FAM3A-208ENST00000419205 TIAM1Q13009 1591 aa31.31■■■□□ 2.6
FAM3A-208ENST00000419205 RRBP1Q9P2E9 1410 aaKnown RBP31.27■■■□□ 2.6
FAM3A-208ENST00000419205 HNRNPUL2Q1KMD3 747 aaKnown RBP31.26■■■□□ 2.59
FAM3A-208ENST00000419205 CFAP43Q8NDM7 1665 aa31.22■■■□□ 2.59
FAM3A-208ENST00000419205 PBRM1Q86U86 1689 aa31.22■■■□□ 2.59
FAM3A-208ENST00000419205 PCF11O94913 1555 aaKnown RBP31.21■■■□□ 2.59
FAM3A-208ENST00000419205 AQRO60306 1485 aaKnown RBP eCLIP31.18■■■□□ 2.584e-7■■■□□ 18.5
FAM3A-208ENST00000419205 WDR62O43379 1518 aa31.16■■■□□ 2.58
FAM3A-208ENST00000419205 FYCO1Q9BQS8 1478 aa31.15■■■□□ 2.58
FAM3A-208ENST00000419205 FHOD3Q2V2M9 1422 aa31.14■■■□□ 2.58
FAM3A-208ENST00000419205 SAMD9Q5K651 1589 aa31.14■■■□□ 2.58
FAM3A-208ENST00000419205 LRRC9Q6ZRR7 1453 aa31.13■■■□□ 2.57
FAM3A-208ENST00000419205 CASKIN1Q8WXD9 1431 aa31.1■■■□□ 2.57
FAM3A-208ENST00000419205 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
FAM3A-208ENST00000419205 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
FAM3A-208ENST00000419205 ADAMTS12P58397 1594 aa31.06■■■□□ 2.56
FAM3A-208ENST00000419205 FMN1Q68DA7 1419 aa31.06■■■□□ 2.56
FAM3A-208ENST00000419205 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
FAM3A-208ENST00000419205 GRIN2BQ13224 1484 aa31.01■■■□□ 2.56
FAM3A-208ENST00000419205 SNAPC4Q5SXM2 1469 aa30.99■■■□□ 2.55
FAM3A-208ENST00000419205 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
FAM3A-208ENST00000419205 IQGAP2Q13576 1575 aa30.89■■■□□ 2.54
FAM3A-208ENST00000419205 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.53
FAM3A-208ENST00000419205 PHLDB1Q86UU1 1377 aa30.88■■■□□ 2.53
FAM3A-208ENST00000419205 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
FAM3A-208ENST00000419205 CLSPNQ9HAW4 1339 aa30.88■■■□□ 2.53
FAM3A-208ENST00000419205 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
FAM3A-208ENST00000419205 DHX57Q6P158 1386 aaKnown RBP30.83■■■□□ 2.53
FAM3A-208ENST00000419205 EIF4G3O43432 1585 aaKnown RBP30.82■■■□□ 2.53
FAM3A-208ENST00000419205 ATP1B4Q9UN42 357 aaPredicted RBP30.82■■■□□ 2.52
FAM3A-208ENST00000419205 UGGT2Q9NYU1 1516 aa30.75■■■□□ 2.51
FAM3A-208ENST00000419205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.75■■■□□ 2.51
FAM3A-208ENST00000419205 CCDC18Q5T9S5 1454 aa30.69■■■□□ 2.5
FAM3A-208ENST00000419205 HECW1Q76N89 1606 aa30.68■■■□□ 2.5
FAM3A-208ENST00000419205 KIAA0586Q9BVV6 1533 aa30.68■■■□□ 2.5
FAM3A-208ENST00000419205 EHBP1L1Q8N3D4 1523 aa30.67■■■□□ 2.5
FAM3A-208ENST00000419205 GRIN2AQ12879 1464 aa30.67■■■□□ 2.5
FAM3A-208ENST00000419205 MAGI1Q96QZ7 1491 aaPredicted RBP30.67■■■□□ 2.5
FAM3A-208ENST00000419205 MTUS2Q5JR59 1369 aa30.67■■■□□ 2.5
FAM3A-208ENST00000419205 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
FAM3A-208ENST00000419205 ITGAEP38570 1179 aa30.64■■■□□ 2.49
FAM3A-208ENST00000419205 RAB3GAP2Q9H2M9 1393 aa30.62■■■□□ 2.49
FAM3A-208ENST00000419205 FGD6Q6ZV73 1430 aa30.62■■■□□ 2.49
FAM3A-208ENST00000419205 SETD5Q9C0A6 1442 aa30.61■■■□□ 2.49
FAM3A-208ENST00000419205 ZNF316A6NFI3 1004 aaPredicted RBP30.6■■■□□ 2.49
FAM3A-208ENST00000419205 FAM50AQ14320 339 aaKnown RBP30.59■■■□□ 2.49
FAM3A-208ENST00000419205 KIAA0556O60303 1618 aa30.58■■■□□ 2.49
FAM3A-208ENST00000419205 NCOA2Q15596 1464 aa30.57■■■□□ 2.48
FAM3A-208ENST00000419205 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
FAM3A-208ENST00000419205 SYNJ2O15056 1496 aa30.55■■■□□ 2.48
FAM3A-208ENST00000419205 DIEXFQ68CQ4 756 aaKnown RBP30.54■■■□□ 2.48
FAM3A-208ENST00000419205 DISP1Q96F81 1524 aa30.53■■■□□ 2.48
FAM3A-208ENST00000419205 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
FAM3A-208ENST00000419205 MAGI3Q5TCQ9 1506 aa30.53■■■□□ 2.48
FAM3A-208ENST00000419205 MYOM3Q5VTT5 1437 aa30.52■■■□□ 2.48
FAM3A-208ENST00000419205 CEP170Q5SW79 1584 aa30.47■■■□□ 2.47
FAM3A-208ENST00000419205 MAPKBP1O60336 1514 aa30.45■■■□□ 2.47
FAM3A-208ENST00000419205 PTPN23Q9H3S7 1636 aa30.41■■■□□ 2.46
FAM3A-208ENST00000419205 CDK13Q14004 1512 aaKnown RBP30.4■■■□□ 2.46
FAM3A-208ENST00000419205 NUP160Q12769 1436 aa30.39■■■□□ 2.46
FAM3A-208ENST00000419205 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
FAM3A-208ENST00000419205 RAPGEF6Q8TEU7 1601 aa30.38■■■□□ 2.45
FAM3A-208ENST00000419205 TCOF1Q13428 1488 aaKnown RBP30.36■■■□□ 2.45
FAM3A-208ENST00000419205 HFM1A2PYH4 1435 aa30.32■■■□□ 2.44
FAM3A-208ENST00000419205 NUP153P49790 1475 aaKnown RBP30.31■■■□□ 2.44
FAM3A-208ENST00000419205 PTPRKQ15262 1439 aa30.31■■■□□ 2.44
FAM3A-208ENST00000419205 MIA2Q96PC5 1412 aa30.28■■■□□ 2.44
FAM3A-208ENST00000419205 CARMIL2Q6F5E8 1435 aa30.23■■■□□ 2.43
FAM3A-208ENST00000419205 NAIPQ13075 1403 aa30.2■■■□□ 2.43
FAM3A-208ENST00000419205 FBLN2P98095 1184 aa30.2■■■□□ 2.42
FAM3A-208ENST00000419205 GCC2Q8IWJ2 1684 aa30.17■■■□□ 2.42
FAM3A-208ENST00000419205 AKNAQ7Z591 1439 aa30.17■■■□□ 2.42
FAM3A-208ENST00000419205 JPH4Q96JJ6 628 aa30.16■■■□□ 2.42
FAM3A-208ENST00000419205 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
FAM3A-208ENST00000419205 CDK11AQ9UQ88 783 aaPredicted RBP30.13■■■□□ 2.41
FAM3A-208ENST00000419205 PLB1Q6P1J6 1458 aa30.11■■■□□ 2.41
FAM3A-208ENST00000419205 TIMELESSQ9UNS1 1208 aa30.11■■■□□ 2.41
FAM3A-208ENST00000419205 ARID3CA6NKF2 412 aa30.1■■■□□ 2.41
FAM3A-208ENST00000419205 ADCY10Q96PN6 1610 aa30.1■■■□□ 2.41
FAM3A-208ENST00000419205 TROQ12816 1431 aaPredicted RBP30.08■■■□□ 2.41
FAM3A-208ENST00000419205 ABCA8O94911 1581 aa30.07■■■□□ 2.4
FAM3A-208ENST00000419205 ITSN2Q9NZM3 1697 aa30.03■■■□□ 2.4
FAM3A-208ENST00000419205 DNMT1P26358 1616 aaKnown RBP30.03■■■□□ 2.4
FAM3A-208ENST00000419205 CHD1O14646 1710 aa30.02■■■□□ 2.4
FAM3A-208ENST00000419205 SIN3AQ96ST3 1273 aa30.01■■■□□ 2.39
FAM3A-208ENST00000419205 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
FAM3A-208ENST00000419205 DAPK1P53355 1430 aa29.97■■■□□ 2.39
FAM3A-208ENST00000419205 ROCK1Q13464 1354 aa29.95■■■□□ 2.39
FAM3A-208ENST00000419205 KIF14Q15058 1648 aa29.94■■■□□ 2.38
FAM3A-208ENST00000419205 NEUROD1Q13562 356 aa29.94■■■□□ 2.38
FAM3A-208ENST00000419205 MIER1Q8N108 512 aa29.93■■■□□ 2.38
FAM3A-208ENST00000419205 RRP7BPQ9NSQ0 103 aa29.92■■■□□ 2.38
FAM3A-208ENST00000419205 ABCC5O15440 1437 aa29.91■■■□□ 2.38
FAM3A-208ENST00000419205 KDM6BO15054 1643 aa29.91■■■□□ 2.38
FAM3A-208ENST00000419205 SHROOM2Q13796 1616 aa29.91■■■□□ 2.38
FAM3A-208ENST00000419205 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
FAM3A-208ENST00000419205 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
FAM3A-208ENST00000419205 ACIN1Q9UKV3 1341 aaKnown RBP29.89■■■□□ 2.38
FAM3A-208ENST00000419205 ATP10BO94823 1461 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms