RNA–Protein interactions for RNA: ENST00000418880.1

ACAA1-204, Transcript of acetyl-CoA acyltransferase 1, human

TSL 3

Gene ACAA1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAA1-204	ENST00000418880	JPH4	Q96JJ6	628 aa		33.71	■■■□□ 2.99
ACAA1-204	ENST00000418880	KIAA0586	Q9BVV6	1533 aa		33.69	■■■□□ 2.98
ACAA1-204	ENST00000418880	PRG4	Q92954	1404 aa	Predicted RBP	33.65	■■■□□ 2.98
ACAA1-204	ENST00000418880	RAPGEF2	Q9Y4G8	1499 aa		33.61	■■■□□ 2.97
ACAA1-204	ENST00000418880	IQGAP2	Q13576	1575 aa		33.47	■■■□□ 2.95
ACAA1-204	ENST00000418880	PRX	Q9BXM0	1461 aa		33.42	■■■□□ 2.94
ACAA1-204	ENST00000418880	EEA1	Q15075	1411 aa		33.37	■■■□□ 2.93
ACAA1-204	ENST00000418880	CARMIL2	Q6F5E8	1435 aa		33.36	■■■□□ 2.93
ACAA1-204	ENST00000418880	TRH	P20396	242 aa	Predicted RBP	33.35	■■■□□ 2.93
ACAA1-204	ENST00000418880	CSRNP3	Q8WYN3	585 aa		33.35	■■■□□ 2.93
ACAA1-204	ENST00000418880	CHIC1	Q5VXU3	224 aa		33.33	■■■□□ 2.93
ACAA1-204	ENST00000418880	CTTNBP2	Q8WZ74	1663 aa		33.32	■■■□□ 2.92
ACAA1-204	ENST00000418880	UGGT2	Q9NYU1	1516 aa		33.28	■■■□□ 2.92
ACAA1-204	ENST00000418880	TNIK	Q9UKE5	1360 aa		33.24	■■■□□ 2.91
ACAA1-204	ENST00000418880	PTPRG	P23470	1445 aa		33.23	■■■□□ 2.91
ACAA1-204	ENST00000418880	DISP1	Q96F81	1524 aa		33.23	■■■□□ 2.91
ACAA1-204	ENST00000418880	ADCY10	Q96PN6	1610 aa		33.17	■■■□□ 2.9
ACAA1-204	ENST00000418880	NPM1	P06748	294 aa	Known RBP eCLIP	33.15	■■■□□ 2.9
ACAA1-204	ENST00000418880	KIAA0556	O60303	1618 aa		33.14	■■■□□ 2.9
ACAA1-204	ENST00000418880	FAM9A	Q8IZU1	332 aa	Predicted RBP	33.14	■■■□□ 2.9
ACAA1-204	ENST00000418880	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.12	■■■□□ 2.89
ACAA1-204	ENST00000418880	GOLGA3	Q08378	1498 aa		33.1	■■■□□ 2.89
ACAA1-204	ENST00000418880	KIF21B	O75037	1637 aa		33.03	■■■□□ 2.88
ACAA1-204	ENST00000418880	MAPKBP1	O60336	1514 aa		33.02	■■■□□ 2.88
ACAA1-204	ENST00000418880	UACA	Q9BZF9	1416 aa		33.01	■■■□□ 2.87
ACAA1-204	ENST00000418880	UHRF1BP1L	A0JNW5	1464 aa		33	■■■□□ 2.87
ACAA1-204	ENST00000418880	ABCC2	Q92887	1545 aa		32.97	■■■□□ 2.87
ACAA1-204	ENST00000418880	KIF13A	Q9H1H9	1805 aa		32.93	■■■□□ 2.86
ACAA1-204	ENST00000418880	ABCC10	Q5T3U5	1492 aa		32.89	■■■□□ 2.86
ACAA1-204	ENST00000418880	SAMD9	Q5K651	1589 aa		32.85	■■■□□ 2.85
ACAA1-204	ENST00000418880	KDM5B	Q9UGL1	1544 aa		32.83	■■■□□ 2.85
ACAA1-204	ENST00000418880	DIP2B	Q9P265	1576 aa		32.83	■■■□□ 2.85
ACAA1-204	ENST00000418880	FAM69C	Q0P6D2	419 aa		32.82	■■■□□ 2.84
ACAA1-204	ENST00000418880	PLB1	Q6P1J6	1458 aa		32.81	■■■□□ 2.84
ACAA1-204	ENST00000418880	P3H3	Q8IVL6	736 aa		32.8	■■■□□ 2.84
ACAA1-204	ENST00000418880	ABCA8	O94911	1581 aa		32.79	■■■□□ 2.84
ACAA1-204	ENST00000418880	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.77	■■■□□ 2.84
ACAA1-204	ENST00000418880	ASXL2	Q76L83	1435 aa		32.77	■■■□□ 2.84
ACAA1-204	ENST00000418880	UBTF	P17480	764 aa	Known RBP	32.75	■■■□□ 2.83
ACAA1-204	ENST00000418880	RANGAP1	P46060	587 aa	Predicted RBP	32.73	■■■□□ 2.83
ACAA1-204	ENST00000418880	EHMT2	Q96KQ7	1210 aa		32.71	■■■□□ 2.83
ACAA1-204	ENST00000418880	EFCAB5	A4FU69	1503 aa		32.69	■■■□□ 2.82
ACAA1-204	ENST00000418880	GLI2	P10070	1586 aa		32.63	■■■□□ 2.81
ACAA1-204	ENST00000418880	FHOD3	Q2V2M9	1422 aa		32.62	■■■□□ 2.81
ACAA1-204	ENST00000418880	RAPGEF6	Q8TEU7	1601 aa		32.59	■■■□□ 2.81
ACAA1-204	ENST00000418880	TSPOAP1	O95153	1857 aa		32.59	■■■□□ 2.81
ACAA1-204	ENST00000418880	EPRS	P07814	1512 aa	Known RBP	32.58	■■■□□ 2.81
ACAA1-204	ENST00000418880	WDR7	Q9Y4E6	1490 aa		32.58	■■■□□ 2.81
ACAA1-204	ENST00000418880	ATP10B	O94823	1461 aa		32.52	■■■□□ 2.8
ACAA1-204	ENST00000418880	ARID3C	A6NKF2	412 aa		32.47	■■■□□ 2.79
ACAA1-204	ENST00000418880	MAP3K4	Q9Y6R4	1608 aa		32.46	■■■□□ 2.79
ACAA1-204	ENST00000418880	NUP153	P49790	1475 aa	Known RBP	32.45	■■■□□ 2.79
ACAA1-204	ENST00000418880	ARHGAP35	Q9NRY4	1499 aa		32.45	■■■□□ 2.79
ACAA1-204	ENST00000418880	PPRC1	Q5VV67	1664 aa	Known RBP	32.43	■■■□□ 2.78
ACAA1-204	ENST00000418880	KCNH8	Q96L42	1107 aa		32.41	■■■□□ 2.78
ACAA1-204	ENST00000418880	FMN1	Q68DA7	1419 aa		32.39	■■■□□ 2.78
ACAA1-204	ENST00000418880	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.38	■■■□□ 2.77
ACAA1-204	ENST00000418880	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.38	■■■□□ 2.77
ACAA1-204	ENST00000418880	KDM6B	O15054	1643 aa		32.37	■■■□□ 2.77
ACAA1-204	ENST00000418880	CFAP43	Q8NDM7	1665 aa		32.36	■■■□□ 2.77
ACAA1-204	ENST00000418880	TEX14	Q8IWB6	1497 aa		32.35	■■■□□ 2.77
ACAA1-204	ENST00000418880	CD109	Q6YHK3	1445 aa		32.31	■■■□□ 2.76
ACAA1-204	ENST00000418880	HECW1	Q76N89	1606 aa		32.26	■■■□□ 2.75
ACAA1-204	ENST00000418880	MAGI3	Q5TCQ9	1506 aa		32.26	■■■□□ 2.75
ACAA1-204	ENST00000418880	PLEKHD1	A6NEE1	506 aa		32.25	■■■□□ 2.75
ACAA1-204	ENST00000418880	ABCA9	Q8IUA7	1624 aa		32.22	■■■□□ 2.75
ACAA1-204	ENST00000418880	CLIP1	P30622	1438 aa		32.2	■■■□□ 2.75
ACAA1-204	ENST00000418880	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.2	■■■□□ 2.75
ACAA1-204	ENST00000418880	CDK13	Q14004	1512 aa	Known RBP	32.19	■■■□□ 2.74
ACAA1-204	ENST00000418880	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.11	■■■□□ 2.73
ACAA1-204	ENST00000418880	CASKIN1	Q8WXD9	1431 aa		32.09	■■■□□ 2.73
ACAA1-204	ENST00000418880	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.09	■■■□□ 2.73
ACAA1-204	ENST00000418880	PCF11	O94913	1555 aa	Known RBP	32.07	■■■□□ 2.72
ACAA1-204	ENST00000418880	LRRIQ1	Q96JM4	1722 aa		32.05	■■■□□ 2.72
ACAA1-204	ENST00000418880	PHLDB1	Q86UU1	1377 aa		32.04	■■■□□ 2.72
ACAA1-204	ENST00000418880	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.03	■■■□□ 2.72
ACAA1-204	ENST00000418880	CCDC18	Q5T9S5	1454 aa		32.02	■■■□□ 2.72
ACAA1-204	ENST00000418880	FYCO1	Q9BQS8	1478 aa		32.02	■■■□□ 2.72
ACAA1-204	ENST00000418880	CEP162	Q5TB80	1403 aa		32	■■■□□ 2.71
ACAA1-204	ENST00000418880	NEO1	Q92859	1461 aa		31.99	■■■□□ 2.71
ACAA1-204	ENST00000418880	ARAP3	Q8WWN8	1544 aa		31.99	■■■□□ 2.71
ACAA1-204	ENST00000418880	TTC37	Q6PGP7	1564 aa		31.98	■■■□□ 2.71
ACAA1-204	ENST00000418880	TRO	Q12816	1431 aa	Predicted RBP	31.95	■■■□□ 2.71
ACAA1-204	ENST00000418880	LOC105371045	A0A1W2PR82	267 aa		31.94	■■■□□ 2.7
ACAA1-204	ENST00000418880	KIF14	Q15058	1648 aa		31.92	■■■□□ 2.7
ACAA1-204	ENST00000418880	CFAP74	Q9C0B2	1584 aa		31.9	■■■□□ 2.7
ACAA1-204	ENST00000418880	FANCA	O15360	1455 aa		31.88	■■■□□ 2.69
ACAA1-204	ENST00000418880	PLCH2	O75038	1416 aa		31.85	■■■□□ 2.69
ACAA1-204	ENST00000418880	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.85	■■■□□ 2.69
ACAA1-204	ENST00000418880	MYO5C	Q9NQX4	1742 aa		31.84	■■■□□ 2.69
ACAA1-204	ENST00000418880	AKNA	Q7Z591	1439 aa		31.83	■■■□□ 2.69
ACAA1-204	ENST00000418880	RAPGEF3	O95398	923 aa		31.78	■■■□□ 2.68
ACAA1-204	ENST00000418880	DENND4B	O75064	1496 aa	Predicted RBP	31.76	■■■□□ 2.67
ACAA1-204	ENST00000418880	EFCAB2	Q5VUJ9	269 aa		31.74	■■■□□ 2.67
ACAA1-204	ENST00000418880	FRMPD1	Q5SYB0	1578 aa		31.73	■■■□□ 2.67
ACAA1-204	ENST00000418880	RICTOR	Q6R327	1708 aa		31.71	■■■□□ 2.67
ACAA1-204	ENST00000418880	ADGRL1	O94910	1474 aa		31.7	■■■□□ 2.66
ACAA1-204	ENST00000418880	ARHGAP5	Q13017	1502 aa		31.7	■■■□□ 2.66
ACAA1-204	ENST00000418880	KDM4F	A0A1W2PPD8	638 aa		31.69	■■■□□ 2.66
ACAA1-204	ENST00000418880	CDC42BPB	Q9Y5S2	1711 aa		31.66	■■■□□ 2.66

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