RNA–Protein interactions for RNA: ENST00000418880.1

ACAA1-204, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-204ENST00000418880 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
ACAA1-204ENST00000418880 CCDC180Q9P1Z9 1646 aa43.33■■■■■ 4.53
ACAA1-204ENST00000418880 ABCC9O60706 1549 aa42.53■■■■■ 4.4
ACAA1-204ENST00000418880 RB1CC1Q8TDY2 1594 aa40.87■■■■■ 4.13
ACAA1-204ENST00000418880 NACADO15069 1562 aa40.78■■■■■ 4.12
ACAA1-204ENST00000418880 DCAF8L2P0C7V8 631 aa40.67■■■■■ 4.1
ACAA1-204ENST00000418880 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
ACAA1-204ENST00000418880 ZCCHC6Q5VYS8 1495 aaKnown RBP40.43■■■■■ 4.06
ACAA1-204ENST00000418880 DCAF1Q9Y4B6 1507 aa40.22■■■■■ 4.03
ACAA1-204ENST00000418880 UNC13AQ9UPW8 1703 aa39.94■■■■□ 3.98
ACAA1-204ENST00000418880 PABPN1Q86U42 306 aaKnown RBP eCLIP39.69■■■■□ 3.94
ACAA1-204ENST00000418880 BICRAQ9NZM4 1560 aa39.6■■■■□ 3.93
ACAA1-204ENST00000418880 SCRIBQ14160 1630 aa39.47■■■■□ 3.91
ACAA1-204ENST00000418880 SHROOM4Q9ULL8 1493 aa39.23■■■■□ 3.87
ACAA1-204ENST00000418880 DNAJC5BQ9UF47 199 aa39.18■■■■□ 3.86
ACAA1-204ENST00000418880 EIF4G1Q04637 1599 aaKnown RBP38.59■■■■□ 3.77
ACAA1-204ENST00000418880 CC2D2AQ9P2K1 1620 aa38.49■■■■□ 3.75
ACAA1-204ENST00000418880 CECR2Q9BXF3 1484 aa38.25■■■■□ 3.71
ACAA1-204ENST00000418880 SMARCA4P51532 1647 aa37.76■■■■□ 3.63
ACAA1-204ENST00000418880 BAZ1AQ9NRL2 1556 aaPredicted RBP37.7■■■■□ 3.63
ACAA1-204ENST00000418880 NCAPD3P42695 1498 aa37.61■■■■□ 3.61
ACAA1-204ENST00000418880 ATAD2BQ9ULI0 1458 aa37.59■■■■□ 3.61
ACAA1-204ENST00000418880 SMARCA2P51531 1590 aa37.57■■■■□ 3.6
ACAA1-204ENST00000418880 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
ACAA1-204ENST00000418880 HMGXB3Q12766 1538 aa37.42■■■■□ 3.58
ACAA1-204ENST00000418880 PEG3Q9GZU2 1588 aa37.4■■■■□ 3.58
ACAA1-204ENST00000418880 BAZ1BQ9UIG0 1483 aaKnown RBP37.28■■■■□ 3.56
ACAA1-204ENST00000418880 WIZO95785 1651 aa37.02■■■■□ 3.52
ACAA1-204ENST00000418880 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
ACAA1-204ENST00000418880 NESP48681 1621 aa36.73■■■■□ 3.47
ACAA1-204ENST00000418880 ERCC6Q03468 1493 aa36.7■■■■□ 3.47
ACAA1-204ENST00000418880 LAMC3Q9Y6N6 1575 aa36.67■■■■□ 3.46
ACAA1-204ENST00000418880 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
ACAA1-204ENST00000418880 CADPSQ9ULU8 1353 aa36.51■■■■□ 3.43
ACAA1-204ENST00000418880 PDS5BQ9NTI5 1447 aa36.43■■■■□ 3.42
ACAA1-204ENST00000418880 CUX2O14529 1486 aa36.4■■■■□ 3.42
ACAA1-204ENST00000418880 KIF21AQ7Z4S6 1674 aa36.33■■■■□ 3.41
ACAA1-204ENST00000418880 THOC2Q8NI27 1593 aaKnown RBP36.25■■■■□ 3.39
ACAA1-204ENST00000418880 CFTRP13569 1480 aa36.24■■■■□ 3.39
ACAA1-204ENST00000418880 CCDC88BA6NC98 1476 aa36.19■■■■□ 3.38
ACAA1-204ENST00000418880 FANCD2Q9BXW9 1451 aa36.08■■■■□ 3.37
ACAA1-204ENST00000418880 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
ACAA1-204ENST00000418880 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
ACAA1-204ENST00000418880 PRDM2Q13029 1718 aa36.01■■■■□ 3.36
ACAA1-204ENST00000418880 WDR62O43379 1518 aa35.93■■■■□ 3.34
ACAA1-204ENST00000418880 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
ACAA1-204ENST00000418880 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
ACAA1-204ENST00000418880 ABCC8Q09428 1581 aa35.51■■■■□ 3.28
ACAA1-204ENST00000418880 DNAJC5Q9H3Z4 198 aa35.49■■■■□ 3.27
ACAA1-204ENST00000418880 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
ACAA1-204ENST00000418880 DNMBPQ6XZF7 1577 aa35.44■■■■□ 3.26
ACAA1-204ENST00000418880 IFT140Q96RY7 1462 aa35.32■■■■□ 3.24
ACAA1-204ENST00000418880 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
ACAA1-204ENST00000418880 ZNF608Q9ULD9 1512 aaPredicted RBP35.14■■■■□ 3.22
ACAA1-204ENST00000418880 CUX1P39880 1505 aa35.13■■■■□ 3.21
ACAA1-204ENST00000418880 TARBP1Q13395 1621 aaKnown RBP35.11■■■■□ 3.21
ACAA1-204ENST00000418880 FGD5Q6ZNL6 1462 aa35.04■■■■□ 3.2
ACAA1-204ENST00000418880 EIF4G3O43432 1585 aaKnown RBP35.02■■■■□ 3.2
ACAA1-204ENST00000418880 SOGA1O94964 1423 aa35.02■■■■□ 3.2
ACAA1-204ENST00000418880 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
ACAA1-204ENST00000418880 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.188e-7■■■■■ 31.8
ACAA1-204ENST00000418880 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
ACAA1-204ENST00000418880 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
ACAA1-204ENST00000418880 OSCARQ8IYS5 282 aa34.85■■■■□ 3.17
ACAA1-204ENST00000418880 TDRD9Q8NDG6 1382 aaKnown RBP34.83■■■■□ 3.17
ACAA1-204ENST00000418880 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
ACAA1-204ENST00000418880 TOP2BQ02880 1626 aa34.8■■■■□ 3.16
ACAA1-204ENST00000418880 SYNJ1O43426 1573 aa34.75■■■■□ 3.15
ACAA1-204ENST00000418880 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
ACAA1-204ENST00000418880 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
ACAA1-204ENST00000418880 CHD1O14646 1710 aa34.63■■■■□ 3.13
ACAA1-204ENST00000418880 GAPVD1Q14C86 1478 aa34.63■■■■□ 3.13
ACAA1-204ENST00000418880 SNAPC4Q5SXM2 1469 aa34.6■■■■□ 3.13
ACAA1-204ENST00000418880 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
ACAA1-204ENST00000418880 MAGI1Q96QZ7 1491 aaPredicted RBP34.58■■■■□ 3.13
ACAA1-204ENST00000418880 PBRM1Q86U86 1689 aa34.57■■■■□ 3.13
ACAA1-204ENST00000418880 FBLN2P98095 1184 aa34.56■■■■□ 3.12
ACAA1-204ENST00000418880 CHMP7Q8WUX9 453 aaPredicted RBP34.45■■■■□ 3.11
ACAA1-204ENST00000418880 SYNJ2O15056 1496 aa34.45■■■■□ 3.1
ACAA1-204ENST00000418880 ERICH3Q5RHP9 1530 aa34.31■■■■□ 3.08
ACAA1-204ENST00000418880 RIMBP3CA6NJZ7 1639 aa34.3■■■■□ 3.08
ACAA1-204ENST00000418880 RIMBP3BA6NNM3 1639 aa34.3■■■■□ 3.08
ACAA1-204ENST00000418880 RIMBP3Q9UFD9 1639 aa34.3■■■■□ 3.08
ACAA1-204ENST00000418880 ARHGEF11O15085 1522 aa34.27■■■■□ 3.08
ACAA1-204ENST00000418880 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
ACAA1-204ENST00000418880 CLASP1Q7Z460 1538 aa34.24■■■■□ 3.07
ACAA1-204ENST00000418880 TRIM41Q8WV44 630 aa34.23■■■■□ 3.07
ACAA1-204ENST00000418880 FHAD1B1AJZ9 1412 aa34.21■■■■□ 3.07
ACAA1-204ENST00000418880 GRIN2AQ12879 1464 aa34.2■■■■□ 3.06
ACAA1-204ENST00000418880 KIF27Q86VH2 1401 aa34.15■■■■□ 3.06
ACAA1-204ENST00000418880 NUP160Q12769 1436 aa34.05■■■■□ 3.04
ACAA1-204ENST00000418880 CEP170Q5SW79 1584 aa34.02■■■■□ 3.04
ACAA1-204ENST00000418880 IGF1RP08069 1367 aa34.01■■■■□ 3.04
ACAA1-204ENST00000418880 CUL7Q14999 1698 aa33.97■■■■□ 3.03
ACAA1-204ENST00000418880 ARAP1Q96P48 1450 aa33.97■■■■□ 3.03
ACAA1-204ENST00000418880 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
ACAA1-204ENST00000418880 SHROOM2Q13796 1616 aa33.82■■■■□ 3.01
ACAA1-204ENST00000418880 CARMIL1Q5VZK9 1371 aa33.82■■■■□ 3
ACAA1-204ENST00000418880 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
ACAA1-204ENST00000418880 ERCC6L2Q5T890 1561 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms