RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
LINC01006-202ENST00000418309 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
LINC01006-202ENST00000418309 PRG4Q92954 1404 aaPredicted RBP24.56■■□□□ 1.52
LINC01006-202ENST00000418309 IGF1RP08069 1367 aa24.53■■□□□ 1.52
LINC01006-202ENST00000418309 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
LINC01006-202ENST00000418309 CUL7Q14999 1698 aa24.45■■□□□ 1.5
LINC01006-202ENST00000418309 KIAA0586Q9BVV6 1533 aa24.4■■□□□ 1.5
LINC01006-202ENST00000418309 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
LINC01006-202ENST00000418309 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC01006-202ENST00000418309 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
LINC01006-202ENST00000418309 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
LINC01006-202ENST00000418309 ADCY10Q96PN6 1610 aa24.21■■□□□ 1.47
LINC01006-202ENST00000418309 FAM69CQ0P6D2 419 aa24.21■■□□□ 1.47
LINC01006-202ENST00000418309 PTPRGP23470 1445 aa24.2■■□□□ 1.46
LINC01006-202ENST00000418309 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
LINC01006-202ENST00000418309 IQGAP2Q13576 1575 aa24.18■■□□□ 1.46
LINC01006-202ENST00000418309 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
LINC01006-202ENST00000418309 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
LINC01006-202ENST00000418309 ABCC10Q5T3U5 1492 aa24.15■■□□□ 1.46
LINC01006-202ENST00000418309 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
LINC01006-202ENST00000418309 DIP2BQ9P265 1576 aa24.07■■□□□ 1.44
LINC01006-202ENST00000418309 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
LINC01006-202ENST00000418309 ABCC2Q92887 1545 aa24.01■■□□□ 1.43
LINC01006-202ENST00000418309 UGGT2Q9NYU1 1516 aa24■■□□□ 1.43
LINC01006-202ENST00000418309 UACAQ9BZF9 1416 aa24■■□□□ 1.43
LINC01006-202ENST00000418309 TSPOAP1O95153 1857 aa23.98■■□□□ 1.43
LINC01006-202ENST00000418309 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
LINC01006-202ENST00000418309 ASXL2Q76L83 1435 aa23.94■■□□□ 1.42
LINC01006-202ENST00000418309 KIAA0556O60303 1618 aa23.94■■□□□ 1.42
LINC01006-202ENST00000418309 CTTNBP2Q8WZ74 1663 aa23.93■■□□□ 1.42
LINC01006-202ENST00000418309 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
LINC01006-202ENST00000418309 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
LINC01006-202ENST00000418309 KDM6BO15054 1643 aa23.88■■□□□ 1.41
LINC01006-202ENST00000418309 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
LINC01006-202ENST00000418309 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
LINC01006-202ENST00000418309 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
LINC01006-202ENST00000418309 CSRNP3Q8WYN3 585 aa23.82■■□□□ 1.4
LINC01006-202ENST00000418309 GLI2P10070 1586 aa23.82■■□□□ 1.4
LINC01006-202ENST00000418309 FAM9AQ8IZU1 332 aaPredicted RBP23.78■■□□□ 1.4
LINC01006-202ENST00000418309 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
LINC01006-202ENST00000418309 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
LINC01006-202ENST00000418309 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
LINC01006-202ENST00000418309 ABCA8O94911 1581 aa23.71■■□□□ 1.39
LINC01006-202ENST00000418309 WDR7Q9Y4E6 1490 aa23.71■■□□□ 1.39
LINC01006-202ENST00000418309 KCNH8Q96L42 1107 aa23.7■■□□□ 1.38
LINC01006-202ENST00000418309 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.38
LINC01006-202ENST00000418309 EEA1Q15075 1411 aa23.67■■□□□ 1.38
LINC01006-202ENST00000418309 TEX14Q8IWB6 1497 aa23.67■■□□□ 1.38
LINC01006-202ENST00000418309 ARID3CA6NKF2 412 aa23.66■■□□□ 1.38
LINC01006-202ENST00000418309 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
LINC01006-202ENST00000418309 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
LINC01006-202ENST00000418309 COL17A1Q9UMD9 1497 aaPredicted RBP23.6■■□□□ 1.37
LINC01006-202ENST00000418309 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
LINC01006-202ENST00000418309 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
LINC01006-202ENST00000418309 ATP10BO94823 1461 aa23.56■■□□□ 1.36
LINC01006-202ENST00000418309 CFAP43Q8NDM7 1665 aa23.55■■□□□ 1.36
LINC01006-202ENST00000418309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
LINC01006-202ENST00000418309 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
LINC01006-202ENST00000418309 MAGI3Q5TCQ9 1506 aa23.52■■□□□ 1.36
LINC01006-202ENST00000418309 RAPGEF6Q8TEU7 1601 aa23.5■■□□□ 1.35
LINC01006-202ENST00000418309 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
LINC01006-202ENST00000418309 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
LINC01006-202ENST00000418309 KIF21BO75037 1637 aa23.46■■□□□ 1.35
LINC01006-202ENST00000418309 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
LINC01006-202ENST00000418309 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
LINC01006-202ENST00000418309 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
LINC01006-202ENST00000418309 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
LINC01006-202ENST00000418309 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
LINC01006-202ENST00000418309 EFCAB5A4FU69 1503 aa23.37■■□□□ 1.33
LINC01006-202ENST00000418309 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
LINC01006-202ENST00000418309 PHLDB1Q86UU1 1377 aa23.32■■□□□ 1.32
LINC01006-202ENST00000418309 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
LINC01006-202ENST00000418309 RAPGEF3O95398 923 aa23.28■■□□□ 1.32
LINC01006-202ENST00000418309 NEO1Q92859 1461 aa23.27■■□□□ 1.32
LINC01006-202ENST00000418309 FOXD1Q16676 465 aa23.22■■□□□ 1.31
LINC01006-202ENST00000418309 CDK13Q14004 1512 aaKnown RBP23.21■■□□□ 1.31
LINC01006-202ENST00000418309 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
LINC01006-202ENST00000418309 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
LINC01006-202ENST00000418309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
LINC01006-202ENST00000418309 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
LINC01006-202ENST00000418309 FANCAO15360 1455 aa23.15■■□□□ 1.3
LINC01006-202ENST00000418309 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
LINC01006-202ENST00000418309 HECW1Q76N89 1606 aa23.14■■□□□ 1.29
LINC01006-202ENST00000418309 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
LINC01006-202ENST00000418309 DENND4BO75064 1496 aaPredicted RBP23.13■■□□□ 1.29
LINC01006-202ENST00000418309 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
LINC01006-202ENST00000418309 FRMPD1Q5SYB0 1578 aa23.12■■□□□ 1.29
LINC01006-202ENST00000418309 CFAP74Q9C0B2 1584 aa23.12■■□□□ 1.29
LINC01006-202ENST00000418309 HECW2Q9P2P5 1572 aa23.07■■□□□ 1.28
LINC01006-202ENST00000418309 RICTORQ6R327 1708 aa23.06■■□□□ 1.28
LINC01006-202ENST00000418309 PLCH2O75038 1416 aa23.06■■□□□ 1.28
LINC01006-202ENST00000418309 EFCAB2Q5VUJ9 269 aa23.02■■□□□ 1.28
LINC01006-202ENST00000418309 ADAMTSL3P82987 1691 aa23.02■■□□□ 1.28
LINC01006-202ENST00000418309 SCAPERQ9BY12 1400 aa23.01■■□□□ 1.27
LINC01006-202ENST00000418309 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
LINC01006-202ENST00000418309 CLIP1P30622 1438 aa23■■□□□ 1.27
LINC01006-202ENST00000418309 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
LINC01006-202ENST00000418309 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
LINC01006-202ENST00000418309 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
LINC01006-202ENST00000418309 PTPRMP28827 1452 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms