RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 RIMBP3CA6NJZ7 1639 aa11.4□□□□□ -0.58
NCL-203ENST00000417652 RIMBP3BA6NNM3 1639 aa11.4□□□□□ -0.58
NCL-203ENST00000417652 RIMBP3Q9UFD9 1639 aa11.4□□□□□ -0.58
NCL-203ENST00000417652 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
NCL-203ENST00000417652 NUP160Q12769 1436 aa11.39□□□□□ -0.59
NCL-203ENST00000417652 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
NCL-203ENST00000417652 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
NCL-203ENST00000417652 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
NCL-203ENST00000417652 EEA1Q15075 1411 aa11.35□□□□□ -0.59
NCL-203ENST00000417652 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
NCL-203ENST00000417652 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
NCL-203ENST00000417652 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
NCL-203ENST00000417652 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
NCL-203ENST00000417652 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
NCL-203ENST00000417652 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
NCL-203ENST00000417652 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
NCL-203ENST00000417652 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
NCL-203ENST00000417652 PRXQ9BXM0 1461 aa11.28□□□□□ -0.6
NCL-203ENST00000417652 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.613e-10■■■■□ 19.7
NCL-203ENST00000417652 IQGAP2Q13576 1575 aa11.27□□□□□ -0.61
NCL-203ENST00000417652 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
NCL-203ENST00000417652 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
NCL-203ENST00000417652 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
NCL-203ENST00000417652 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
NCL-203ENST00000417652 PTPRGP23470 1445 aa11.23□□□□□ -0.61
NCL-203ENST00000417652 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
NCL-203ENST00000417652 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
NCL-203ENST00000417652 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
NCL-203ENST00000417652 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
NCL-203ENST00000417652 KIF21BO75037 1637 aa11.18□□□□□ -0.62
NCL-203ENST00000417652 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
NCL-203ENST00000417652 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
NCL-203ENST00000417652 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
NCL-203ENST00000417652 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
NCL-203ENST00000417652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
NCL-203ENST00000417652 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
NCL-203ENST00000417652 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
NCL-203ENST00000417652 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
NCL-203ENST00000417652 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
NCL-203ENST00000417652 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
NCL-203ENST00000417652 FHOD3Q2V2M9 1422 aa11.07□□□□□ -0.64
NCL-203ENST00000417652 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
NCL-203ENST00000417652 LOC105371045A0A1W2PR82 267 aa11.06□□□□□ -0.64
NCL-203ENST00000417652 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
NCL-203ENST00000417652 PLB1Q6P1J6 1458 aa11.06□□□□□ -0.64
NCL-203ENST00000417652 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
NCL-203ENST00000417652 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
NCL-203ENST00000417652 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
NCL-203ENST00000417652 PLPPR3Q6T4P5 718 aa11.03□□□□□ -0.64
NCL-203ENST00000417652 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
NCL-203ENST00000417652 CLIP1P30622 1438 aa11.01□□□□□ -0.65
NCL-203ENST00000417652 FMN1Q68DA7 1419 aa11.01□□□□□ -0.65
NCL-203ENST00000417652 MAPKBP1O60336 1514 aa11□□□□□ -0.65
NCL-203ENST00000417652 ABCA8O94911 1581 aa11□□□□□ -0.65
NCL-203ENST00000417652 KDM5BQ9UGL1 1544 aa10.99□□□□□ -0.65
NCL-203ENST00000417652 PLEKHD1A6NEE1 506 aa10.99□□□□□ -0.65
NCL-203ENST00000417652 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
NCL-203ENST00000417652 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
NCL-203ENST00000417652 ZCCHC11Q5TAX3 1644 aaKnown RBP10.98□□□□□ -0.65
NCL-203ENST00000417652 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
NCL-203ENST00000417652 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
NCL-203ENST00000417652 ATP10BO94823 1461 aa10.96□□□□□ -0.65
NCL-203ENST00000417652 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
NCL-203ENST00000417652 TSPOAP1O95153 1857 aa10.94□□□□□ -0.66
NCL-203ENST00000417652 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
NCL-203ENST00000417652 CEP162Q5TB80 1403 aa10.93□□□□□ -0.66
NCL-203ENST00000417652 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
NCL-203ENST00000417652 DIP2BQ9P265 1576 aa10.93□□□□□ -0.66
NCL-203ENST00000417652 NUP153P49790 1475 aaKnown RBP10.93□□□□□ -0.66
NCL-203ENST00000417652 ADRA2BP18089 450 aa10.92□□□□□ -0.66
NCL-203ENST00000417652 EPRSP07814 1512 aaKnown RBP10.92□□□□□ -0.66
NCL-203ENST00000417652 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
NCL-203ENST00000417652 CD109Q6YHK3 1445 aa10.89□□□□□ -0.67
NCL-203ENST00000417652 GLI2P10070 1586 aa10.88□□□□□ -0.67
NCL-203ENST00000417652 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
NCL-203ENST00000417652 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
NCL-203ENST00000417652 APLP2Q06481 763 aa10.86□□□□□ -0.67
NCL-203ENST00000417652 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
NCL-203ENST00000417652 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
NCL-203ENST00000417652 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
NCL-203ENST00000417652 PCF11O94913 1555 aaKnown RBP10.84□□□□□ -0.67
NCL-203ENST00000417652 CFAP43Q8NDM7 1665 aa10.83□□□□□ -0.68
NCL-203ENST00000417652 MAP3K4Q9Y6R4 1608 aa10.83□□□□□ -0.68
NCL-203ENST00000417652 KDM6BO15054 1643 aa10.81□□□□□ -0.68
NCL-203ENST00000417652 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
NCL-203ENST00000417652 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
NCL-203ENST00000417652 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
NCL-203ENST00000417652 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
NCL-203ENST00000417652 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
NCL-203ENST00000417652 ABCA9Q8IUA7 1624 aa10.79□□□□□ -0.68
NCL-203ENST00000417652 LRRIQ1Q96JM4 1722 aa10.78□□□□□ -0.68
NCL-203ENST00000417652 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.68
NCL-203ENST00000417652 KIF14Q15058 1648 aa10.77□□□□□ -0.68
NCL-203ENST00000417652 PPRC1Q5VV67 1664 aaKnown RBP10.77□□□□□ -0.69
NCL-203ENST00000417652 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
NCL-203ENST00000417652 ZNF777Q9ULD5 760 aaPredicted RBP10.77□□□□□ -0.69
NCL-203ENST00000417652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.77□□□□□ -0.698e-21■□□□□ 9.6
NCL-203ENST00000417652 RAPGEF3O95398 923 aa10.75□□□□□ -0.69
NCL-203ENST00000417652 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
NCL-203ENST00000417652 PLCH2O75038 1416 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms