RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-206ENST00000417540 IQGAP2Q13576 1575 aa17.63■□□□□ 0.41
HDLBP-206ENST00000417540 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
HDLBP-206ENST00000417540 PRG4Q92954 1404 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-206ENST00000417540 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
HDLBP-206ENST00000417540 ADCY10Q96PN6 1610 aa17.58■□□□□ 0.4
HDLBP-206ENST00000417540 RAPGEF2Q9Y4G8 1499 aa17.57■□□□□ 0.4
HDLBP-206ENST00000417540 KIAA0556O60303 1618 aa17.54■□□□□ 0.4
HDLBP-206ENST00000417540 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
HDLBP-206ENST00000417540 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
HDLBP-206ENST00000417540 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
HDLBP-206ENST00000417540 UGGT2Q9NYU1 1516 aa17.48■□□□□ 0.39
HDLBP-206ENST00000417540 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
HDLBP-206ENST00000417540 KIF21BO75037 1637 aa17.41■□□□□ 0.38
HDLBP-206ENST00000417540 DIP2BQ9P265 1576 aa17.39■□□□□ 0.37
HDLBP-206ENST00000417540 SAMD9Q5K651 1589 aa17.37■□□□□ 0.37
HDLBP-206ENST00000417540 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
HDLBP-206ENST00000417540 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
HDLBP-206ENST00000417540 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
HDLBP-206ENST00000417540 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
HDLBP-206ENST00000417540 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
HDLBP-206ENST00000417540 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
HDLBP-206ENST00000417540 EEA1Q15075 1411 aa17.34■□□□□ 0.37
HDLBP-206ENST00000417540 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
HDLBP-206ENST00000417540 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
HDLBP-206ENST00000417540 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
HDLBP-206ENST00000417540 PTPRGP23470 1445 aa17.3■□□□□ 0.36
HDLBP-206ENST00000417540 ABCA8O94911 1581 aa17.29■□□□□ 0.36
HDLBP-206ENST00000417540 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
HDLBP-206ENST00000417540 TSPOAP1O95153 1857 aa17.27■□□□□ 0.36
HDLBP-206ENST00000417540 PPRC1Q5VV67 1664 aaKnown RBP17.26■□□□□ 0.35
HDLBP-206ENST00000417540 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
HDLBP-206ENST00000417540 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
HDLBP-206ENST00000417540 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
HDLBP-206ENST00000417540 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
HDLBP-206ENST00000417540 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
HDLBP-206ENST00000417540 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.35
HDLBP-206ENST00000417540 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
HDLBP-206ENST00000417540 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.34
HDLBP-206ENST00000417540 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
HDLBP-206ENST00000417540 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
HDLBP-206ENST00000417540 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
HDLBP-206ENST00000417540 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
HDLBP-206ENST00000417540 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
HDLBP-206ENST00000417540 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
HDLBP-206ENST00000417540 GLI2P10070 1586 aa17.12■□□□□ 0.33
HDLBP-206ENST00000417540 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-206ENST00000417540 LRRIQ1Q96JM4 1722 aa17.12■□□□□ 0.33
HDLBP-206ENST00000417540 WDR7Q9Y4E6 1490 aa17.11■□□□□ 0.33
HDLBP-206ENST00000417540 NUP153P49790 1475 aaKnown RBP17.1■□□□□ 0.33
HDLBP-206ENST00000417540 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
HDLBP-206ENST00000417540 KDM6BO15054 1643 aa17.08■□□□□ 0.32
HDLBP-206ENST00000417540 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
HDLBP-206ENST00000417540 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
HDLBP-206ENST00000417540 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
HDLBP-206ENST00000417540 CFAP43Q8NDM7 1665 aa17.05■□□□□ 0.32
HDLBP-206ENST00000417540 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
HDLBP-206ENST00000417540 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDLBP-206ENST00000417540 ATP10BO94823 1461 aa17.03■□□□□ 0.32
HDLBP-206ENST00000417540 HECW1Q76N89 1606 aa17■□□□□ 0.31
HDLBP-206ENST00000417540 ABCA9Q8IUA7 1624 aa16.99■□□□□ 0.31
HDLBP-206ENST00000417540 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
HDLBP-206ENST00000417540 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
HDLBP-206ENST00000417540 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
HDLBP-206ENST00000417540 KIF14Q15058 1648 aa16.93■□□□□ 0.3
HDLBP-206ENST00000417540 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
HDLBP-206ENST00000417540 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
HDLBP-206ENST00000417540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■■□ 21.9
HDLBP-206ENST00000417540 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
HDLBP-206ENST00000417540 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
HDLBP-206ENST00000417540 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
HDLBP-206ENST00000417540 CD109Q6YHK3 1445 aa16.86■□□□□ 0.29
HDLBP-206ENST00000417540 CLIP1P30622 1438 aa16.85■□□□□ 0.29
HDLBP-206ENST00000417540 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
HDLBP-206ENST00000417540 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
HDLBP-206ENST00000417540 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
HDLBP-206ENST00000417540 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
HDLBP-206ENST00000417540 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
HDLBP-206ENST00000417540 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
HDLBP-206ENST00000417540 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.28
HDLBP-206ENST00000417540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-206ENST00000417540 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
HDLBP-206ENST00000417540 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
HDLBP-206ENST00000417540 CDC42BPAQ5VT25 1732 aa16.75■□□□□ 0.27
HDLBP-206ENST00000417540 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
HDLBP-206ENST00000417540 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
HDLBP-206ENST00000417540 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
HDLBP-206ENST00000417540 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-206ENST00000417540 ARHGEF40Q8TER5 1519 aa16.72■□□□□ 0.27
HDLBP-206ENST00000417540 ARAP3Q8WWN8 1544 aa16.72■□□□□ 0.27
HDLBP-206ENST00000417540 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-206ENST00000417540 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
HDLBP-206ENST00000417540 NEO1Q92859 1461 aa16.71■□□□□ 0.27
HDLBP-206ENST00000417540 FANCAO15360 1455 aa16.7■□□□□ 0.26
HDLBP-206ENST00000417540 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
HDLBP-206ENST00000417540 ITSN2Q9NZM3 1697 aa16.68■□□□□ 0.26
HDLBP-206ENST00000417540 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
HDLBP-206ENST00000417540 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
HDLBP-206ENST00000417540 LOC105371045A0A1W2PR82 267 aa16.65■□□□□ 0.26
HDLBP-206ENST00000417540 ABCC1P33527 1531 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms