RNA–Protein interactions for RNA: ENST00000417178.6

TUBGCP2-204, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 2 BASIC

Gene TUBGCP2, Length 4,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-204ENST00000417178 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
TUBGCP2-204ENST00000417178 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
TUBGCP2-204ENST00000417178 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
TUBGCP2-204ENST00000417178 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
TUBGCP2-204ENST00000417178 CFDP1Q9UEE9 299 aaPredicted RBP22.24■■□□□ 1.15
TUBGCP2-204ENST00000417178 SCAF1Q9H7N4 1312 aaKnown RBP22.23■■□□□ 1.15
TUBGCP2-204ENST00000417178 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
TUBGCP2-204ENST00000417178 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
TUBGCP2-204ENST00000417178 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
TUBGCP2-204ENST00000417178 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
TUBGCP2-204ENST00000417178 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
TUBGCP2-204ENST00000417178 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
TUBGCP2-204ENST00000417178 PDS5BQ9NTI5 1447 aa22.15■■□□□ 1.14
TUBGCP2-204ENST00000417178 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
TUBGCP2-204ENST00000417178 SALL2Q9Y467 1007 aaPredicted RBP22.14■■□□□ 1.13
TUBGCP2-204ENST00000417178 FHOD3Q2V2M9 1422 aa22.13■■□□□ 1.13
TUBGCP2-204ENST00000417178 RGL3Q3MIN7 710 aa22.13■■□□□ 1.13
TUBGCP2-204ENST00000417178 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
TUBGCP2-204ENST00000417178 FKBP8Q14318 412 aa22.09■■□□□ 1.13
TUBGCP2-204ENST00000417178 FOXD1Q16676 465 aa22.07■■□□□ 1.12
TUBGCP2-204ENST00000417178 PLPPR3Q6T4P5 718 aa22.05■■□□□ 1.12
TUBGCP2-204ENST00000417178 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
TUBGCP2-204ENST00000417178 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
TUBGCP2-204ENST00000417178 IGF1RP08069 1367 aa22.02■■□□□ 1.12
TUBGCP2-204ENST00000417178 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.11
TUBGCP2-204ENST00000417178 RAB3GAP2Q9H2M9 1393 aa22■■□□□ 1.11
TUBGCP2-204ENST00000417178 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
TUBGCP2-204ENST00000417178 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
TUBGCP2-204ENST00000417178 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
TUBGCP2-204ENST00000417178 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
TUBGCP2-204ENST00000417178 IRX6P78412 446 aaPredicted RBP21.96■■□□□ 1.11
TUBGCP2-204ENST00000417178 SETD5Q9C0A6 1442 aa21.94■■□□□ 1.1
TUBGCP2-204ENST00000417178 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
TUBGCP2-204ENST00000417178 CLSPNQ9HAW4 1339 aa21.93■■□□□ 1.1
TUBGCP2-204ENST00000417178 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
TUBGCP2-204ENST00000417178 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
TUBGCP2-204ENST00000417178 NESP48681 1621 aa21.9■■□□□ 1.1
TUBGCP2-204ENST00000417178 FMN1Q68DA7 1419 aa21.88■■□□□ 1.09
TUBGCP2-204ENST00000417178 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
TUBGCP2-204ENST00000417178 DAXXQ9UER7 740 aaPredicted RBP21.84■■□□□ 1.09
TUBGCP2-204ENST00000417178 BCL11AQ9H165 835 aa21.84■■□□□ 1.09
TUBGCP2-204ENST00000417178 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
TUBGCP2-204ENST00000417178 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
TUBGCP2-204ENST00000417178 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
TUBGCP2-204ENST00000417178 CFTRP13569 1480 aa21.8■■□□□ 1.08
TUBGCP2-204ENST00000417178 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.07
TUBGCP2-204ENST00000417178 KIF21BO75037 1637 aa21.76■■□□□ 1.07
TUBGCP2-204ENST00000417178 PKD2Q13563 968 aa21.75■■□□□ 1.07
TUBGCP2-204ENST00000417178 DCAF11Q8TEB1 546 aa21.75■■□□□ 1.07
TUBGCP2-204ENST00000417178 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.073e-7■■■■■ 31.5
TUBGCP2-204ENST00000417178 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
TUBGCP2-204ENST00000417178 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
TUBGCP2-204ENST00000417178 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
TUBGCP2-204ENST00000417178 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.077e-7■■■■■ 36
TUBGCP2-204ENST00000417178 CANXP27824 592 aaKnown RBP21.7■■□□□ 1.06
TUBGCP2-204ENST00000417178 CUX1P39880 1505 aa21.7■■□□□ 1.06
TUBGCP2-204ENST00000417178 CARMIL2Q6F5E8 1435 aa21.69■■□□□ 1.06
TUBGCP2-204ENST00000417178 PPP1R15AO75807 674 aaPredicted RBP21.69■■□□□ 1.06
TUBGCP2-204ENST00000417178 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
TUBGCP2-204ENST00000417178 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
TUBGCP2-204ENST00000417178 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
TUBGCP2-204ENST00000417178 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
TUBGCP2-204ENST00000417178 L3MBTL2Q969R5 705 aa21.65■■□□□ 1.06
TUBGCP2-204ENST00000417178 ZNF644Q9H582 1327 aaPredicted RBP21.63■■□□□ 1.05
TUBGCP2-204ENST00000417178 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
TUBGCP2-204ENST00000417178 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
TUBGCP2-204ENST00000417178 TIMELESSQ9UNS1 1208 aa21.61■■□□□ 1.05
TUBGCP2-204ENST00000417178 NUP155O75694 1391 aa21.6■■□□□ 1.05
TUBGCP2-204ENST00000417178 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
TUBGCP2-204ENST00000417178 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
TUBGCP2-204ENST00000417178 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.04
TUBGCP2-204ENST00000417178 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
TUBGCP2-204ENST00000417178 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
TUBGCP2-204ENST00000417178 GGT6Q6P531 493 aa21.55■■□□□ 1.04
TUBGCP2-204ENST00000417178 CCDC136Q96JN2 1154 aa21.55■■□□□ 1.04
TUBGCP2-204ENST00000417178 NEFMP07197 916 aa21.54■■□□□ 1.04
TUBGCP2-204ENST00000417178 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
TUBGCP2-204ENST00000417178 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
TUBGCP2-204ENST00000417178 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
TUBGCP2-204ENST00000417178 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
TUBGCP2-204ENST00000417178 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
TUBGCP2-204ENST00000417178 MLECQ14165 292 aa21.48■■□□□ 1.03
TUBGCP2-204ENST00000417178 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
TUBGCP2-204ENST00000417178 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
TUBGCP2-204ENST00000417178 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
TUBGCP2-204ENST00000417178 ANKRD30AQ9BXX3 1397 aa21.47■■□□□ 1.03
TUBGCP2-204ENST00000417178 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
TUBGCP2-204ENST00000417178 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.03
TUBGCP2-204ENST00000417178 ARID4BQ4LE39 1312 aaPredicted RBP21.45■■□□□ 1.02
TUBGCP2-204ENST00000417178 RTL5Q5HYW3 569 aaPredicted RBP21.45■■□□□ 1.02
TUBGCP2-204ENST00000417178 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
TUBGCP2-204ENST00000417178 FGD6Q6ZV73 1430 aa21.43■■□□□ 1.02
TUBGCP2-204ENST00000417178 PTPRGP23470 1445 aa21.43■■□□□ 1.02
TUBGCP2-204ENST00000417178 NEUROD2Q15784 382 aa21.42■■□□□ 1.02
TUBGCP2-204ENST00000417178 KIF3BO15066 747 aa21.42■■□□□ 1.02
TUBGCP2-204ENST00000417178 MYT1Q01538 1121 aa21.38■■□□□ 1.01
TUBGCP2-204ENST00000417178 PPM1GO15355 546 aaPredicted RBP21.37■■□□□ 1.01
TUBGCP2-204ENST00000417178 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
TUBGCP2-204ENST00000417178 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
TUBGCP2-204ENST00000417178 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms