RNA–Protein interactions for RNA: ENST00000417178.6

TUBGCP2-204, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 2 BASIC

Gene TUBGCP2, Length 4,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-204ENST00000417178 NISCHQ9Y2I1 1504 aa29.93■■■□□ 2.38
TUBGCP2-204ENST00000417178 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
TUBGCP2-204ENST00000417178 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
TUBGCP2-204ENST00000417178 SUPT5HO00267 1087 aaKnown RBP27.84■■■□□ 2.05
TUBGCP2-204ENST00000417178 EHMT2Q96KQ7 1210 aa26.62■■□□□ 1.85
TUBGCP2-204ENST00000417178 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.77
TUBGCP2-204ENST00000417178 PCGF6Q9BYE7 350 aa25.65■■□□□ 1.7
TUBGCP2-204ENST00000417178 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
TUBGCP2-204ENST00000417178 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
TUBGCP2-204ENST00000417178 ABCC9O60706 1549 aa25.44■■□□□ 1.66
TUBGCP2-204ENST00000417178 CHIC1Q5VXU3 224 aa25.38■■□□□ 1.65
TUBGCP2-204ENST00000417178 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
TUBGCP2-204ENST00000417178 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
TUBGCP2-204ENST00000417178 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
TUBGCP2-204ENST00000417178 APLP2Q06481 763 aa25.09■■□□□ 1.61
TUBGCP2-204ENST00000417178 PABPN1Q86U42 306 aaKnown RBP eCLIP25.07■■□□□ 1.66e-7■■■■□ 22.8
TUBGCP2-204ENST00000417178 UBTFP17480 764 aaKnown RBP25.05■■□□□ 1.6
TUBGCP2-204ENST00000417178 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.58
TUBGCP2-204ENST00000417178 ATP1B4Q9UN42 357 aaPredicted RBP24.71■■□□□ 1.55
TUBGCP2-204ENST00000417178 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
TUBGCP2-204ENST00000417178 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
TUBGCP2-204ENST00000417178 TRIM26Q12899 539 aaPredicted RBP24.55■■□□□ 1.52
TUBGCP2-204ENST00000417178 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
TUBGCP2-204ENST00000417178 HRCP23327 699 aa24.39■■□□□ 1.5
TUBGCP2-204ENST00000417178 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
TUBGCP2-204ENST00000417178 ITGAEP38570 1179 aa24.23■■□□□ 1.47
TUBGCP2-204ENST00000417178 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
TUBGCP2-204ENST00000417178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
TUBGCP2-204ENST00000417178 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
TUBGCP2-204ENST00000417178 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
TUBGCP2-204ENST00000417178 YTHDC1Q96MU7 727 aaKnown RBP23.92■■□□□ 1.42
TUBGCP2-204ENST00000417178 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
TUBGCP2-204ENST00000417178 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
TUBGCP2-204ENST00000417178 CENPBP07199 599 aaPredicted RBP23.71■■□□□ 1.39
TUBGCP2-204ENST00000417178 RB1CC1Q8TDY2 1594 aa23.7■■□□□ 1.38
TUBGCP2-204ENST00000417178 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
TUBGCP2-204ENST00000417178 NACADO15069 1562 aa23.65■■□□□ 1.38
TUBGCP2-204ENST00000417178 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.37
TUBGCP2-204ENST00000417178 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
TUBGCP2-204ENST00000417178 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
TUBGCP2-204ENST00000417178 FBLN2P98095 1184 aa23.48■■□□□ 1.35
TUBGCP2-204ENST00000417178 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
TUBGCP2-204ENST00000417178 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
TUBGCP2-204ENST00000417178 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
TUBGCP2-204ENST00000417178 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.33
TUBGCP2-204ENST00000417178 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
TUBGCP2-204ENST00000417178 POLR3GLQ9BT43 218 aa23.33■■□□□ 1.33
TUBGCP2-204ENST00000417178 MYT1LQ9UL68 1186 aa23.3■■□□□ 1.32
TUBGCP2-204ENST00000417178 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
TUBGCP2-204ENST00000417178 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
TUBGCP2-204ENST00000417178 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
TUBGCP2-204ENST00000417178 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
TUBGCP2-204ENST00000417178 SOGA1O94964 1423 aa23.1■■□□□ 1.29
TUBGCP2-204ENST00000417178 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
TUBGCP2-204ENST00000417178 CLIP1P30622 1438 aa23.08■■□□□ 1.29
TUBGCP2-204ENST00000417178 WIZO95785 1651 aa23.07■■□□□ 1.28
TUBGCP2-204ENST00000417178 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
TUBGCP2-204ENST00000417178 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
TUBGCP2-204ENST00000417178 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
TUBGCP2-204ENST00000417178 NEFLP07196 543 aa23■■□□□ 1.27
TUBGCP2-204ENST00000417178 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
TUBGCP2-204ENST00000417178 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
TUBGCP2-204ENST00000417178 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
TUBGCP2-204ENST00000417178 EEA1Q15075 1411 aa22.88■■□□□ 1.25
TUBGCP2-204ENST00000417178 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
TUBGCP2-204ENST00000417178 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
TUBGCP2-204ENST00000417178 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
TUBGCP2-204ENST00000417178 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
TUBGCP2-204ENST00000417178 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
TUBGCP2-204ENST00000417178 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
TUBGCP2-204ENST00000417178 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
TUBGCP2-204ENST00000417178 HIRIP3Q9BW71 556 aaPredicted RBP22.68■■□□□ 1.22
TUBGCP2-204ENST00000417178 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
TUBGCP2-204ENST00000417178 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
TUBGCP2-204ENST00000417178 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
TUBGCP2-204ENST00000417178 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
TUBGCP2-204ENST00000417178 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
TUBGCP2-204ENST00000417178 CUX2O14529 1486 aa22.63■■□□□ 1.21
TUBGCP2-204ENST00000417178 BCANQ96GW7 911 aa22.63■■□□□ 1.21
TUBGCP2-204ENST00000417178 SLC4A1APQ9BWU0 796 aaKnown RBP22.61■■□□□ 1.21
TUBGCP2-204ENST00000417178 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
TUBGCP2-204ENST00000417178 ANP32CO43423 234 aa22.6■■□□□ 1.21
TUBGCP2-204ENST00000417178 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
TUBGCP2-204ENST00000417178 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
TUBGCP2-204ENST00000417178 KANK4Q5T7N3 995 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP2-204ENST00000417178 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
TUBGCP2-204ENST00000417178 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
TUBGCP2-204ENST00000417178 ERICH6Q7L0X2 663 aa22.55■■□□□ 1.2
TUBGCP2-204ENST00000417178 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
TUBGCP2-204ENST00000417178 MIER1Q8N108 512 aa22.51■■□□□ 1.19
TUBGCP2-204ENST00000417178 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
TUBGCP2-204ENST00000417178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.182e-9■□□□□ 9.6
TUBGCP2-204ENST00000417178 SIN3AQ96ST3 1273 aa22.41■■□□□ 1.18
TUBGCP2-204ENST00000417178 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
TUBGCP2-204ENST00000417178 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.18
TUBGCP2-204ENST00000417178 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
TUBGCP2-204ENST00000417178 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
TUBGCP2-204ENST00000417178 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
TUBGCP2-204ENST00000417178 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
TUBGCP2-204ENST00000417178 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms