RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
CPNE1-210ENST00000416778 KIAA0586Q9BVV6 1533 aa30.71■■■□□ 2.51
CPNE1-210ENST00000416778 CUL7Q14999 1698 aa30.68■■■□□ 2.5
CPNE1-210ENST00000416778 RUSC2Q8N2Y8 1516 aa30.67■■■□□ 2.5
CPNE1-210ENST00000416778 NPM1P06748 294 aaKnown RBP eCLIP30.47■■■□□ 2.47
CPNE1-210ENST00000416778 RAPGEF2Q9Y4G8 1499 aa30.45■■■□□ 2.47
CPNE1-210ENST00000416778 PTPRGP23470 1445 aa30.41■■■□□ 2.46
CPNE1-210ENST00000416778 CARMIL2Q6F5E8 1435 aa30.38■■■□□ 2.45
CPNE1-210ENST00000416778 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
CPNE1-210ENST00000416778 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-210ENST00000416778 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
CPNE1-210ENST00000416778 ADCY10Q96PN6 1610 aa30.31■■■□□ 2.44
CPNE1-210ENST00000416778 FAM69CQ0P6D2 419 aa30.3■■■□□ 2.44
CPNE1-210ENST00000416778 DISP1Q96F81 1524 aa30.27■■■□□ 2.44
CPNE1-210ENST00000416778 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
CPNE1-210ENST00000416778 ABCC10Q5T3U5 1492 aa30.24■■■□□ 2.43
CPNE1-210ENST00000416778 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
CPNE1-210ENST00000416778 UGGT2Q9NYU1 1516 aa30.23■■■□□ 2.43
CPNE1-210ENST00000416778 CSRNP3Q8WYN3 585 aa30.21■■■□□ 2.43
CPNE1-210ENST00000416778 KIF13AQ9H1H9 1805 aa30.17■■■□□ 2.42
CPNE1-210ENST00000416778 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
CPNE1-210ENST00000416778 UHRF1BP1LA0JNW5 1464 aa30.13■■■□□ 2.41
CPNE1-210ENST00000416778 ABCC2Q92887 1545 aa30.12■■■□□ 2.41
CPNE1-210ENST00000416778 DIP2BQ9P265 1576 aa30.06■■■□□ 2.4
CPNE1-210ENST00000416778 KIAA0556O60303 1618 aa30.05■■■□□ 2.4
CPNE1-210ENST00000416778 ASXL2Q76L83 1435 aa30.02■■■□□ 2.4
CPNE1-210ENST00000416778 GOLGA3Q08378 1498 aa30■■■□□ 2.39
CPNE1-210ENST00000416778 PLB1Q6P1J6 1458 aa29.99■■■□□ 2.39
CPNE1-210ENST00000416778 KDM5BQ9UGL1 1544 aa29.99■■■□□ 2.39
CPNE1-210ENST00000416778 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
CPNE1-210ENST00000416778 EEA1Q15075 1411 aa29.97■■■□□ 2.39
CPNE1-210ENST00000416778 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
CPNE1-210ENST00000416778 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
CPNE1-210ENST00000416778 P3H3Q8IVL6 736 aa29.92■■■□□ 2.38
CPNE1-210ENST00000416778 GLI2P10070 1586 aa29.86■■■□□ 2.37
CPNE1-210ENST00000416778 EPRSP07814 1512 aaKnown RBP29.83■■■□□ 2.37
CPNE1-210ENST00000416778 ABCA8O94911 1581 aa29.82■■■□□ 2.36
CPNE1-210ENST00000416778 ZCCHC11Q5TAX3 1644 aaKnown RBP29.82■■■□□ 2.36
CPNE1-210ENST00000416778 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
CPNE1-210ENST00000416778 TSPOAP1O95153 1857 aa29.8■■■□□ 2.36
CPNE1-210ENST00000416778 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
CPNE1-210ENST00000416778 KCNH8Q96L42 1107 aa29.75■■■□□ 2.35
CPNE1-210ENST00000416778 WDR7Q9Y4E6 1490 aa29.73■■■□□ 2.35
CPNE1-210ENST00000416778 KDM6BO15054 1643 aa29.71■■■□□ 2.35
CPNE1-210ENST00000416778 ARID3CA6NKF2 412 aa29.69■■■□□ 2.34
CPNE1-210ENST00000416778 SAMD9Q5K651 1589 aa29.69■■■□□ 2.34
CPNE1-210ENST00000416778 ATP10BO94823 1461 aa29.68■■■□□ 2.34
CPNE1-210ENST00000416778 PPRC1Q5VV67 1664 aaKnown RBP29.67■■■□□ 2.34
CPNE1-210ENST00000416778 MAP3K4Q9Y6R4 1608 aa29.63■■■□□ 2.33
CPNE1-210ENST00000416778 COL17A1Q9UMD9 1497 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-210ENST00000416778 KIF21BO75037 1637 aa29.63■■■□□ 2.33
CPNE1-210ENST00000416778 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
CPNE1-210ENST00000416778 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
CPNE1-210ENST00000416778 CD109Q6YHK3 1445 aa29.6■■■□□ 2.33
CPNE1-210ENST00000416778 FHOD3Q2V2M9 1422 aa29.58■■■□□ 2.33
CPNE1-210ENST00000416778 TEX14Q8IWB6 1497 aa29.58■■■□□ 2.33
CPNE1-210ENST00000416778 KDM4FA0A1W2PPD8 638 aa29.53■■■□□ 2.32
CPNE1-210ENST00000416778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-210ENST00000416778 HNRNPUL2Q1KMD3 747 aaKnown RBP29.53■■■□□ 2.32
CPNE1-210ENST00000416778 MAGI3Q5TCQ9 1506 aa29.52■■■□□ 2.32
CPNE1-210ENST00000416778 RAPGEF6Q8TEU7 1601 aa29.5■■■□□ 2.31
CPNE1-210ENST00000416778 NUP153P49790 1475 aaKnown RBP29.48■■■□□ 2.31
CPNE1-210ENST00000416778 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
CPNE1-210ENST00000416778 EFCAB5A4FU69 1503 aa29.44■■■□□ 2.3
CPNE1-210ENST00000416778 CFAP43Q8NDM7 1665 aa29.44■■■□□ 2.3
CPNE1-210ENST00000416778 ARHGAP35Q9NRY4 1499 aa29.33■■■□□ 2.29
CPNE1-210ENST00000416778 ABCA9Q8IUA7 1624 aa29.32■■■□□ 2.28
CPNE1-210ENST00000416778 PHLDB1Q86UU1 1377 aa29.32■■■□□ 2.28
CPNE1-210ENST00000416778 ARAP3Q8WWN8 1544 aa29.3■■■□□ 2.28
CPNE1-210ENST00000416778 ATP1B4Q9UN42 357 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-210ENST00000416778 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
CPNE1-210ENST00000416778 RAPGEF3O95398 923 aa29.23■■■□□ 2.27
CPNE1-210ENST00000416778 NEO1Q92859 1461 aa29.2■■■□□ 2.26
CPNE1-210ENST00000416778 ADGRL1O94910 1474 aa29.18■■■□□ 2.26
CPNE1-210ENST00000416778 CDK13Q14004 1512 aaKnown RBP29.18■■■□□ 2.26
CPNE1-210ENST00000416778 CDK11AQ9UQ88 783 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-210ENST00000416778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.14■■■□□ 2.251e-38■■□□□ 13.2
CPNE1-210ENST00000416778 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
CPNE1-210ENST00000416778 HECW1Q76N89 1606 aa29.05■■■□□ 2.24
CPNE1-210ENST00000416778 FANCAO15360 1455 aa29.05■■■□□ 2.24
CPNE1-210ENST00000416778 PLCH2O75038 1416 aa29.05■■■□□ 2.24
CPNE1-210ENST00000416778 DENND4BO75064 1496 aaPredicted RBP29.02■■■□□ 2.24
CPNE1-210ENST00000416778 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.24
CPNE1-210ENST00000416778 CASKIN1Q8WXD9 1431 aa29.01■■■□□ 2.23
CPNE1-210ENST00000416778 EFCAB2Q5VUJ9 269 aa28.99■■■□□ 2.23
CPNE1-210ENST00000416778 TROQ12816 1431 aaPredicted RBP28.99■■■□□ 2.23
CPNE1-210ENST00000416778 CLIP1P30622 1438 aa28.97■■■□□ 2.23
CPNE1-210ENST00000416778 FRMPD1Q5SYB0 1578 aa28.96■■■□□ 2.23
CPNE1-210ENST00000416778 SCAPERQ9BY12 1400 aa28.92■■■□□ 2.22
CPNE1-210ENST00000416778 CFAP74Q9C0B2 1584 aa28.89■■■□□ 2.22
CPNE1-210ENST00000416778 LRRIQ1Q96JM4 1722 aa28.89■■■□□ 2.21
CPNE1-210ENST00000416778 ARID4BQ4LE39 1312 aaPredicted RBP28.88■■■□□ 2.21
CPNE1-210ENST00000416778 KIF14Q15058 1648 aa28.87■■■□□ 2.21
CPNE1-210ENST00000416778 RICTORQ6R327 1708 aa28.86■■■□□ 2.21
CPNE1-210ENST00000416778 CCDC18Q5T9S5 1454 aa28.86■■■□□ 2.21
CPNE1-210ENST00000416778 PCF11O94913 1555 aaKnown RBP28.85■■■□□ 2.21
CPNE1-210ENST00000416778 FYCO1Q9BQS8 1478 aa28.82■■■□□ 2.2
CPNE1-210ENST00000416778 MAGI2Q86UL8 1455 aa28.81■■■□□ 2.2
CPNE1-210ENST00000416778 POGZQ7Z3K3 1410 aa28.8■■■□□ 2.2
CPNE1-210ENST00000416778 YEATS2Q9ULM3 1422 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms