RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
RBM39-208ENST00000416108 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
RBM39-208ENST00000416108 NUP160Q12769 1436 aa13.47□□□□□ -0.25
RBM39-208ENST00000416108 KIAA0586Q9BVV6 1533 aa13.45□□□□□ -0.26
RBM39-208ENST00000416108 CEP162Q5TB80 1403 aa13.45□□□□□ -0.26
RBM39-208ENST00000416108 RANGAP1P46060 587 aaPredicted RBP13.43□□□□□ -0.26
RBM39-208ENST00000416108 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
RBM39-208ENST00000416108 CLIP1P30622 1438 aa13.42□□□□□ -0.26
RBM39-208ENST00000416108 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
RBM39-208ENST00000416108 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
RBM39-208ENST00000416108 UGGT2Q9NYU1 1516 aa13.39□□□□□ -0.27
RBM39-208ENST00000416108 SHROOM2Q13796 1616 aa13.37□□□□□ -0.27
RBM39-208ENST00000416108 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
RBM39-208ENST00000416108 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
RBM39-208ENST00000416108 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
RBM39-208ENST00000416108 CARMIL2Q6F5E8 1435 aa13.34□□□□□ -0.27
RBM39-208ENST00000416108 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
RBM39-208ENST00000416108 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
RBM39-208ENST00000416108 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
RBM39-208ENST00000416108 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
RBM39-208ENST00000416108 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
RBM39-208ENST00000416108 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
RBM39-208ENST00000416108 VPS8Q8N3P4 1428 aa13.27□□□□□ -0.29
RBM39-208ENST00000416108 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
RBM39-208ENST00000416108 PCF11O94913 1555 aaKnown RBP13.24□□□□□ -0.29
RBM39-208ENST00000416108 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
RBM39-208ENST00000416108 TTBK1Q5TCY1 1321 aaPredicted RBP13.22□□□□□ -0.29
RBM39-208ENST00000416108 HECW1Q76N89 1606 aa13.22□□□□□ -0.29
RBM39-208ENST00000416108 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
RBM39-208ENST00000416108 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
RBM39-208ENST00000416108 APLP2Q06481 763 aa13.19□□□□□ -0.3
RBM39-208ENST00000416108 PTPRGP23470 1445 aa13.19□□□□□ -0.3
RBM39-208ENST00000416108 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
RBM39-208ENST00000416108 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
RBM39-208ENST00000416108 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
RBM39-208ENST00000416108 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
RBM39-208ENST00000416108 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
RBM39-208ENST00000416108 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
RBM39-208ENST00000416108 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
RBM39-208ENST00000416108 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
RBM39-208ENST00000416108 ABCA8O94911 1581 aa13.15□□□□□ -0.3
RBM39-208ENST00000416108 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
RBM39-208ENST00000416108 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
RBM39-208ENST00000416108 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
RBM39-208ENST00000416108 UACAQ9BZF9 1416 aa13.12□□□□□ -0.31
RBM39-208ENST00000416108 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
RBM39-208ENST00000416108 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
RBM39-208ENST00000416108 NUP153P49790 1475 aaKnown RBP13.09□□□□□ -0.31
RBM39-208ENST00000416108 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.31
RBM39-208ENST00000416108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
RBM39-208ENST00000416108 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
RBM39-208ENST00000416108 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
RBM39-208ENST00000416108 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
RBM39-208ENST00000416108 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
RBM39-208ENST00000416108 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
RBM39-208ENST00000416108 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
RBM39-208ENST00000416108 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
RBM39-208ENST00000416108 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
RBM39-208ENST00000416108 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
RBM39-208ENST00000416108 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
RBM39-208ENST00000416108 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
RBM39-208ENST00000416108 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
RBM39-208ENST00000416108 ATP10BO94823 1461 aa13.01□□□□□ -0.33
RBM39-208ENST00000416108 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
RBM39-208ENST00000416108 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
RBM39-208ENST00000416108 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
RBM39-208ENST00000416108 KIF14Q15058 1648 aa12.98□□□□□ -0.33
RBM39-208ENST00000416108 PLEKHD1A6NEE1 506 aa12.97□□□□□ -0.33
RBM39-208ENST00000416108 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
RBM39-208ENST00000416108 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
RBM39-208ENST00000416108 MAGI3Q5TCQ9 1506 aa12.96□□□□□ -0.33
RBM39-208ENST00000416108 ITSN2Q9NZM3 1697 aa12.95□□□□□ -0.34
RBM39-208ENST00000416108 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
RBM39-208ENST00000416108 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
RBM39-208ENST00000416108 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
RBM39-208ENST00000416108 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
RBM39-208ENST00000416108 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
RBM39-208ENST00000416108 CDC42BPAQ5VT25 1732 aa12.9□□□□□ -0.34
RBM39-208ENST00000416108 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
RBM39-208ENST00000416108 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
RBM39-208ENST00000416108 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
RBM39-208ENST00000416108 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
RBM39-208ENST00000416108 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
RBM39-208ENST00000416108 ABCA9Q8IUA7 1624 aa12.85□□□□□ -0.35
RBM39-208ENST00000416108 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.85□□□□□ -0.35
RBM39-208ENST00000416108 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
RBM39-208ENST00000416108 CDC42BPBQ9Y5S2 1711 aa12.85□□□□□ -0.35
RBM39-208ENST00000416108 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
RBM39-208ENST00000416108 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
RBM39-208ENST00000416108 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
RBM39-208ENST00000416108 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
RBM39-208ENST00000416108 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
RBM39-208ENST00000416108 FGD6Q6ZV73 1430 aa12.81□□□□□ -0.36
RBM39-208ENST00000416108 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
RBM39-208ENST00000416108 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
RBM39-208ENST00000416108 TSPOAP1O95153 1857 aa12.8□□□□□ -0.36
RBM39-208ENST00000416108 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
RBM39-208ENST00000416108 RRBP1Q9P2E9 1410 aaKnown RBP12.8□□□□□ -0.36
RBM39-208ENST00000416108 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
RBM39-208ENST00000416108 GLI2P10070 1586 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms