RNA–Protein interactions for RNA: ENST00000415942.5

RBCK1-209, Transcript of RANBP2-type and C3HC4-type zinc finger containing 1, humanhuman

TSL 5

Gene RBCK1, Length 2,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBCK1-209ENST00000415942 TRIM52Q96A61 297 aa24.64■■□□□ 1.53
RBCK1-209ENST00000415942 NEFLP07196 543 aa24.63■■□□□ 1.53
RBCK1-209ENST00000415942 CCNB3Q8WWL7 1395 aa24.61■■□□□ 1.53
RBCK1-209ENST00000415942 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
RBCK1-209ENST00000415942 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
RBCK1-209ENST00000415942 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
RBCK1-209ENST00000415942 HIRIP3Q9BW71 556 aaPredicted RBP24.58■■□□□ 1.52
RBCK1-209ENST00000415942 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.52
RBCK1-209ENST00000415942 RAB3GAP2Q9H2M9 1393 aa24.57■■□□□ 1.52
RBCK1-209ENST00000415942 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
RBCK1-209ENST00000415942 MSH5O43196 834 aa24.54■■□□□ 1.52
RBCK1-209ENST00000415942 ATP1B4Q9UN42 357 aaPredicted RBP24.53■■□□□ 1.52
RBCK1-209ENST00000415942 MAPKBP1O60336 1514 aa24.52■■□□□ 1.52
RBCK1-209ENST00000415942 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
RBCK1-209ENST00000415942 PRDM2Q13029 1718 aa24.52■■□□□ 1.52
RBCK1-209ENST00000415942 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
RBCK1-209ENST00000415942 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
RBCK1-209ENST00000415942 RAD54L2Q9Y4B4 1467 aa24.44■■□□□ 1.5
RBCK1-209ENST00000415942 ANP32CO43423 234 aa24.41■■□□□ 1.5
RBCK1-209ENST00000415942 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
RBCK1-209ENST00000415942 CCER2I3L3R5 266 aa24.39■■□□□ 1.49
RBCK1-209ENST00000415942 NESP48681 1621 aa24.39■■□□□ 1.49
RBCK1-209ENST00000415942 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
RBCK1-209ENST00000415942 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
RBCK1-209ENST00000415942 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
RBCK1-209ENST00000415942 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
RBCK1-209ENST00000415942 IRX6P78412 446 aaPredicted RBP24.34■■□□□ 1.49
RBCK1-209ENST00000415942 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
RBCK1-209ENST00000415942 FHOD3Q2V2M9 1422 aa24.32■■□□□ 1.48
RBCK1-209ENST00000415942 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
RBCK1-209ENST00000415942 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
RBCK1-209ENST00000415942 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
RBCK1-209ENST00000415942 FANCIQ9NVI1 1328 aa24.26■■□□□ 1.47
RBCK1-209ENST00000415942 ERICH6Q7L0X2 663 aa24.25■■□□□ 1.47
RBCK1-209ENST00000415942 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
RBCK1-209ENST00000415942 MAP3K1Q13233 1512 aa24.24■■□□□ 1.47
RBCK1-209ENST00000415942 PCF11O94913 1555 aaKnown RBP24.24■■□□□ 1.47
RBCK1-209ENST00000415942 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
RBCK1-209ENST00000415942 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
RBCK1-209ENST00000415942 HNRNPUQ00839 825 aaKnown RBP eCLIP24.21■■□□□ 1.47
RBCK1-209ENST00000415942 TIMELESSQ9UNS1 1208 aa24.2■■□□□ 1.47
RBCK1-209ENST00000415942 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
RBCK1-209ENST00000415942 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
RBCK1-209ENST00000415942 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
RBCK1-209ENST00000415942 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
RBCK1-209ENST00000415942 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
RBCK1-209ENST00000415942 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.45
RBCK1-209ENST00000415942 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
RBCK1-209ENST00000415942 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
RBCK1-209ENST00000415942 EFCAB5A4FU69 1503 aa24.03■■□□□ 1.44
RBCK1-209ENST00000415942 CUL7Q14999 1698 aa24.02■■□□□ 1.44
RBCK1-209ENST00000415942 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
RBCK1-209ENST00000415942 DEKP35659 375 aaKnown RBP24■■□□□ 1.43
RBCK1-209ENST00000415942 FMN1Q68DA7 1419 aa24■■□□□ 1.43
RBCK1-209ENST00000415942 PPP4R2Q9NY27 417 aa23.98■■□□□ 1.43
RBCK1-209ENST00000415942 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
RBCK1-209ENST00000415942 CTTNBP2Q8WZ74 1663 aa23.97■■□□□ 1.43
RBCK1-209ENST00000415942 B4GALNT3Q6L9W6 998 aa23.97■■□□□ 1.43
RBCK1-209ENST00000415942 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.432e-7■■■■■ 36.8
RBCK1-209ENST00000415942 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.43
RBCK1-209ENST00000415942 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
RBCK1-209ENST00000415942 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
RBCK1-209ENST00000415942 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
RBCK1-209ENST00000415942 ERICH6BQ5W0A0 696 aa23.89■■□□□ 1.42
RBCK1-209ENST00000415942 ARID3CA6NKF2 412 aa23.89■■□□□ 1.41
RBCK1-209ENST00000415942 WASHC2AQ641Q2 1341 aa23.88■■□□□ 1.41
RBCK1-209ENST00000415942 NBR1Q14596 966 aa23.88■■□□□ 1.41
RBCK1-209ENST00000415942 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
RBCK1-209ENST00000415942 ABCA5Q8WWZ7 1642 aa23.87■■□□□ 1.41
RBCK1-209ENST00000415942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.87■■□□□ 1.415e-8■■■□□ 14.9
RBCK1-209ENST00000415942 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
RBCK1-209ENST00000415942 FAM9BQ8IZU0 186 aa23.85■■□□□ 1.41
RBCK1-209ENST00000415942 HSPA5P11021 654 aaKnown RBP23.84■■□□□ 1.41
RBCK1-209ENST00000415942 NCOA2Q15596 1464 aa23.84■■□□□ 1.41
RBCK1-209ENST00000415942 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
RBCK1-209ENST00000415942 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
RBCK1-209ENST00000415942 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.4
RBCK1-209ENST00000415942 SAMD9Q5K651 1589 aa23.81■■□□□ 1.4
RBCK1-209ENST00000415942 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
RBCK1-209ENST00000415942 NOP58Q9Y2X3 529 aaKnown RBP23.81■■□□□ 1.4
RBCK1-209ENST00000415942 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
RBCK1-209ENST00000415942 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
RBCK1-209ENST00000415942 RRP7BPQ9NSQ0 103 aa23.8■■□□□ 1.4
RBCK1-209ENST00000415942 MYOM3Q5VTT5 1437 aa23.78■■□□□ 1.4
RBCK1-209ENST00000415942 HFM1A2PYH4 1435 aa23.77■■□□□ 1.4
RBCK1-209ENST00000415942 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
RBCK1-209ENST00000415942 WDR62O43379 1518 aa23.76■■□□□ 1.39
RBCK1-209ENST00000415942 NAIPQ13075 1403 aa23.75■■□□□ 1.39
RBCK1-209ENST00000415942 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
RBCK1-209ENST00000415942 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
RBCK1-209ENST00000415942 KDM5BQ9UGL1 1544 aa23.72■■□□□ 1.39
RBCK1-209ENST00000415942 MAGI3Q5TCQ9 1506 aa23.72■■□□□ 1.39
RBCK1-209ENST00000415942 PRKCSHP14314 528 aaPredicted RBP23.72■■□□□ 1.39
RBCK1-209ENST00000415942 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
RBCK1-209ENST00000415942 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
RBCK1-209ENST00000415942 PTPN23Q9H3S7 1636 aa23.71■■□□□ 1.39
RBCK1-209ENST00000415942 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.39
RBCK1-209ENST00000415942 EIF4G2P78344 907 aaKnown RBP eCLIP23.69■■□□□ 1.38
RBCK1-209ENST00000415942 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
RBCK1-209ENST00000415942 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms