RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 PBRM1Q86U86 1689 aa33.07■■■□□ 2.88
PSMD3-202ENST00000415039 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
PSMD3-202ENST00000415039 GRIN2BQ13224 1484 aa32.97■■■□□ 2.87
PSMD3-202ENST00000415039 KANK4Q5T7N3 995 aaPredicted RBP32.93■■■□□ 2.86
PSMD3-202ENST00000415039 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.861e-7■■■■□ 21.9
PSMD3-202ENST00000415039 TIAM1Q13009 1591 aa32.93■■■□□ 2.86
PSMD3-202ENST00000415039 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
PSMD3-202ENST00000415039 CCER1Q8TC90 406 aaPredicted RBP32.92■■■□□ 2.86
PSMD3-202ENST00000415039 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
PSMD3-202ENST00000415039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.91■■■□□ 2.86
PSMD3-202ENST00000415039 SAMD9Q5K651 1589 aa32.88■■■□□ 2.85
PSMD3-202ENST00000415039 FYCO1Q9BQS8 1478 aa32.86■■■□□ 2.85
PSMD3-202ENST00000415039 FHOD3Q2V2M9 1422 aa32.85■■■□□ 2.85
PSMD3-202ENST00000415039 FMN1Q68DA7 1419 aa32.85■■■□□ 2.85
PSMD3-202ENST00000415039 PCF11O94913 1555 aaKnown RBP32.85■■■□□ 2.85
PSMD3-202ENST00000415039 CASKIN1Q8WXD9 1431 aa32.84■■■□□ 2.85
PSMD3-202ENST00000415039 RRBP1Q9P2E9 1410 aaKnown RBP32.84■■■□□ 2.85
PSMD3-202ENST00000415039 CFAP43Q8NDM7 1665 aa32.83■■■□□ 2.85
PSMD3-202ENST00000415039 ZNF608Q9ULD9 1512 aaPredicted RBP32.8■■■□□ 2.84
PSMD3-202ENST00000415039 P3H3Q8IVL6 736 aa32.79■■■□□ 2.84
PSMD3-202ENST00000415039 LRRC9Q6ZRR7 1453 aa32.78■■■□□ 2.84
PSMD3-202ENST00000415039 HNRNPUL2Q1KMD3 747 aaKnown RBP32.75■■■□□ 2.83
PSMD3-202ENST00000415039 EIF4G3O43432 1585 aaKnown RBP32.73■■■□□ 2.83
PSMD3-202ENST00000415039 IQGAP2Q13576 1575 aa32.71■■■□□ 2.83
PSMD3-202ENST00000415039 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
PSMD3-202ENST00000415039 CCNB3Q8WWL7 1395 aa32.67■■■□□ 2.82
PSMD3-202ENST00000415039 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
PSMD3-202ENST00000415039 UGGT2Q9NYU1 1516 aa32.59■■■□□ 2.81
PSMD3-202ENST00000415039 KIAA0586Q9BVV6 1533 aa32.57■■■□□ 2.8
PSMD3-202ENST00000415039 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
PSMD3-202ENST00000415039 ATP1B4Q9UN42 357 aaPredicted RBP32.55■■■□□ 2.8
PSMD3-202ENST00000415039 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
PSMD3-202ENST00000415039 PHLDB1Q86UU1 1377 aa32.47■■■□□ 2.79
PSMD3-202ENST00000415039 CCDC18Q5T9S5 1454 aa32.45■■■□□ 2.78
PSMD3-202ENST00000415039 HECW1Q76N89 1606 aa32.43■■■□□ 2.78
PSMD3-202ENST00000415039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.42■■■□□ 2.78
PSMD3-202ENST00000415039 LRRIQ1Q96JM4 1722 aa32.42■■■□□ 2.78
PSMD3-202ENST00000415039 CLSPNQ9HAW4 1339 aa32.4■■■□□ 2.78
PSMD3-202ENST00000415039 MTUS2Q5JR59 1369 aa32.38■■■□□ 2.77
PSMD3-202ENST00000415039 EHBP1L1Q8N3D4 1523 aa32.37■■■□□ 2.77
PSMD3-202ENST00000415039 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
PSMD3-202ENST00000415039 KIAA0556O60303 1618 aa32.36■■■□□ 2.77
PSMD3-202ENST00000415039 DISP1Q96F81 1524 aa32.32■■■□□ 2.77
PSMD3-202ENST00000415039 CEP170Q5SW79 1584 aa32.31■■■□□ 2.76
PSMD3-202ENST00000415039 NUP160Q12769 1436 aa32.3■■■□□ 2.76
PSMD3-202ENST00000415039 SUPT6HQ7KZ85 1726 aaKnown RBP32.29■■■□□ 2.76
PSMD3-202ENST00000415039 EPRSP07814 1512 aaKnown RBP32.26■■■□□ 2.75
PSMD3-202ENST00000415039 DHX57Q6P158 1386 aaKnown RBP32.26■■■□□ 2.75
PSMD3-202ENST00000415039 FGD6Q6ZV73 1430 aa32.24■■■□□ 2.75
PSMD3-202ENST00000415039 NCOA2Q15596 1464 aa32.23■■■□□ 2.75
PSMD3-202ENST00000415039 FAM50AQ14320 339 aaKnown RBP32.22■■■□□ 2.75
PSMD3-202ENST00000415039 ARHGEF11O15085 1522 aa32.2■■■□□ 2.75
PSMD3-202ENST00000415039 ITGAEP38570 1179 aa32.19■■■□□ 2.74
PSMD3-202ENST00000415039 MYOM3Q5VTT5 1437 aa32.18■■■□□ 2.74
PSMD3-202ENST00000415039 SETD5Q9C0A6 1442 aa32.17■■■□□ 2.74
PSMD3-202ENST00000415039 CARMIL2Q6F5E8 1435 aa32.16■■■□□ 2.74
PSMD3-202ENST00000415039 MAGI3Q5TCQ9 1506 aa32.15■■■□□ 2.74
PSMD3-202ENST00000415039 FBLN2P98095 1184 aa32.15■■■□□ 2.74
PSMD3-202ENST00000415039 RAPGEF6Q8TEU7 1601 aa32.14■■■□□ 2.74
PSMD3-202ENST00000415039 RAB3GAP2Q9H2M9 1393 aa32.12■■■□□ 2.73
PSMD3-202ENST00000415039 JPH4Q96JJ6 628 aa32.08■■■□□ 2.73
PSMD3-202ENST00000415039 CDK13Q14004 1512 aaKnown RBP32.07■■■□□ 2.73
PSMD3-202ENST00000415039 NUP153P49790 1475 aaKnown RBP32.05■■■□□ 2.72
PSMD3-202ENST00000415039 PTPN23Q9H3S7 1636 aa32.01■■■□□ 2.72
PSMD3-202ENST00000415039 TCOF1Q13428 1488 aaKnown RBP32.01■■■□□ 2.71
PSMD3-202ENST00000415039 MIA2Q96PC5 1412 aa31.99■■■□□ 2.71
PSMD3-202ENST00000415039 CDK11AQ9UQ88 783 aaPredicted RBP31.98■■■□□ 2.71
PSMD3-202ENST00000415039 CHD1O14646 1710 aa31.9■■■□□ 2.7
PSMD3-202ENST00000415039 ZNF316A6NFI3 1004 aaPredicted RBP31.9■■■□□ 2.7
PSMD3-202ENST00000415039 HFM1A2PYH4 1435 aa31.89■■■□□ 2.7
PSMD3-202ENST00000415039 PLB1Q6P1J6 1458 aa31.87■■■□□ 2.69
PSMD3-202ENST00000415039 ABCA8O94911 1581 aa31.86■■■□□ 2.69
PSMD3-202ENST00000415039 PTPRKQ15262 1439 aa31.85■■■□□ 2.69
PSMD3-202ENST00000415039 MAPKBP1O60336 1514 aa31.84■■■□□ 2.69
PSMD3-202ENST00000415039 TROQ12816 1431 aaPredicted RBP31.84■■■□□ 2.69
PSMD3-202ENST00000415039 PRG4Q92954 1404 aaPredicted RBP31.8■■■□□ 2.68
PSMD3-202ENST00000415039 AKNAQ7Z591 1439 aa31.8■■■□□ 2.68
PSMD3-202ENST00000415039 ADCY10Q96PN6 1610 aa31.8■■■□□ 2.68
PSMD3-202ENST00000415039 ARID3CA6NKF2 412 aa31.79■■■□□ 2.68
PSMD3-202ENST00000415039 SHROOM2Q13796 1616 aa31.78■■■□□ 2.68
PSMD3-202ENST00000415039 NAIPQ13075 1403 aa31.76■■■□□ 2.67
PSMD3-202ENST00000415039 DIEXFQ68CQ4 756 aaKnown RBP31.73■■■□□ 2.67
PSMD3-202ENST00000415039 ITSN2Q9NZM3 1697 aa31.72■■■□□ 2.67
PSMD3-202ENST00000415039 PTPRGP23470 1445 aa31.71■■■□□ 2.67
PSMD3-202ENST00000415039 GCC2Q8IWJ2 1684 aa31.7■■■□□ 2.67
PSMD3-202ENST00000415039 UACAQ9BZF9 1416 aa31.7■■■□□ 2.67
PSMD3-202ENST00000415039 TIMELESSQ9UNS1 1208 aa31.68■■■□□ 2.66
PSMD3-202ENST00000415039 ACIN1Q9UKV3 1341 aaKnown RBP31.67■■■□□ 2.66
PSMD3-202ENST00000415039 ATP10BO94823 1461 aa31.66■■■□□ 2.66
PSMD3-202ENST00000415039 DNMT1P26358 1616 aaKnown RBP31.64■■■□□ 2.66
PSMD3-202ENST00000415039 PLEKHD1A6NEE1 506 aa31.63■■■□□ 2.65
PSMD3-202ENST00000415039 ROCK1Q13464 1354 aa31.62■■■□□ 2.65
PSMD3-202ENST00000415039 DAPK1P53355 1430 aa31.6■■■□□ 2.65
PSMD3-202ENST00000415039 GPATCH8Q9UKJ3 1502 aaKnown RBP31.59■■■□□ 2.65
PSMD3-202ENST00000415039 KIF14Q15058 1648 aa31.59■■■□□ 2.65
PSMD3-202ENST00000415039 CLASP1Q7Z460 1538 aa31.57■■■□□ 2.64
PSMD3-202ENST00000415039 ABCC5O15440 1437 aa31.54■■■□□ 2.64
PSMD3-202ENST00000415039 CFDP1Q9UEE9 299 aaPredicted RBP31.53■■■□□ 2.64
PSMD3-202ENST00000415039 CAMSAP2Q08AD1 1489 aa31.52■■■□□ 2.64
PSMD3-202ENST00000415039 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms