RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 IGF1RP08069 1367 aa21.63■■□□□ 1.05
LIMS2-210ENST00000413578 KIF13AQ9H1H9 1805 aa21.63■■□□□ 1.05
LIMS2-210ENST00000413578 ABCC10Q5T3U5 1492 aa21.61■■□□□ 1.05
LIMS2-210ENST00000413578 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
LIMS2-210ENST00000413578 MAPKBP1O60336 1514 aa21.6■■□□□ 1.05
LIMS2-210ENST00000413578 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
LIMS2-210ENST00000413578 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
LIMS2-210ENST00000413578 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
LIMS2-210ENST00000413578 DIP2BQ9P265 1576 aa21.52■■□□□ 1.04
LIMS2-210ENST00000413578 CUL7Q14999 1698 aa21.51■■□□□ 1.03
LIMS2-210ENST00000413578 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
LIMS2-210ENST00000413578 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
LIMS2-210ENST00000413578 PTPRGP23470 1445 aa21.41■■□□□ 1.02
LIMS2-210ENST00000413578 TNIKQ9UKE5 1360 aa21.37■■□□□ 1.01
LIMS2-210ENST00000413578 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
LIMS2-210ENST00000413578 CARMIL2Q6F5E8 1435 aa21.34■■□□□ 1.01
LIMS2-210ENST00000413578 KDM6BO15054 1643 aa21.33■■□□□ 1.01
LIMS2-210ENST00000413578 IQGAP2Q13576 1575 aa21.31■■□□□ 1
LIMS2-210ENST00000413578 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
LIMS2-210ENST00000413578 DISP1Q96F81 1524 aa21.29■■□□□ 1
LIMS2-210ENST00000413578 ASXL2Q76L83 1435 aa21.29■■□□□ 1
LIMS2-210ENST00000413578 KDM4FA0A1W2PPD8 638 aa21.28■■□□□ 1
LIMS2-210ENST00000413578 PLB1Q6P1J6 1458 aa21.27■■□□□ 1
LIMS2-210ENST00000413578 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
LIMS2-210ENST00000413578 GLI2P10070 1586 aa21.26■□□□□ 0.99
LIMS2-210ENST00000413578 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
LIMS2-210ENST00000413578 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
LIMS2-210ENST00000413578 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
LIMS2-210ENST00000413578 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
LIMS2-210ENST00000413578 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
LIMS2-210ENST00000413578 PPRC1Q5VV67 1664 aaKnown RBP21.21■□□□□ 0.99
LIMS2-210ENST00000413578 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
LIMS2-210ENST00000413578 KIAA0556O60303 1618 aa21.15■□□□□ 0.98
LIMS2-210ENST00000413578 COL17A1Q9UMD9 1497 aaPredicted RBP21.14■□□□□ 0.98
LIMS2-210ENST00000413578 MAP3K4Q9Y6R4 1608 aa21.1■□□□□ 0.97
LIMS2-210ENST00000413578 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
LIMS2-210ENST00000413578 TEX14Q8IWB6 1497 aa21.05■□□□□ 0.96
LIMS2-210ENST00000413578 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
LIMS2-210ENST00000413578 ADGRL1O94910 1474 aa21.03■□□□□ 0.96
LIMS2-210ENST00000413578 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
LIMS2-210ENST00000413578 ABCA8O94911 1581 aa20.99■□□□□ 0.95
LIMS2-210ENST00000413578 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
LIMS2-210ENST00000413578 MAGI3Q5TCQ9 1506 aa20.96■□□□□ 0.95
LIMS2-210ENST00000413578 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
LIMS2-210ENST00000413578 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
LIMS2-210ENST00000413578 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
LIMS2-210ENST00000413578 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
LIMS2-210ENST00000413578 ATP10BO94823 1461 aa20.81■□□□□ 0.92
LIMS2-210ENST00000413578 ARAP3Q8WWN8 1544 aa20.79■□□□□ 0.92
LIMS2-210ENST00000413578 ILDR1Q86SU0 546 aaPredicted RBP20.79■□□□□ 0.92
LIMS2-210ENST00000413578 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
LIMS2-210ENST00000413578 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
LIMS2-210ENST00000413578 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
LIMS2-210ENST00000413578 ARID3CA6NKF2 412 aa20.73■□□□□ 0.91
LIMS2-210ENST00000413578 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
LIMS2-210ENST00000413578 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
LIMS2-210ENST00000413578 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
LIMS2-210ENST00000413578 KIF21BO75037 1637 aa20.68■□□□□ 0.9
LIMS2-210ENST00000413578 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-210ENST00000413578 NEO1Q92859 1461 aa20.67■□□□□ 0.9
LIMS2-210ENST00000413578 RAPGEF6Q8TEU7 1601 aa20.67■□□□□ 0.9
LIMS2-210ENST00000413578 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
LIMS2-210ENST00000413578 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
LIMS2-210ENST00000413578 EEA1Q15075 1411 aa20.61■□□□□ 0.89
LIMS2-210ENST00000413578 FRMPD1Q5SYB0 1578 aa20.6■□□□□ 0.89
LIMS2-210ENST00000413578 FHOD3Q2V2M9 1422 aa20.6■□□□□ 0.89
LIMS2-210ENST00000413578 ADAMTSL3P82987 1691 aa20.59■□□□□ 0.89
LIMS2-210ENST00000413578 PTPRMP28827 1452 aa20.57■□□□□ 0.88
LIMS2-210ENST00000413578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
LIMS2-210ENST00000413578 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
LIMS2-210ENST00000413578 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
LIMS2-210ENST00000413578 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
LIMS2-210ENST00000413578 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-210ENST00000413578 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
LIMS2-210ENST00000413578 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
LIMS2-210ENST00000413578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.87
LIMS2-210ENST00000413578 ARHGEF40Q8TER5 1519 aa20.48■□□□□ 0.87
LIMS2-210ENST00000413578 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
LIMS2-210ENST00000413578 FANCAO15360 1455 aa20.47■□□□□ 0.87
LIMS2-210ENST00000413578 MADDQ8WXG6 1647 aa20.45■□□□□ 0.87
LIMS2-210ENST00000413578 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
LIMS2-210ENST00000413578 ZMYM4Q5VZL5 1548 aa20.43■□□□□ 0.86
LIMS2-210ENST00000413578 TTC37Q6PGP7 1564 aa20.43■□□□□ 0.86
LIMS2-210ENST00000413578 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
LIMS2-210ENST00000413578 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
LIMS2-210ENST00000413578 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
LIMS2-210ENST00000413578 CFAP74Q9C0B2 1584 aa20.42■□□□□ 0.86
LIMS2-210ENST00000413578 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
LIMS2-210ENST00000413578 YEATS2Q9ULM3 1422 aa20.39■□□□□ 0.85
LIMS2-210ENST00000413578 FBXO41Q8TF61 875 aa20.39■□□□□ 0.85
LIMS2-210ENST00000413578 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
LIMS2-210ENST00000413578 PLCH2O75038 1416 aa20.37■□□□□ 0.85
LIMS2-210ENST00000413578 ZFYVE16Q7Z3T8 1539 aa20.36■□□□□ 0.85
LIMS2-210ENST00000413578 SIGLEC1Q9BZZ2 1709 aa20.35■□□□□ 0.85
LIMS2-210ENST00000413578 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
LIMS2-210ENST00000413578 RIMS1Q86UR5 1692 aaKnown RBP20.33■□□□□ 0.85
LIMS2-210ENST00000413578 HECW1Q76N89 1606 aa20.33■□□□□ 0.84
LIMS2-210ENST00000413578 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
LIMS2-210ENST00000413578 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
LIMS2-210ENST00000413578 FMN1Q68DA7 1419 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms