RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
RPE-204ENST00000411934 RAPGEF2Q9Y4G8 1499 aa13.81□□□□□ -0.2
RPE-204ENST00000411934 ARHGEF11O15085 1522 aa13.81□□□□□ -0.2
RPE-204ENST00000411934 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
RPE-204ENST00000411934 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
RPE-204ENST00000411934 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
RPE-204ENST00000411934 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
RPE-204ENST00000411934 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
RPE-204ENST00000411934 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
RPE-204ENST00000411934 IQGAP2Q13576 1575 aa13.72□□□□□ -0.21
RPE-204ENST00000411934 KIF21BO75037 1637 aa13.72□□□□□ -0.21
RPE-204ENST00000411934 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
RPE-204ENST00000411934 CTTNBP2Q8WZ74 1663 aa13.71□□□□□ -0.21
RPE-204ENST00000411934 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
RPE-204ENST00000411934 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
RPE-204ENST00000411934 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
RPE-204ENST00000411934 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
RPE-204ENST00000411934 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
RPE-204ENST00000411934 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
RPE-204ENST00000411934 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
RPE-204ENST00000411934 KIAA0556O60303 1618 aa13.59□□□□□ -0.23
RPE-204ENST00000411934 DISP1Q96F81 1524 aa13.58□□□□□ -0.24
RPE-204ENST00000411934 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
RPE-204ENST00000411934 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
RPE-204ENST00000411934 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
RPE-204ENST00000411934 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
RPE-204ENST00000411934 EFCAB5A4FU69 1503 aa13.53□□□□□ -0.24
RPE-204ENST00000411934 PTPRGP23470 1445 aa13.51□□□□□ -0.25
RPE-204ENST00000411934 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
RPE-204ENST00000411934 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
RPE-204ENST00000411934 ABCC2Q92887 1545 aa13.47□□□□□ -0.25
RPE-204ENST00000411934 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
RPE-204ENST00000411934 MAPKBP1O60336 1514 aa13.45□□□□□ -0.26
RPE-204ENST00000411934 ABCA8O94911 1581 aa13.43□□□□□ -0.26
RPE-204ENST00000411934 UBTFP17480 764 aaKnown RBP13.43□□□□□ -0.26
RPE-204ENST00000411934 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
RPE-204ENST00000411934 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
RPE-204ENST00000411934 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
RPE-204ENST00000411934 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
RPE-204ENST00000411934 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPE-204ENST00000411934 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
RPE-204ENST00000411934 FHOD3Q2V2M9 1422 aa13.36□□□□□ -0.27
RPE-204ENST00000411934 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
RPE-204ENST00000411934 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
RPE-204ENST00000411934 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
RPE-204ENST00000411934 CLIP1P30622 1438 aa13.32□□□□□ -0.28
RPE-204ENST00000411934 ADRA2BP18089 450 aa13.32□□□□□ -0.28
RPE-204ENST00000411934 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
RPE-204ENST00000411934 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
RPE-204ENST00000411934 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
RPE-204ENST00000411934 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
RPE-204ENST00000411934 GLI2P10070 1586 aa13.29□□□□□ -0.28
RPE-204ENST00000411934 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
RPE-204ENST00000411934 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
RPE-204ENST00000411934 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
RPE-204ENST00000411934 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
RPE-204ENST00000411934 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
RPE-204ENST00000411934 ATP10BO94823 1461 aa13.27□□□□□ -0.29
RPE-204ENST00000411934 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
RPE-204ENST00000411934 FYCO1Q9BQS8 1478 aa13.25□□□□□ -0.29
RPE-204ENST00000411934 CASKIN1Q8WXD9 1431 aa13.25□□□□□ -0.29
RPE-204ENST00000411934 RANGAP1P46060 587 aaPredicted RBP13.25□□□□□ -0.29
RPE-204ENST00000411934 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
RPE-204ENST00000411934 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
RPE-204ENST00000411934 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
RPE-204ENST00000411934 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
RPE-204ENST00000411934 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
RPE-204ENST00000411934 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.3
RPE-204ENST00000411934 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.3
RPE-204ENST00000411934 ABCA9Q8IUA7 1624 aa13.18□□□□□ -0.3
RPE-204ENST00000411934 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
RPE-204ENST00000411934 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
RPE-204ENST00000411934 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
RPE-204ENST00000411934 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
RPE-204ENST00000411934 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
RPE-204ENST00000411934 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
RPE-204ENST00000411934 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
RPE-204ENST00000411934 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
RPE-204ENST00000411934 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
RPE-204ENST00000411934 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
RPE-204ENST00000411934 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
RPE-204ENST00000411934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
RPE-204ENST00000411934 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
RPE-204ENST00000411934 KIF14Q15058 1648 aa13.12□□□□□ -0.31
RPE-204ENST00000411934 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
RPE-204ENST00000411934 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
RPE-204ENST00000411934 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
RPE-204ENST00000411934 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
RPE-204ENST00000411934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPE-204ENST00000411934 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
RPE-204ENST00000411934 CFAP74Q9C0B2 1584 aa13.09□□□□□ -0.31
RPE-204ENST00000411934 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
RPE-204ENST00000411934 TSPOAP1O95153 1857 aa13.08□□□□□ -0.32
RPE-204ENST00000411934 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
RPE-204ENST00000411934 NEO1Q92859 1461 aa13.07□□□□□ -0.32
RPE-204ENST00000411934 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
RPE-204ENST00000411934 KDM6BO15054 1643 aa13.06□□□□□ -0.32
RPE-204ENST00000411934 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
RPE-204ENST00000411934 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
RPE-204ENST00000411934 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms