RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 CARMIL1Q5VZK9 1371 aa30.79■■■□□ 2.52
ITM2C-204ENST00000409704 KIAA0586Q9BVV6 1533 aa30.79■■■□□ 2.52
ITM2C-204ENST00000409704 JPH4Q96JJ6 628 aa30.73■■■□□ 2.51
ITM2C-204ENST00000409704 IQGAP2Q13576 1575 aa30.65■■■□□ 2.5
ITM2C-204ENST00000409704 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
ITM2C-204ENST00000409704 TRHP20396 242 aaPredicted RBP30.62■■■□□ 2.49
ITM2C-204ENST00000409704 CTTNBP2Q8WZ74 1663 aa30.52■■■□□ 2.48
ITM2C-204ENST00000409704 ADCY10Q96PN6 1610 aa30.51■■■□□ 2.48
ITM2C-204ENST00000409704 PRXQ9BXM0 1461 aa30.45■■■□□ 2.47
ITM2C-204ENST00000409704 UGGT2Q9NYU1 1516 aa30.44■■■□□ 2.46
ITM2C-204ENST00000409704 CARMIL2Q6F5E8 1435 aa30.44■■■□□ 2.46
ITM2C-204ENST00000409704 DISP1Q96F81 1524 aa30.42■■■□□ 2.46
ITM2C-204ENST00000409704 KIAA0556O60303 1618 aa30.39■■■□□ 2.46
ITM2C-204ENST00000409704 KIF13AQ9H1H9 1805 aa30.38■■■□□ 2.45
ITM2C-204ENST00000409704 TNIKQ9UKE5 1360 aa30.37■■■□□ 2.45
ITM2C-204ENST00000409704 MAPKBP1O60336 1514 aa30.37■■■□□ 2.45
ITM2C-204ENST00000409704 PTPRGP23470 1445 aa30.35■■■□□ 2.45
ITM2C-204ENST00000409704 EEA1Q15075 1411 aa30.3■■■□□ 2.44
ITM2C-204ENST00000409704 DIP2BQ9P265 1576 aa30.25■■■□□ 2.43
ITM2C-204ENST00000409704 NPM1P06748 294 aaKnown RBP eCLIP30.22■■■□□ 2.43
ITM2C-204ENST00000409704 UHRF1BP1LA0JNW5 1464 aa30.22■■■□□ 2.43
ITM2C-204ENST00000409704 ABCC10Q5T3U5 1492 aa30.22■■■□□ 2.43
ITM2C-204ENST00000409704 ABCC2Q92887 1545 aa30.22■■■□□ 2.43
ITM2C-204ENST00000409704 TTBK1Q5TCY1 1321 aaPredicted RBP30.21■■■□□ 2.43
ITM2C-204ENST00000409704 GOLGA3Q08378 1498 aa30.19■■■□□ 2.42
ITM2C-204ENST00000409704 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
ITM2C-204ENST00000409704 UACAQ9BZF9 1416 aa30.18■■■□□ 2.42
ITM2C-204ENST00000409704 KIF21BO75037 1637 aa30.1■■■□□ 2.41
ITM2C-204ENST00000409704 ZCCHC11Q5TAX3 1644 aaKnown RBP30.09■■■□□ 2.41
ITM2C-204ENST00000409704 KDM5BQ9UGL1 1544 aa30.08■■■□□ 2.41
ITM2C-204ENST00000409704 SAMD9Q5K651 1589 aa30.07■■■□□ 2.4
ITM2C-204ENST00000409704 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
ITM2C-204ENST00000409704 ABCA8O94911 1581 aa30.04■■■□□ 2.4
ITM2C-204ENST00000409704 FAM69CQ0P6D2 419 aa30.04■■■□□ 2.4
ITM2C-204ENST00000409704 ASXL2Q76L83 1435 aa30.04■■■□□ 2.4
ITM2C-204ENST00000409704 PLB1Q6P1J6 1458 aa30.03■■■□□ 2.4
ITM2C-204ENST00000409704 FAM9AQ8IZU1 332 aaPredicted RBP29.99■■■□□ 2.39
ITM2C-204ENST00000409704 GLI2P10070 1586 aa29.97■■■□□ 2.39
ITM2C-204ENST00000409704 TSPOAP1O95153 1857 aa29.97■■■□□ 2.39
ITM2C-204ENST00000409704 PPRC1Q5VV67 1664 aaKnown RBP29.89■■■□□ 2.38
ITM2C-204ENST00000409704 EPRSP07814 1512 aaKnown RBP29.89■■■□□ 2.38
ITM2C-204ENST00000409704 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
ITM2C-204ENST00000409704 MAP3K4Q9Y6R4 1608 aa29.86■■■□□ 2.37
ITM2C-204ENST00000409704 KDM6BO15054 1643 aa29.84■■■□□ 2.37
ITM2C-204ENST00000409704 RAPGEF6Q8TEU7 1601 aa29.83■■■□□ 2.37
ITM2C-204ENST00000409704 EFCAB5A4FU69 1503 aa29.83■■■□□ 2.37
ITM2C-204ENST00000409704 P3H3Q8IVL6 736 aa29.82■■■□□ 2.36
ITM2C-204ENST00000409704 FHOD3Q2V2M9 1422 aa29.78■■■□□ 2.36
ITM2C-204ENST00000409704 CFAP43Q8NDM7 1665 aa29.72■■■□□ 2.35
ITM2C-204ENST00000409704 ATP10BO94823 1461 aa29.7■■■□□ 2.35
ITM2C-204ENST00000409704 RANGAP1P46060 587 aaPredicted RBP29.7■■■□□ 2.35
ITM2C-204ENST00000409704 NUP153P49790 1475 aaKnown RBP29.67■■■□□ 2.34
ITM2C-204ENST00000409704 TEX14Q8IWB6 1497 aa29.67■■■□□ 2.34
ITM2C-204ENST00000409704 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
ITM2C-204ENST00000409704 ARID3CA6NKF2 412 aa29.61■■■□□ 2.33
ITM2C-204ENST00000409704 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
ITM2C-204ENST00000409704 MAGI3Q5TCQ9 1506 aa29.58■■■□□ 2.33
ITM2C-204ENST00000409704 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
ITM2C-204ENST00000409704 ABCA9Q8IUA7 1624 aa29.56■■■□□ 2.32
ITM2C-204ENST00000409704 CD109Q6YHK3 1445 aa29.55■■■□□ 2.32
ITM2C-204ENST00000409704 KCNH8Q96L42 1107 aa29.53■■■□□ 2.32
ITM2C-204ENST00000409704 COL17A1Q9UMD9 1497 aaPredicted RBP29.51■■■□□ 2.31
ITM2C-204ENST00000409704 HECW1Q76N89 1606 aa29.49■■■□□ 2.31
ITM2C-204ENST00000409704 FMN1Q68DA7 1419 aa29.47■■■□□ 2.31
ITM2C-204ENST00000409704 CDK13Q14004 1512 aaKnown RBP29.45■■■□□ 2.3
ITM2C-204ENST00000409704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.42■■■□□ 2.3
ITM2C-204ENST00000409704 HNRNPUL2Q1KMD3 747 aaKnown RBP29.42■■■□□ 2.3
ITM2C-204ENST00000409704 LRRIQ1Q96JM4 1722 aa29.35■■■□□ 2.29
ITM2C-204ENST00000409704 PCF11O94913 1555 aaKnown RBP29.34■■■□□ 2.29
ITM2C-204ENST00000409704 TTC37Q6PGP7 1564 aa29.34■■■□□ 2.29
ITM2C-204ENST00000409704 AEBP2Q6ZN18 517 aaPredicted RBP29.33■■■□□ 2.29
ITM2C-204ENST00000409704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.33■■■□□ 2.29
ITM2C-204ENST00000409704 ARAP3Q8WWN8 1544 aa29.32■■■□□ 2.28
ITM2C-204ENST00000409704 NEO1Q92859 1461 aa29.3■■■□□ 2.28
ITM2C-204ENST00000409704 PLEKHD1A6NEE1 506 aa29.29■■■□□ 2.28
ITM2C-204ENST00000409704 CFAP74Q9C0B2 1584 aa29.27■■■□□ 2.28
ITM2C-204ENST00000409704 PHLDB1Q86UU1 1377 aa29.25■■■□□ 2.27
ITM2C-204ENST00000409704 CLIP1P30622 1438 aa29.23■■■□□ 2.27
ITM2C-204ENST00000409704 FRMPD1Q5SYB0 1578 aa29.22■■■□□ 2.27
ITM2C-204ENST00000409704 CASKIN1Q8WXD9 1431 aa29.21■■■□□ 2.27
ITM2C-204ENST00000409704 KIF14Q15058 1648 aa29.2■■■□□ 2.27
ITM2C-204ENST00000409704 ATP1B4Q9UN42 357 aaPredicted RBP29.2■■■□□ 2.26
ITM2C-204ENST00000409704 CCDC18Q5T9S5 1454 aa29.18■■■□□ 2.26
ITM2C-204ENST00000409704 FYCO1Q9BQS8 1478 aa29.18■■■□□ 2.26
ITM2C-204ENST00000409704 ADGRL1O94910 1474 aa29.17■■■□□ 2.26
ITM2C-204ENST00000409704 MYO5CQ9NQX4 1742 aa29.17■■■□□ 2.26
ITM2C-204ENST00000409704 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
ITM2C-204ENST00000409704 FANCAO15360 1455 aa29.17■■■□□ 2.26
ITM2C-204ENST00000409704 TROQ12816 1431 aaPredicted RBP29.15■■■□□ 2.26
ITM2C-204ENST00000409704 RICTORQ6R327 1708 aa29.14■■■□□ 2.26
ITM2C-204ENST00000409704 CDK11AQ9UQ88 783 aaPredicted RBP29.1■■■□□ 2.25
ITM2C-204ENST00000409704 AKNAQ7Z591 1439 aa29.1■■■□□ 2.25
ITM2C-204ENST00000409704 PLCH2O75038 1416 aa29.07■■■□□ 2.24
ITM2C-204ENST00000409704 DENND4BO75064 1496 aaPredicted RBP29.06■■■□□ 2.24
ITM2C-204ENST00000409704 ARHGEF40Q8TER5 1519 aa29.05■■■□□ 2.24
ITM2C-204ENST00000409704 CEP162Q5TB80 1403 aa29.04■■■□□ 2.24
ITM2C-204ENST00000409704 ZMYM4Q5VZL5 1548 aa29.04■■■□□ 2.24
ITM2C-204ENST00000409704 RAPGEF3O95398 923 aa29.03■■■□□ 2.24
ITM2C-204ENST00000409704 PREX2Q70Z35 1606 aa29.01■■■□□ 2.23
ITM2C-204ENST00000409704 CDC42BPBQ9Y5S2 1711 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms