RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 CNGB1Q14028 1251 aaPredicted RBP14.18□□□□□ -0.14
POLR1A-203ENST00000409681 CCNB3Q8WWL7 1395 aa14.17□□□□□ -0.14
POLR1A-203ENST00000409681 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
POLR1A-203ENST00000409681 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
POLR1A-203ENST00000409681 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
POLR1A-203ENST00000409681 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
POLR1A-203ENST00000409681 HRCP23327 699 aa14.14□□□□□ -0.15
POLR1A-203ENST00000409681 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
POLR1A-203ENST00000409681 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
POLR1A-203ENST00000409681 CFTRP13569 1480 aa14.12□□□□□ -0.15
POLR1A-203ENST00000409681 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
POLR1A-203ENST00000409681 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
POLR1A-203ENST00000409681 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
POLR1A-203ENST00000409681 NEFMP07197 916 aa14.09□□□□□ -0.15
POLR1A-203ENST00000409681 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
POLR1A-203ENST00000409681 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
POLR1A-203ENST00000409681 YTHDC1Q96MU7 727 aaKnown RBP14.07□□□□□ -0.16
POLR1A-203ENST00000409681 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
POLR1A-203ENST00000409681 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
POLR1A-203ENST00000409681 PTPRGP23470 1445 aa14.04□□□□□ -0.16
POLR1A-203ENST00000409681 KANK1Q14678 1352 aa14.04□□□□□ -0.16
POLR1A-203ENST00000409681 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
POLR1A-203ENST00000409681 NESP48681 1621 aa14.03□□□□□ -0.16
POLR1A-203ENST00000409681 GRIN2BQ13224 1484 aa14.02□□□□□ -0.16
POLR1A-203ENST00000409681 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
POLR1A-203ENST00000409681 MYT1Q01538 1121 aa14.01□□□□□ -0.17
POLR1A-203ENST00000409681 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
POLR1A-203ENST00000409681 ANP32CO43423 234 aa14□□□□□ -0.17
POLR1A-203ENST00000409681 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
POLR1A-203ENST00000409681 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.176e-7■■■■■ 43.5
POLR1A-203ENST00000409681 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
POLR1A-203ENST00000409681 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
POLR1A-203ENST00000409681 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
POLR1A-203ENST00000409681 IGF1RP08069 1367 aa13.94□□□□□ -0.18
POLR1A-203ENST00000409681 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
POLR1A-203ENST00000409681 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
POLR1A-203ENST00000409681 MLECQ14165 292 aa13.93□□□□□ -0.18
POLR1A-203ENST00000409681 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
POLR1A-203ENST00000409681 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
POLR1A-203ENST00000409681 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
POLR1A-203ENST00000409681 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.18
POLR1A-203ENST00000409681 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
POLR1A-203ENST00000409681 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
POLR1A-203ENST00000409681 GGT6Q6P531 493 aa13.87□□□□□ -0.19
POLR1A-203ENST00000409681 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
POLR1A-203ENST00000409681 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
POLR1A-203ENST00000409681 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
POLR1A-203ENST00000409681 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
POLR1A-203ENST00000409681 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
POLR1A-203ENST00000409681 ANKRD30AQ9BXX3 1397 aa13.84□□□□□ -0.19
POLR1A-203ENST00000409681 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
POLR1A-203ENST00000409681 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
POLR1A-203ENST00000409681 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
POLR1A-203ENST00000409681 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
POLR1A-203ENST00000409681 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
POLR1A-203ENST00000409681 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
POLR1A-203ENST00000409681 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
POLR1A-203ENST00000409681 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
POLR1A-203ENST00000409681 POGKQ9P215 609 aa13.77□□□□□ -0.2
POLR1A-203ENST00000409681 RUSC2Q8N2Y8 1516 aa13.77□□□□□ -0.2
POLR1A-203ENST00000409681 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.218e-7■■■■■ 28.7
POLR1A-203ENST00000409681 TOP2BQ02880 1626 aa13.77□□□□□ -0.21
POLR1A-203ENST00000409681 KIF3BO15066 747 aa13.76□□□□□ -0.21
POLR1A-203ENST00000409681 CUX1P39880 1505 aa13.75□□□□□ -0.21
POLR1A-203ENST00000409681 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
POLR1A-203ENST00000409681 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
POLR1A-203ENST00000409681 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
POLR1A-203ENST00000409681 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
POLR1A-203ENST00000409681 WASHC2CQ9Y4E1 1318 aa13.73□□□□□ -0.21
POLR1A-203ENST00000409681 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
POLR1A-203ENST00000409681 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
POLR1A-203ENST00000409681 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
POLR1A-203ENST00000409681 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
POLR1A-203ENST00000409681 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
POLR1A-203ENST00000409681 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.22
POLR1A-203ENST00000409681 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
POLR1A-203ENST00000409681 CARD11Q9BXL7 1154 aa13.7□□□□□ -0.22
POLR1A-203ENST00000409681 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
POLR1A-203ENST00000409681 NUP155O75694 1391 aa13.69□□□□□ -0.22
POLR1A-203ENST00000409681 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
POLR1A-203ENST00000409681 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
POLR1A-203ENST00000409681 PKD2Q13563 968 aa13.68□□□□□ -0.22
POLR1A-203ENST00000409681 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
POLR1A-203ENST00000409681 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
POLR1A-203ENST00000409681 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
POLR1A-203ENST00000409681 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
POLR1A-203ENST00000409681 TIMELESSQ9UNS1 1208 aa13.65□□□□□ -0.22
POLR1A-203ENST00000409681 WDR43Q15061 677 aaKnown RBP eCLIP13.65□□□□□ -0.22
POLR1A-203ENST00000409681 DCAF11Q8TEB1 546 aa13.63□□□□□ -0.23
POLR1A-203ENST00000409681 EFCAB5A4FU69 1503 aa13.63□□□□□ -0.23
POLR1A-203ENST00000409681 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
POLR1A-203ENST00000409681 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
POLR1A-203ENST00000409681 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
POLR1A-203ENST00000409681 NPM2Q86SE8 214 aaKnown RBP13.61□□□□□ -0.23
POLR1A-203ENST00000409681 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
POLR1A-203ENST00000409681 KIF21BO75037 1637 aa13.61□□□□□ -0.23
POLR1A-203ENST00000409681 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
POLR1A-203ENST00000409681 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
POLR1A-203ENST00000409681 KNSTRNQ9Y448 316 aa13.6□□□□□ -0.23
POLR1A-203ENST00000409681 MYOM3Q5VTT5 1437 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms