RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 KIAA0586Q9BVV6 1533 aa30.18■■■□□ 2.42
PDLIM2-206ENST00000409141 ERCC6L2Q5T890 1561 aa30.17■■■□□ 2.42
PDLIM2-206ENST00000409141 PRG4Q92954 1404 aaPredicted RBP30.16■■■□□ 2.42
PDLIM2-206ENST00000409141 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
PDLIM2-206ENST00000409141 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
PDLIM2-206ENST00000409141 CSRNP3Q8WYN3 585 aa30.05■■■□□ 2.4
PDLIM2-206ENST00000409141 PRXQ9BXM0 1461 aa30.01■■■□□ 2.39
PDLIM2-206ENST00000409141 EEA1Q15075 1411 aa29.98■■■□□ 2.39
PDLIM2-206ENST00000409141 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
PDLIM2-206ENST00000409141 IQGAP2Q13576 1575 aa29.96■■■□□ 2.39
PDLIM2-206ENST00000409141 CARMIL2Q6F5E8 1435 aa29.89■■■□□ 2.38
PDLIM2-206ENST00000409141 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
PDLIM2-206ENST00000409141 TTBK1Q5TCY1 1321 aaPredicted RBP29.83■■■□□ 2.37
PDLIM2-206ENST00000409141 PTPRGP23470 1445 aa29.81■■■□□ 2.36
PDLIM2-206ENST00000409141 TNIKQ9UKE5 1360 aa29.8■■■□□ 2.36
PDLIM2-206ENST00000409141 UGGT2Q9NYU1 1516 aa29.8■■■□□ 2.36
PDLIM2-206ENST00000409141 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
PDLIM2-206ENST00000409141 DISP1Q96F81 1524 aa29.78■■■□□ 2.36
PDLIM2-206ENST00000409141 NPM1P06748 294 aaKnown RBP eCLIP29.72■■■□□ 2.35
PDLIM2-206ENST00000409141 KIAA0556O60303 1618 aa29.67■■■□□ 2.34
PDLIM2-206ENST00000409141 GOLGA3Q08378 1498 aa29.66■■■□□ 2.34
PDLIM2-206ENST00000409141 ADCY10Q96PN6 1610 aa29.65■■■□□ 2.34
PDLIM2-206ENST00000409141 KIF21BO75037 1637 aa29.63■■■□□ 2.33
PDLIM2-206ENST00000409141 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
PDLIM2-206ENST00000409141 UACAQ9BZF9 1416 aa29.58■■■□□ 2.33
PDLIM2-206ENST00000409141 RANGAP1P46060 587 aaPredicted RBP29.55■■■□□ 2.32
PDLIM2-206ENST00000409141 P3H3Q8IVL6 736 aa29.55■■■□□ 2.32
PDLIM2-206ENST00000409141 UBTFP17480 764 aaKnown RBP29.55■■■□□ 2.32
PDLIM2-206ENST00000409141 UHRF1BP1LA0JNW5 1464 aa29.51■■■□□ 2.32
PDLIM2-206ENST00000409141 ABCC2Q92887 1545 aa29.5■■■□□ 2.31
PDLIM2-206ENST00000409141 MAPKBP1O60336 1514 aa29.48■■■□□ 2.31
PDLIM2-206ENST00000409141 PLB1Q6P1J6 1458 aa29.43■■■□□ 2.3
PDLIM2-206ENST00000409141 SAMD9Q5K651 1589 aa29.42■■■□□ 2.3
PDLIM2-206ENST00000409141 FAM69CQ0P6D2 419 aa29.42■■■□□ 2.3
PDLIM2-206ENST00000409141 ABCC10Q5T3U5 1492 aa29.39■■■□□ 2.3
PDLIM2-206ENST00000409141 KDM5BQ9UGL1 1544 aa29.38■■■□□ 2.29
PDLIM2-206ENST00000409141 ABCA8O94911 1581 aa29.35■■■□□ 2.29
PDLIM2-206ENST00000409141 ASXL2Q76L83 1435 aa29.34■■■□□ 2.29
PDLIM2-206ENST00000409141 KIF13AQ9H1H9 1805 aa29.33■■■□□ 2.29
PDLIM2-206ENST00000409141 FHOD3Q2V2M9 1422 aa29.32■■■□□ 2.28
PDLIM2-206ENST00000409141 DIP2BQ9P265 1576 aa29.3■■■□□ 2.28
PDLIM2-206ENST00000409141 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
PDLIM2-206ENST00000409141 ZCCHC11Q5TAX3 1644 aaKnown RBP29.29■■■□□ 2.28
PDLIM2-206ENST00000409141 ARID3CA6NKF2 412 aa29.25■■■□□ 2.27
PDLIM2-206ENST00000409141 RAPGEF6Q8TEU7 1601 aa29.18■■■□□ 2.26
PDLIM2-206ENST00000409141 ATP10BO94823 1461 aa29.16■■■□□ 2.26
PDLIM2-206ENST00000409141 ARHGAP35Q9NRY4 1499 aa29.16■■■□□ 2.26
PDLIM2-206ENST00000409141 WDR7Q9Y4E6 1490 aa29.16■■■□□ 2.26
PDLIM2-206ENST00000409141 EPRSP07814 1512 aaKnown RBP29.15■■■□□ 2.26
PDLIM2-206ENST00000409141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
PDLIM2-206ENST00000409141 HNRNPUL2Q1KMD3 747 aaKnown RBP29.14■■■□□ 2.26
PDLIM2-206ENST00000409141 KCNH8Q96L42 1107 aa29.14■■■□□ 2.26
PDLIM2-206ENST00000409141 GLI2P10070 1586 aa29.13■■■□□ 2.25
PDLIM2-206ENST00000409141 NUP153P49790 1475 aaKnown RBP29.1■■■□□ 2.25
PDLIM2-206ENST00000409141 TSPOAP1O95153 1857 aa29.08■■■□□ 2.25
PDLIM2-206ENST00000409141 FMN1Q68DA7 1419 aa29.07■■■□□ 2.24
PDLIM2-206ENST00000409141 ATP1B4Q9UN42 357 aaPredicted RBP29.04■■■□□ 2.24
PDLIM2-206ENST00000409141 CLIP1P30622 1438 aa29■■■□□ 2.23
PDLIM2-206ENST00000409141 PLEKHD1A6NEE1 506 aa28.98■■■□□ 2.23
PDLIM2-206ENST00000409141 MAP3K4Q9Y6R4 1608 aa28.97■■■□□ 2.23
PDLIM2-206ENST00000409141 CD109Q6YHK3 1445 aa28.94■■■□□ 2.22
PDLIM2-206ENST00000409141 LOC105371045A0A1W2PR82 267 aa28.94■■■□□ 2.22
PDLIM2-206ENST00000409141 PPRC1Q5VV67 1664 aaKnown RBP28.92■■■□□ 2.22
PDLIM2-206ENST00000409141 TEX14Q8IWB6 1497 aa28.91■■■□□ 2.22
PDLIM2-206ENST00000409141 HECW1Q76N89 1606 aa28.91■■■□□ 2.22
PDLIM2-206ENST00000409141 CDK13Q14004 1512 aaKnown RBP28.89■■■□□ 2.22
PDLIM2-206ENST00000409141 CFAP43Q8NDM7 1665 aa28.89■■■□□ 2.21
PDLIM2-206ENST00000409141 KDM6BO15054 1643 aa28.88■■■□□ 2.21
PDLIM2-206ENST00000409141 MAGI3Q5TCQ9 1506 aa28.84■■■□□ 2.21
PDLIM2-206ENST00000409141 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
PDLIM2-206ENST00000409141 CASKIN1Q8WXD9 1431 aa28.83■■■□□ 2.21
PDLIM2-206ENST00000409141 CEP162Q5TB80 1403 aa28.83■■■□□ 2.2
PDLIM2-206ENST00000409141 ABCA9Q8IUA7 1624 aa28.81■■■□□ 2.2
PDLIM2-206ENST00000409141 PCF11O94913 1555 aaKnown RBP28.77■■■□□ 2.2
PDLIM2-206ENST00000409141 COL17A1Q9UMD9 1497 aaPredicted RBP28.74■■■□□ 2.19
PDLIM2-206ENST00000409141 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
PDLIM2-206ENST00000409141 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
PDLIM2-206ENST00000409141 LRRIQ1Q96JM4 1722 aa28.7■■■□□ 2.18
PDLIM2-206ENST00000409141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.69■■■□□ 2.18
PDLIM2-206ENST00000409141 TROQ12816 1431 aaPredicted RBP28.67■■■□□ 2.18
PDLIM2-206ENST00000409141 PHLDB1Q86UU1 1377 aa28.66■■■□□ 2.18
PDLIM2-206ENST00000409141 TTC37Q6PGP7 1564 aa28.63■■■□□ 2.17
PDLIM2-206ENST00000409141 NEO1Q92859 1461 aa28.62■■■□□ 2.17
PDLIM2-206ENST00000409141 ARAP3Q8WWN8 1544 aa28.6■■■□□ 2.17
PDLIM2-206ENST00000409141 KIF14Q15058 1648 aa28.57■■■□□ 2.16
PDLIM2-206ENST00000409141 FANCAO15360 1455 aa28.57■■■□□ 2.16
PDLIM2-206ENST00000409141 PLCH2O75038 1416 aa28.56■■■□□ 2.16
PDLIM2-206ENST00000409141 RAPGEF3O95398 923 aa28.53■■■□□ 2.16
PDLIM2-206ENST00000409141 AKNAQ7Z591 1439 aa28.53■■■□□ 2.16
PDLIM2-206ENST00000409141 EFCAB2Q5VUJ9 269 aa28.51■■■□□ 2.15
PDLIM2-206ENST00000409141 CFAP74Q9C0B2 1584 aa28.49■■■□□ 2.15
PDLIM2-206ENST00000409141 VPS8Q8N3P4 1428 aa28.48■■■□□ 2.15
PDLIM2-206ENST00000409141 MYO5CQ9NQX4 1742 aa28.46■■■□□ 2.15
PDLIM2-206ENST00000409141 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
PDLIM2-206ENST00000409141 DENND4BO75064 1496 aaPredicted RBP28.45■■■□□ 2.14
PDLIM2-206ENST00000409141 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
PDLIM2-206ENST00000409141 ARHGAP5Q13017 1502 aa28.42■■■□□ 2.14
PDLIM2-206ENST00000409141 ADGRL1O94910 1474 aa28.41■■■□□ 2.14
PDLIM2-206ENST00000409141 SCAPERQ9BY12 1400 aa28.4■■■□□ 2.14
PDLIM2-206ENST00000409141 FRMPD1Q5SYB0 1578 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms