RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 ARHGAP35Q9NRY4 1499 aa9.54□□□□□ -0.88
RAPGEF4-204ENST00000409036 PELP1Q8IZL8 1130 aaKnown RBP9.54□□□□□ -0.88
RAPGEF4-204ENST00000409036 GAPVD1Q14C86 1478 aa9.54□□□□□ -0.88
RAPGEF4-204ENST00000409036 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
RAPGEF4-204ENST00000409036 PBRM1Q86U86 1689 aa9.52□□□□□ -0.88
RAPGEF4-204ENST00000409036 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
RAPGEF4-204ENST00000409036 CFAP43Q8NDM7 1665 aa9.5□□□□□ -0.89
RAPGEF4-204ENST00000409036 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
RAPGEF4-204ENST00000409036 ADAMTS12P58397 1594 aa9.49□□□□□ -0.89
RAPGEF4-204ENST00000409036 SAMD9Q5K651 1589 aa9.49□□□□□ -0.89
RAPGEF4-204ENST00000409036 GRIN2BQ13224 1484 aa9.49□□□□□ -0.89
RAPGEF4-204ENST00000409036 TIAM1Q13009 1591 aa9.47□□□□□ -0.89
RAPGEF4-204ENST00000409036 FMN1Q68DA7 1419 aa9.47□□□□□ -0.89
RAPGEF4-204ENST00000409036 CASKIN1Q8WXD9 1431 aa9.45□□□□□ -0.9
RAPGEF4-204ENST00000409036 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
RAPGEF4-204ENST00000409036 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
RAPGEF4-204ENST00000409036 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
RAPGEF4-204ENST00000409036 HNRNPUL2Q1KMD3 747 aaKnown RBP9.43□□□□□ -0.9
RAPGEF4-204ENST00000409036 ERCC6Q03468 1493 aa9.42□□□□□ -0.9
RAPGEF4-204ENST00000409036 PCF11O94913 1555 aaKnown RBP9.42□□□□□ -0.9
RAPGEF4-204ENST00000409036 IQGAP2Q13576 1575 aa9.42□□□□□ -0.9
RAPGEF4-204ENST00000409036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
RAPGEF4-204ENST00000409036 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
RAPGEF4-204ENST00000409036 GTF3C3Q9Y5Q9 886 aa9.4□□□□□ -0.9
RAPGEF4-204ENST00000409036 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
RAPGEF4-204ENST00000409036 CLSPNQ9HAW4 1339 aa9.4□□□□□ -0.9
RAPGEF4-204ENST00000409036 LRRC9Q6ZRR7 1453 aa9.4□□□□□ -0.9
RAPGEF4-204ENST00000409036 SCAF1Q9H7N4 1312 aaKnown RBP9.4□□□□□ -0.9
RAPGEF4-204ENST00000409036 TDRD9Q8NDG6 1382 aaKnown RBP9.4□□□□□ -0.91
RAPGEF4-204ENST00000409036 EIF4G3O43432 1585 aaKnown RBP9.39□□□□□ -0.91
RAPGEF4-204ENST00000409036 SNAPC4Q5SXM2 1469 aa9.38□□□□□ -0.91
RAPGEF4-204ENST00000409036 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
RAPGEF4-204ENST00000409036 KIAA0586Q9BVV6 1533 aa9.37□□□□□ -0.91
RAPGEF4-204ENST00000409036 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
RAPGEF4-204ENST00000409036 SYNJ2O15056 1496 aa9.35□□□□□ -0.91
RAPGEF4-204ENST00000409036 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
RAPGEF4-204ENST00000409036 GRIN2AQ12879 1464 aa9.34□□□□□ -0.91
RAPGEF4-204ENST00000409036 DNAJC5BQ9UF47 199 aa9.34□□□□□ -0.91
RAPGEF4-204ENST00000409036 FHOD3Q2V2M9 1422 aa9.34□□□□□ -0.91
RAPGEF4-204ENST00000409036 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
RAPGEF4-204ENST00000409036 NEUROD1Q13562 356 aa9.32□□□□□ -0.92
RAPGEF4-204ENST00000409036 SUPT6HQ7KZ85 1726 aaKnown RBP9.31□□□□□ -0.92
RAPGEF4-204ENST00000409036 KIAA0556O60303 1618 aa9.31□□□□□ -0.92
RAPGEF4-204ENST00000409036 NUP160Q12769 1436 aa9.3□□□□□ -0.92
RAPGEF4-204ENST00000409036 ZNF608Q9ULD9 1512 aaPredicted RBP9.3□□□□□ -0.92
RAPGEF4-204ENST00000409036 ITGAEP38570 1179 aa9.29□□□□□ -0.92
RAPGEF4-204ENST00000409036 ARHGEF11O15085 1522 aa9.29□□□□□ -0.92
RAPGEF4-204ENST00000409036 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
RAPGEF4-204ENST00000409036 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
RAPGEF4-204ENST00000409036 CARMIL2Q6F5E8 1435 aa9.26□□□□□ -0.93
RAPGEF4-204ENST00000409036 DISP1Q96F81 1524 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 CEP170Q5SW79 1584 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 RAPGEF6Q8TEU7 1601 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 MTUS2Q5JR59 1369 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 MIA2Q96PC5 1412 aa9.25□□□□□ -0.93
RAPGEF4-204ENST00000409036 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
RAPGEF4-204ENST00000409036 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
RAPGEF4-204ENST00000409036 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
RAPGEF4-204ENST00000409036 AKNAQ7Z591 1439 aa9.24□□□□□ -0.93
RAPGEF4-204ENST00000409036 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
RAPGEF4-204ENST00000409036 NCOA2Q15596 1464 aa9.22□□□□□ -0.93
RAPGEF4-204ENST00000409036 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
RAPGEF4-204ENST00000409036 ADCY10Q96PN6 1610 aa9.22□□□□□ -0.93
RAPGEF4-204ENST00000409036 SETD5Q9C0A6 1442 aa9.22□□□□□ -0.93
RAPGEF4-204ENST00000409036 DHX57Q6P158 1386 aaKnown RBP9.2□□□□□ -0.94
RAPGEF4-204ENST00000409036 ITSN2Q9NZM3 1697 aa9.19□□□□□ -0.94
RAPGEF4-204ENST00000409036 PTPN23Q9H3S7 1636 aa9.19□□□□□ -0.94
RAPGEF4-204ENST00000409036 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
RAPGEF4-204ENST00000409036 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
RAPGEF4-204ENST00000409036 SHROOM2Q13796 1616 aa9.19□□□□□ -0.94
RAPGEF4-204ENST00000409036 TIMELESSQ9UNS1 1208 aa9.18□□□□□ -0.94
RAPGEF4-204ENST00000409036 ABCA8O94911 1581 aa9.17□□□□□ -0.94
RAPGEF4-204ENST00000409036 GCC2Q8IWJ2 1684 aa9.17□□□□□ -0.94
RAPGEF4-204ENST00000409036 HFM1A2PYH4 1435 aa9.17□□□□□ -0.94
RAPGEF4-204ENST00000409036 P3H3Q8IVL6 736 aa9.17□□□□□ -0.94
RAPGEF4-204ENST00000409036 NUP153P49790 1475 aaKnown RBP9.17□□□□□ -0.94
RAPGEF4-204ENST00000409036 MAGI3Q5TCQ9 1506 aa9.15□□□□□ -0.94
RAPGEF4-204ENST00000409036 TROQ12816 1431 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF4-204ENST00000409036 RAB3GAP2Q9H2M9 1393 aa9.15□□□□□ -0.94
RAPGEF4-204ENST00000409036 MYT1Q01538 1121 aa9.14□□□□□ -0.95
RAPGEF4-204ENST00000409036 ROCK1Q13464 1354 aa9.13□□□□□ -0.95
RAPGEF4-204ENST00000409036 CHD1O14646 1710 aa9.13□□□□□ -0.95
RAPGEF4-204ENST00000409036 MIER1Q8N108 512 aa9.13□□□□□ -0.95
RAPGEF4-204ENST00000409036 DNMT1P26358 1616 aaKnown RBP9.12□□□□□ -0.95
RAPGEF4-204ENST00000409036 BCANQ96GW7 911 aa9.12□□□□□ -0.95
RAPGEF4-204ENST00000409036 CDK13Q14004 1512 aaKnown RBP9.12□□□□□ -0.95
RAPGEF4-204ENST00000409036 KIF14Q15058 1648 aa9.12□□□□□ -0.95
RAPGEF4-204ENST00000409036 UACAQ9BZF9 1416 aa9.11□□□□□ -0.95
RAPGEF4-204ENST00000409036 JPH4Q96JJ6 628 aa9.11□□□□□ -0.95
RAPGEF4-204ENST00000409036 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
RAPGEF4-204ENST00000409036 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
RAPGEF4-204ENST00000409036 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
RAPGEF4-204ENST00000409036 CLASP1Q7Z460 1538 aa9.1□□□□□ -0.95
RAPGEF4-204ENST00000409036 SHANK2Q9UPX8 1470 aa9.09□□□□□ -0.95
RAPGEF4-204ENST00000409036 NEFLP07196 543 aa9.08□□□□□ -0.96
RAPGEF4-204ENST00000409036 UHRF1BP1LA0JNW5 1464 aa9.08□□□□□ -0.96
RAPGEF4-204ENST00000409036 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
RAPGEF4-204ENST00000409036 NAIPQ13075 1403 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms