RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
RAPGEF4-204ENST00000409036 CCDC180Q9P1Z9 1646 aa12.05□□□□□ -0.48
RAPGEF4-204ENST00000409036 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
RAPGEF4-204ENST00000409036 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
RAPGEF4-204ENST00000409036 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
RAPGEF4-204ENST00000409036 NACADO15069 1562 aa11.14□□□□□ -0.63
RAPGEF4-204ENST00000409036 SHROOM4Q9ULL8 1493 aa11□□□□□ -0.65
RAPGEF4-204ENST00000409036 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
RAPGEF4-204ENST00000409036 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
RAPGEF4-204ENST00000409036 ABCC9O60706 1549 aa10.91□□□□□ -0.66
RAPGEF4-204ENST00000409036 SCRIBQ14160 1630 aa10.85□□□□□ -0.67
RAPGEF4-204ENST00000409036 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
RAPGEF4-204ENST00000409036 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-204ENST00000409036 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF4-204ENST00000409036 UNC13AQ9UPW8 1703 aa10.64□□□□□ -0.71
RAPGEF4-204ENST00000409036 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
RAPGEF4-204ENST00000409036 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.72
RAPGEF4-204ENST00000409036 MROH2BQ7Z745 1585 aa10.52□□□□□ -0.73
RAPGEF4-204ENST00000409036 CECR2Q9BXF3 1484 aa10.5□□□□□ -0.73
RAPGEF4-204ENST00000409036 PEG3Q9GZU2 1588 aa10.49□□□□□ -0.73
RAPGEF4-204ENST00000409036 TOP2AP11388 1531 aaKnown RBP10.48□□□□□ -0.73
RAPGEF4-204ENST00000409036 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.74
RAPGEF4-204ENST00000409036 WIZO95785 1651 aa10.44□□□□□ -0.74
RAPGEF4-204ENST00000409036 SMARCA2P51531 1590 aa10.38□□□□□ -0.75
RAPGEF4-204ENST00000409036 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
RAPGEF4-204ENST00000409036 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
RAPGEF4-204ENST00000409036 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
RAPGEF4-204ENST00000409036 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.76
RAPGEF4-204ENST00000409036 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
RAPGEF4-204ENST00000409036 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
RAPGEF4-204ENST00000409036 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
RAPGEF4-204ENST00000409036 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
RAPGEF4-204ENST00000409036 PABPN1Q86U42 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAPGEF4-204ENST00000409036 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
RAPGEF4-204ENST00000409036 EEA1Q15075 1411 aa10.17□□□□□ -0.78
RAPGEF4-204ENST00000409036 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
RAPGEF4-204ENST00000409036 FAM9AQ8IZU1 332 aaPredicted RBP10.07□□□□□ -0.8
RAPGEF4-204ENST00000409036 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
RAPGEF4-204ENST00000409036 HRCP23327 699 aa10.05□□□□□ -0.8
RAPGEF4-204ENST00000409036 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
RAPGEF4-204ENST00000409036 BIVM-ERCC5R4GMW8 1640 aa10.04□□□□□ -0.8
RAPGEF4-204ENST00000409036 ABCC8Q09428 1581 aa10.02□□□□□ -0.81
RAPGEF4-204ENST00000409036 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
RAPGEF4-204ENST00000409036 CFTRP13569 1480 aa10.01□□□□□ -0.81
RAPGEF4-204ENST00000409036 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
RAPGEF4-204ENST00000409036 CC2D2AQ9P2K1 1620 aa9.98□□□□□ -0.81
RAPGEF4-204ENST00000409036 KIF21BO75037 1637 aa9.97□□□□□ -0.81
RAPGEF4-204ENST00000409036 SYNJ1O43426 1573 aa9.97□□□□□ -0.81
RAPGEF4-204ENST00000409036 GOLGA3Q08378 1498 aa9.93□□□□□ -0.82
RAPGEF4-204ENST00000409036 CEP164Q9UPV0 1460 aa9.93□□□□□ -0.82
RAPGEF4-204ENST00000409036 TNIKQ9UKE5 1360 aa9.92□□□□□ -0.82
RAPGEF4-204ENST00000409036 TTBK1Q5TCY1 1321 aaPredicted RBP9.91□□□□□ -0.82
RAPGEF4-204ENST00000409036 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
RAPGEF4-204ENST00000409036 ERICH3Q5RHP9 1530 aa9.89□□□□□ -0.83
RAPGEF4-204ENST00000409036 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
RAPGEF4-204ENST00000409036 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
RAPGEF4-204ENST00000409036 SOGA1O94964 1423 aa9.86□□□□□ -0.83
RAPGEF4-204ENST00000409036 CUX1P39880 1505 aa9.86□□□□□ -0.83
RAPGEF4-204ENST00000409036 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
RAPGEF4-204ENST00000409036 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
RAPGEF4-204ENST00000409036 DNMBPQ6XZF7 1577 aa9.82□□□□□ -0.84
RAPGEF4-204ENST00000409036 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
RAPGEF4-204ENST00000409036 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
RAPGEF4-204ENST00000409036 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
RAPGEF4-204ENST00000409036 RUSC2Q8N2Y8 1516 aa9.77□□□□□ -0.85
RAPGEF4-204ENST00000409036 PDS5BQ9NTI5 1447 aa9.75□□□□□ -0.85
RAPGEF4-204ENST00000409036 ABCA10Q8WWZ4 1543 aa9.73□□□□□ -0.85
RAPGEF4-204ENST00000409036 FGD5Q6ZNL6 1462 aa9.72□□□□□ -0.85
RAPGEF4-204ENST00000409036 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
RAPGEF4-204ENST00000409036 ZEB1P37275 1124 aaPredicted RBP9.72□□□□□ -0.85
RAPGEF4-204ENST00000409036 CUL7Q14999 1698 aa9.72□□□□□ -0.85
RAPGEF4-204ENST00000409036 WDR97A6NE52 1622 aa9.72□□□□□ -0.85
RAPGEF4-204ENST00000409036 TOPBP1Q92547 1522 aa9.71□□□□□ -0.85
RAPGEF4-204ENST00000409036 CLIP1P30622 1438 aa9.7□□□□□ -0.86
RAPGEF4-204ENST00000409036 RAPGEF2Q9Y4G8 1499 aa9.7□□□□□ -0.86
RAPGEF4-204ENST00000409036 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
RAPGEF4-204ENST00000409036 VPS8Q8N3P4 1428 aa9.69□□□□□ -0.86
RAPGEF4-204ENST00000409036 CUX2O14529 1486 aa9.68□□□□□ -0.86
RAPGEF4-204ENST00000409036 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.86
RAPGEF4-204ENST00000409036 IGF1RP08069 1367 aa9.63□□□□□ -0.87
RAPGEF4-204ENST00000409036 ABCA5Q8WWZ7 1642 aa9.63□□□□□ -0.87
RAPGEF4-204ENST00000409036 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
RAPGEF4-204ENST00000409036 MAP3K1Q13233 1512 aa9.62□□□□□ -0.87
RAPGEF4-204ENST00000409036 URB2Q14146 1524 aaKnown RBP9.62□□□□□ -0.87
RAPGEF4-204ENST00000409036 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
RAPGEF4-204ENST00000409036 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
RAPGEF4-204ENST00000409036 KIF21AQ7Z4S6 1674 aa9.61□□□□□ -0.87
RAPGEF4-204ENST00000409036 NESP48681 1621 aa9.61□□□□□ -0.87
RAPGEF4-204ENST00000409036 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
RAPGEF4-204ENST00000409036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF4-204ENST00000409036 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
RAPGEF4-204ENST00000409036 CTTNBP2Q8WZ74 1663 aa9.59□□□□□ -0.87
RAPGEF4-204ENST00000409036 ARAP1Q96P48 1450 aa9.58□□□□□ -0.88
RAPGEF4-204ENST00000409036 WDR62O43379 1518 aa9.58□□□□□ -0.88
RAPGEF4-204ENST00000409036 TARBP1Q13395 1621 aaKnown RBP9.57□□□□□ -0.88
RAPGEF4-204ENST00000409036 FHAD1B1AJZ9 1412 aa9.56□□□□□ -0.88
RAPGEF4-204ENST00000409036 CENPBP07199 599 aaPredicted RBP9.56□□□□□ -0.88
RAPGEF4-204ENST00000409036 APLP2Q06481 763 aa9.56□□□□□ -0.88
RAPGEF4-204ENST00000409036 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.88
RAPGEF4-204ENST00000409036 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms