RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 PRG4Q92954 1404 aaPredicted RBP31.56■■■□□ 2.64
PTPN18-203ENST00000409022 ERCC6L2Q5T890 1561 aa31.53■■■□□ 2.64
PTPN18-203ENST00000409022 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
PTPN18-203ENST00000409022 KIAA0586Q9BVV6 1533 aa31.52■■■□□ 2.64
PTPN18-203ENST00000409022 RAPGEF2Q9Y4G8 1499 aa31.35■■■□□ 2.61
PTPN18-203ENST00000409022 CARMIL2Q6F5E8 1435 aa31.28■■■□□ 2.6
PTPN18-203ENST00000409022 NPM1P06748 294 aaKnown RBP eCLIP31.26■■■□□ 2.59
PTPN18-203ENST00000409022 IQGAP2Q13576 1575 aa31.23■■■□□ 2.59
PTPN18-203ENST00000409022 PTPRGP23470 1445 aa31.17■■■□□ 2.58
PTPN18-203ENST00000409022 TNIKQ9UKE5 1360 aa31.16■■■□□ 2.58
PTPN18-203ENST00000409022 PRXQ9BXM0 1461 aa31.09■■■□□ 2.57
PTPN18-203ENST00000409022 TTBK1Q5TCY1 1321 aaPredicted RBP31.08■■■□□ 2.57
PTPN18-203ENST00000409022 UGGT2Q9NYU1 1516 aa31.06■■■□□ 2.56
PTPN18-203ENST00000409022 CSRNP3Q8WYN3 585 aa31.05■■■□□ 2.56
PTPN18-203ENST00000409022 EEA1Q15075 1411 aa31.05■■■□□ 2.56
PTPN18-203ENST00000409022 ADCY10Q96PN6 1610 aa31.02■■■□□ 2.56
PTPN18-203ENST00000409022 DISP1Q96F81 1524 aa31.01■■■□□ 2.55
PTPN18-203ENST00000409022 MAPKBP1O60336 1514 aa31■■■□□ 2.55
PTPN18-203ENST00000409022 GOLGA3Q08378 1498 aa30.95■■■□□ 2.55
PTPN18-203ENST00000409022 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
PTPN18-203ENST00000409022 UACAQ9BZF9 1416 aa30.93■■■□□ 2.54
PTPN18-203ENST00000409022 FAM69CQ0P6D2 419 aa30.93■■■□□ 2.54
PTPN18-203ENST00000409022 KIAA0556O60303 1618 aa30.92■■■□□ 2.54
PTPN18-203ENST00000409022 ABCC10Q5T3U5 1492 aa30.92■■■□□ 2.54
PTPN18-203ENST00000409022 UHRF1BP1LA0JNW5 1464 aa30.91■■■□□ 2.54
PTPN18-203ENST00000409022 ABCC2Q92887 1545 aa30.91■■■□□ 2.54
PTPN18-203ENST00000409022 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
PTPN18-203ENST00000409022 CHIC1Q5VXU3 224 aa30.8■■■□□ 2.52
PTPN18-203ENST00000409022 KIF13AQ9H1H9 1805 aa30.8■■■□□ 2.52
PTPN18-203ENST00000409022 PLB1Q6P1J6 1458 aa30.79■■■□□ 2.52
PTPN18-203ENST00000409022 DIP2BQ9P265 1576 aa30.79■■■□□ 2.52
PTPN18-203ENST00000409022 ASXL2Q76L83 1435 aa30.74■■■□□ 2.51
PTPN18-203ENST00000409022 KDM5BQ9UGL1 1544 aa30.73■■■□□ 2.51
PTPN18-203ENST00000409022 P3H3Q8IVL6 736 aa30.63■■■□□ 2.49
PTPN18-203ENST00000409022 KIF21BO75037 1637 aa30.62■■■□□ 2.49
PTPN18-203ENST00000409022 ABCA8O94911 1581 aa30.6■■■□□ 2.49
PTPN18-203ENST00000409022 ZCCHC11Q5TAX3 1644 aaKnown RBP30.59■■■□□ 2.49
PTPN18-203ENST00000409022 GLI2P10070 1586 aa30.59■■■□□ 2.49
PTPN18-203ENST00000409022 SAMD9Q5K651 1589 aa30.56■■■□□ 2.48
PTPN18-203ENST00000409022 EPRSP07814 1512 aaKnown RBP30.54■■■□□ 2.48
PTPN18-203ENST00000409022 RANGAP1P46060 587 aaPredicted RBP30.54■■■□□ 2.48
PTPN18-203ENST00000409022 WDR7Q9Y4E6 1490 aa30.53■■■□□ 2.48
PTPN18-203ENST00000409022 UBTFP17480 764 aaKnown RBP30.51■■■□□ 2.47
PTPN18-203ENST00000409022 KDM6BO15054 1643 aa30.45■■■□□ 2.47
PTPN18-203ENST00000409022 TSPOAP1O95153 1857 aa30.45■■■□□ 2.47
PTPN18-203ENST00000409022 EFCAB5A4FU69 1503 aa30.45■■■□□ 2.47
PTPN18-203ENST00000409022 TEX14Q8IWB6 1497 aa30.43■■■□□ 2.46
PTPN18-203ENST00000409022 FHOD3Q2V2M9 1422 aa30.41■■■□□ 2.46
PTPN18-203ENST00000409022 KCNH8Q96L42 1107 aa30.41■■■□□ 2.46
PTPN18-203ENST00000409022 EHMT2Q96KQ7 1210 aa30.4■■■□□ 2.46
PTPN18-203ENST00000409022 ARID3CA6NKF2 412 aa30.39■■■□□ 2.46
PTPN18-203ENST00000409022 ATP10BO94823 1461 aa30.38■■■□□ 2.45
PTPN18-203ENST00000409022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.38■■■□□ 2.45
PTPN18-203ENST00000409022 HNRNPUL2Q1KMD3 747 aaKnown RBP30.38■■■□□ 2.45
PTPN18-203ENST00000409022 RAPGEF6Q8TEU7 1601 aa30.37■■■□□ 2.45
PTPN18-203ENST00000409022 MAP3K4Q9Y6R4 1608 aa30.37■■■□□ 2.45
PTPN18-203ENST00000409022 AEBP2Q6ZN18 517 aaPredicted RBP30.36■■■□□ 2.45
PTPN18-203ENST00000409022 CD109Q6YHK3 1445 aa30.32■■■□□ 2.44
PTPN18-203ENST00000409022 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
PTPN18-203ENST00000409022 NUP153P49790 1475 aaKnown RBP30.27■■■□□ 2.44
PTPN18-203ENST00000409022 MAGI3Q5TCQ9 1506 aa30.27■■■□□ 2.44
PTPN18-203ENST00000409022 CFAP43Q8NDM7 1665 aa30.25■■■□□ 2.43
PTPN18-203ENST00000409022 FMN1Q68DA7 1419 aa30.22■■■□□ 2.43
PTPN18-203ENST00000409022 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
PTPN18-203ENST00000409022 ARHGAP35Q9NRY4 1499 aa30.16■■■□□ 2.42
PTPN18-203ENST00000409022 COL17A1Q9UMD9 1497 aaPredicted RBP30.12■■■□□ 2.41
PTPN18-203ENST00000409022 ATP1B4Q9UN42 357 aaPredicted RBP30.12■■■□□ 2.41
PTPN18-203ENST00000409022 PHLDB1Q86UU1 1377 aa30.12■■■□□ 2.41
PTPN18-203ENST00000409022 ABCA9Q8IUA7 1624 aa30.11■■■□□ 2.41
PTPN18-203ENST00000409022 CDK11AQ9UQ88 783 aaPredicted RBP30.07■■■□□ 2.4
PTPN18-203ENST00000409022 HECW1Q76N89 1606 aa30.04■■■□□ 2.4
PTPN18-203ENST00000409022 ARAP3Q8WWN8 1544 aa30.01■■■□□ 2.39
PTPN18-203ENST00000409022 NEO1Q92859 1461 aa30■■■□□ 2.39
PTPN18-203ENST00000409022 CDK13Q14004 1512 aaKnown RBP29.98■■■□□ 2.39
PTPN18-203ENST00000409022 CLIP1P30622 1438 aa29.93■■■□□ 2.38
PTPN18-203ENST00000409022 KDM4FA0A1W2PPD8 638 aa29.92■■■□□ 2.38
PTPN18-203ENST00000409022 CASKIN1Q8WXD9 1431 aa29.89■■■□□ 2.38
PTPN18-203ENST00000409022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.89■■■□□ 2.38
PTPN18-203ENST00000409022 CCDC18Q5T9S5 1454 aa29.86■■■□□ 2.37
PTPN18-203ENST00000409022 FANCAO15360 1455 aa29.85■■■□□ 2.37
PTPN18-203ENST00000409022 CFAP74Q9C0B2 1584 aa29.84■■■□□ 2.37
PTPN18-203ENST00000409022 TROQ12816 1431 aaPredicted RBP29.83■■■□□ 2.37
PTPN18-203ENST00000409022 RAPGEF3O95398 923 aa29.83■■■□□ 2.37
PTPN18-203ENST00000409022 ADGRL1O94910 1474 aa29.82■■■□□ 2.36
PTPN18-203ENST00000409022 AKNAQ7Z591 1439 aa29.82■■■□□ 2.36
PTPN18-203ENST00000409022 TTC37Q6PGP7 1564 aa29.81■■■□□ 2.36
PTPN18-203ENST00000409022 DENND4BO75064 1496 aaPredicted RBP29.8■■■□□ 2.36
PTPN18-203ENST00000409022 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
PTPN18-203ENST00000409022 PLCH2O75038 1416 aa29.79■■■□□ 2.36
PTPN18-203ENST00000409022 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
PTPN18-203ENST00000409022 KIF14Q15058 1648 aa29.77■■■□□ 2.36
PTPN18-203ENST00000409022 EFCAB2Q5VUJ9 269 aa29.76■■■□□ 2.35
PTPN18-203ENST00000409022 CEP162Q5TB80 1403 aa29.67■■■□□ 2.34
PTPN18-203ENST00000409022 FRMPD1Q5SYB0 1578 aa29.65■■■□□ 2.34
PTPN18-203ENST00000409022 SCAPERQ9BY12 1400 aa29.65■■■□□ 2.34
PTPN18-203ENST00000409022 MYO5CQ9NQX4 1742 aa29.65■■■□□ 2.34
PTPN18-203ENST00000409022 LRRIQ1Q96JM4 1722 aa29.63■■■□□ 2.33
PTPN18-203ENST00000409022 ARHGAP5Q13017 1502 aa29.62■■■□□ 2.33
PTPN18-203ENST00000409022 ARID4BQ4LE39 1312 aaPredicted RBP29.61■■■□□ 2.33
PTPN18-203ENST00000409022 MAGI2Q86UL8 1455 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms