RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 NISCHQ9Y2I1 1504 aa45.32■■■■■ 4.85
PTPN18-203ENST00000409022 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.06
PTPN18-203ENST00000409022 ABCC9O60706 1549 aa39.96■■■■□ 3.99
PTPN18-203ENST00000409022 RB1CC1Q8TDY2 1594 aa38.32■■■■□ 3.73
PTPN18-203ENST00000409022 NACADO15069 1562 aa38.19■■■■□ 3.7
PTPN18-203ENST00000409022 DCAF8L2P0C7V8 631 aa38.15■■■■□ 3.7
PTPN18-203ENST00000409022 MYO15BQ96JP2 1530 aa37.86■■■■□ 3.65
PTPN18-203ENST00000409022 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
PTPN18-203ENST00000409022 DCAF1Q9Y4B6 1507 aa37.52■■■■□ 3.6
PTPN18-203ENST00000409022 PABPN1Q86U42 306 aaKnown RBP eCLIP37.31■■■■□ 3.562e-6■■□□□ 13.9
PTPN18-203ENST00000409022 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
PTPN18-203ENST00000409022 BICRAQ9NZM4 1560 aa37.03■■■■□ 3.52
PTPN18-203ENST00000409022 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
PTPN18-203ENST00000409022 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
PTPN18-203ENST00000409022 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
PTPN18-203ENST00000409022 EIF4G1Q04637 1599 aaKnown RBP36.18■■■■□ 3.38
PTPN18-203ENST00000409022 CC2D2AQ9P2K1 1620 aa36.09■■■■□ 3.37
PTPN18-203ENST00000409022 CECR2Q9BXF3 1484 aa36■■■■□ 3.35
PTPN18-203ENST00000409022 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
PTPN18-203ENST00000409022 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
PTPN18-203ENST00000409022 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
PTPN18-203ENST00000409022 ATAD2BQ9ULI0 1458 aa35.17■■■■□ 3.22
PTPN18-203ENST00000409022 SMARCA2P51531 1590 aa35.16■■■■□ 3.22
PTPN18-203ENST00000409022 HMGXB3Q12766 1538 aa35.01■■■■□ 3.2
PTPN18-203ENST00000409022 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
PTPN18-203ENST00000409022 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
PTPN18-203ENST00000409022 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
PTPN18-203ENST00000409022 ERCC6Q03468 1493 aa34.58■■■■□ 3.13
PTPN18-203ENST00000409022 WIZO95785 1651 aa34.43■■■■□ 3.1
PTPN18-203ENST00000409022 NESP48681 1621 aa34.41■■■■□ 3.1
PTPN18-203ENST00000409022 RSF1Q96T23 1441 aaPredicted RBP34.39■■■■□ 3.1
PTPN18-203ENST00000409022 LAMC3Q9Y6N6 1575 aa34.36■■■■□ 3.09
PTPN18-203ENST00000409022 CUX2O14529 1486 aa34.33■■■■□ 3.09
PTPN18-203ENST00000409022 PDS5BQ9NTI5 1447 aa34.24■■■■□ 3.07
PTPN18-203ENST00000409022 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
PTPN18-203ENST00000409022 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
PTPN18-203ENST00000409022 THOC2Q8NI27 1593 aaKnown RBP33.96■■■■□ 3.03
PTPN18-203ENST00000409022 KIF21AQ7Z4S6 1674 aa33.93■■■■□ 3.02
PTPN18-203ENST00000409022 CFTRP13569 1480 aa33.9■■■■□ 3.02
PTPN18-203ENST00000409022 MRC2Q9UBG0 1479 aa33.84■■■■□ 3.01
PTPN18-203ENST00000409022 CEP164Q9UPV0 1460 aa33.82■■■■□ 3
PTPN18-203ENST00000409022 FANCD2Q9BXW9 1451 aa33.8■■■■□ 3
PTPN18-203ENST00000409022 CCDC88BA6NC98 1476 aa33.74■■■□□ 2.99
PTPN18-203ENST00000409022 DNAJC5Q9H3Z4 198 aa33.73■■■□□ 2.99
PTPN18-203ENST00000409022 WDR62O43379 1518 aa33.69■■■□□ 2.98
PTPN18-203ENST00000409022 PRDM2Q13029 1718 aa33.46■■■□□ 2.95
PTPN18-203ENST00000409022 URB2Q14146 1524 aaKnown RBP33.42■■■□□ 2.94
PTPN18-203ENST00000409022 SUPT5HO00267 1087 aaKnown RBP33.3■■■□□ 2.92
PTPN18-203ENST00000409022 ABCC8Q09428 1581 aa33.28■■■□□ 2.92
PTPN18-203ENST00000409022 TOPBP1Q92547 1522 aa33.18■■■□□ 2.9
PTPN18-203ENST00000409022 IFT140Q96RY7 1462 aa33.15■■■□□ 2.9
PTPN18-203ENST00000409022 DNMBPQ6XZF7 1577 aa33.12■■■□□ 2.89
PTPN18-203ENST00000409022 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
PTPN18-203ENST00000409022 OSCARQ8IYS5 282 aa32.91■■■□□ 2.86
PTPN18-203ENST00000409022 POLA1P09884 1462 aaPredicted RBP32.88■■■□□ 2.85
PTPN18-203ENST00000409022 SOGA1O94964 1423 aa32.8■■■□□ 2.84
PTPN18-203ENST00000409022 TARBP1Q13395 1621 aaKnown RBP32.78■■■□□ 2.84
PTPN18-203ENST00000409022 EIF4G3O43432 1585 aaKnown RBP32.77■■■□□ 2.84
PTPN18-203ENST00000409022 CUX1P39880 1505 aa32.75■■■□□ 2.83
PTPN18-203ENST00000409022 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
PTPN18-203ENST00000409022 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.83
PTPN18-203ENST00000409022 RAD54L2Q9Y4B4 1467 aa32.72■■■□□ 2.83
PTPN18-203ENST00000409022 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
PTPN18-203ENST00000409022 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
PTPN18-203ENST00000409022 FBLN2P98095 1184 aa32.53■■■□□ 2.8
PTPN18-203ENST00000409022 WRNQ14191 1432 aaPredicted RBP eCLIP32.5■■■□□ 2.79
PTPN18-203ENST00000409022 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
PTPN18-203ENST00000409022 GRIN2BQ13224 1484 aa32.47■■■□□ 2.79
PTPN18-203ENST00000409022 SNAPC4Q5SXM2 1469 aa32.43■■■□□ 2.78
PTPN18-203ENST00000409022 ABCA10Q8WWZ4 1543 aa32.43■■■□□ 2.78
PTPN18-203ENST00000409022 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
PTPN18-203ENST00000409022 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
PTPN18-203ENST00000409022 GAPVD1Q14C86 1478 aa32.4■■■□□ 2.78
PTPN18-203ENST00000409022 TOP2BQ02880 1626 aa32.39■■■□□ 2.78
PTPN18-203ENST00000409022 CHD1O14646 1710 aa32.36■■■□□ 2.77
PTPN18-203ENST00000409022 BIVM-ERCC5R4GMW8 1640 aa32.35■■■□□ 2.77
PTPN18-203ENST00000409022 SYNJ1O43426 1573 aa32.31■■■□□ 2.76
PTPN18-203ENST00000409022 SYNJ2O15056 1496 aa32.29■■■□□ 2.76
PTPN18-203ENST00000409022 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
PTPN18-203ENST00000409022 ARHGEF11O15085 1522 aa32.25■■■□□ 2.75
PTPN18-203ENST00000409022 RIMBP3CA6NJZ7 1639 aa32.24■■■□□ 2.75
PTPN18-203ENST00000409022 RIMBP3BA6NNM3 1639 aa32.24■■■□□ 2.75
PTPN18-203ENST00000409022 RIMBP3Q9UFD9 1639 aa32.24■■■□□ 2.75
PTPN18-203ENST00000409022 PBRM1Q86U86 1689 aa32.21■■■□□ 2.75
PTPN18-203ENST00000409022 CLASP1Q7Z460 1538 aa32.08■■■□□ 2.73
PTPN18-203ENST00000409022 CYB5RLQ6IPT4 315 aa32.05■■■□□ 2.72
PTPN18-203ENST00000409022 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
PTPN18-203ENST00000409022 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
PTPN18-203ENST00000409022 GRIN2AQ12879 1464 aa32.01■■■□□ 2.71
PTPN18-203ENST00000409022 ADAMTS12P58397 1594 aa32.01■■■□□ 2.71
PTPN18-203ENST00000409022 ARAP1Q96P48 1450 aa31.94■■■□□ 2.7
PTPN18-203ENST00000409022 KIF27Q86VH2 1401 aa31.9■■■□□ 2.7
PTPN18-203ENST00000409022 NUP160Q12769 1436 aa31.88■■■□□ 2.69
PTPN18-203ENST00000409022 CEP170Q5SW79 1584 aa31.79■■■□□ 2.68
PTPN18-203ENST00000409022 IGF1RP08069 1367 aa31.74■■■□□ 2.67
PTPN18-203ENST00000409022 CUL7Q14999 1698 aa31.66■■■□□ 2.66
PTPN18-203ENST00000409022 JPH4Q96JJ6 628 aa31.62■■■□□ 2.65
PTPN18-203ENST00000409022 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
PTPN18-203ENST00000409022 TRHP20396 242 aaPredicted RBP31.59■■■□□ 2.65
PTPN18-203ENST00000409022 CARMIL1Q5VZK9 1371 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms