RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
HDAC9-203ENST00000406072 RAPGEF2Q9Y4G8 1499 aa8.68□□□□□ -1.02
HDAC9-203ENST00000406072 IGF1RP08069 1367 aa8.68□□□□□ -1.02
HDAC9-203ENST00000406072 EFCAB5A4FU69 1503 aa8.68□□□□□ -1.02
HDAC9-203ENST00000406072 SAMD9Q5K651 1589 aa8.68□□□□□ -1.02
HDAC9-203ENST00000406072 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
HDAC9-203ENST00000406072 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
HDAC9-203ENST00000406072 LOC105371045A0A1W2PR82 267 aa8.65□□□□□ -1.02
HDAC9-203ENST00000406072 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
HDAC9-203ENST00000406072 CSRNP3Q8WYN3 585 aa8.64□□□□□ -1.03
HDAC9-203ENST00000406072 SHROOM2Q13796 1616 aa8.63□□□□□ -1.03
HDAC9-203ENST00000406072 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
HDAC9-203ENST00000406072 UGGT2Q9NYU1 1516 aa8.62□□□□□ -1.03
HDAC9-203ENST00000406072 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
HDAC9-203ENST00000406072 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.03
HDAC9-203ENST00000406072 BCL11AQ9H165 835 aa8.6□□□□□ -1.03
HDAC9-203ENST00000406072 NUP160Q12769 1436 aa8.6□□□□□ -1.03
HDAC9-203ENST00000406072 CARMIL1Q5VZK9 1371 aa8.59□□□□□ -1.03
HDAC9-203ENST00000406072 ZNF608Q9ULD9 1512 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-203ENST00000406072 GRIN2AQ12879 1464 aa8.58□□□□□ -1.04
HDAC9-203ENST00000406072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-203ENST00000406072 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
HDAC9-203ENST00000406072 CFAP43Q8NDM7 1665 aa8.57□□□□□ -1.04
HDAC9-203ENST00000406072 CLASP1Q7Z460 1538 aa8.56□□□□□ -1.04
HDAC9-203ENST00000406072 CEP170Q5SW79 1584 aa8.56□□□□□ -1.04
HDAC9-203ENST00000406072 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
HDAC9-203ENST00000406072 CHD1O14646 1710 aa8.55□□□□□ -1.04
HDAC9-203ENST00000406072 KIAA0586Q9BVV6 1533 aa8.55□□□□□ -1.04
HDAC9-203ENST00000406072 CEP162Q5TB80 1403 aa8.55□□□□□ -1.04
HDAC9-203ENST00000406072 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
HDAC9-203ENST00000406072 BCANQ96GW7 911 aa8.52□□□□□ -1.04
HDAC9-203ENST00000406072 KIAA0556O60303 1618 aa8.52□□□□□ -1.04
HDAC9-203ENST00000406072 APLP2Q06481 763 aa8.52□□□□□ -1.05
HDAC9-203ENST00000406072 ARHGAP35Q9NRY4 1499 aa8.52□□□□□ -1.05
HDAC9-203ENST00000406072 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-203ENST00000406072 VPS8Q8N3P4 1428 aa8.5□□□□□ -1.05
HDAC9-203ENST00000406072 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
HDAC9-203ENST00000406072 ANP32EQ9BTT0 268 aa8.48□□□□□ -1.05
HDAC9-203ENST00000406072 TDRD9Q8NDG6 1382 aaKnown RBP8.48□□□□□ -1.05
HDAC9-203ENST00000406072 CLIP1P30622 1438 aa8.48□□□□□ -1.05
HDAC9-203ENST00000406072 DISP1Q96F81 1524 aa8.47□□□□□ -1.05
HDAC9-203ENST00000406072 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.05
HDAC9-203ENST00000406072 HECW1Q76N89 1606 aa8.46□□□□□ -1.06
HDAC9-203ENST00000406072 ADCY10Q96PN6 1610 aa8.46□□□□□ -1.06
HDAC9-203ENST00000406072 CASKIN1Q8WXD9 1431 aa8.45□□□□□ -1.06
HDAC9-203ENST00000406072 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
HDAC9-203ENST00000406072 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
HDAC9-203ENST00000406072 ABCA8O94911 1581 aa8.43□□□□□ -1.06
HDAC9-203ENST00000406072 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
HDAC9-203ENST00000406072 CCDC18Q5T9S5 1454 aa8.43□□□□□ -1.06
HDAC9-203ENST00000406072 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
HDAC9-203ENST00000406072 ARHGEF11O15085 1522 aa8.42□□□□□ -1.06
HDAC9-203ENST00000406072 UHRF1BP1LA0JNW5 1464 aa8.41□□□□□ -1.06
HDAC9-203ENST00000406072 RAPGEF6Q8TEU7 1601 aa8.41□□□□□ -1.06
HDAC9-203ENST00000406072 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-203ENST00000406072 EHBP1L1Q8N3D4 1523 aa8.38□□□□□ -1.07
HDAC9-203ENST00000406072 RANGAP1P46060 587 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-203ENST00000406072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC9-203ENST00000406072 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-203ENST00000406072 CARMIL2Q6F5E8 1435 aa8.35□□□□□ -1.07
HDAC9-203ENST00000406072 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-203ENST00000406072 KDM5BQ9UGL1 1544 aa8.34□□□□□ -1.07
HDAC9-203ENST00000406072 SUPT6HQ7KZ85 1726 aaKnown RBP8.33□□□□□ -1.08
HDAC9-203ENST00000406072 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
HDAC9-203ENST00000406072 ABCC2Q92887 1545 aa8.33□□□□□ -1.08
HDAC9-203ENST00000406072 LRRC9Q6ZRR7 1453 aa8.33□□□□□ -1.08
HDAC9-203ENST00000406072 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
HDAC9-203ENST00000406072 ITSN2Q9NZM3 1697 aa8.31□□□□□ -1.08
HDAC9-203ENST00000406072 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
HDAC9-203ENST00000406072 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
HDAC9-203ENST00000406072 NUP153P49790 1475 aaKnown RBP8.31□□□□□ -1.08
HDAC9-203ENST00000406072 EPRSP07814 1512 aaKnown RBP8.31□□□□□ -1.08
HDAC9-203ENST00000406072 CLSPNQ9HAW4 1339 aa8.3□□□□□ -1.08
HDAC9-203ENST00000406072 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
HDAC9-203ENST00000406072 FHOD3Q2V2M9 1422 aa8.29□□□□□ -1.08
HDAC9-203ENST00000406072 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
HDAC9-203ENST00000406072 FKBP8Q14318 412 aa8.29□□□□□ -1.08
HDAC9-203ENST00000406072 MAGI3Q5TCQ9 1506 aa8.27□□□□□ -1.09
HDAC9-203ENST00000406072 NBR1Q14596 966 aa8.27□□□□□ -1.09
HDAC9-203ENST00000406072 ZCCHC11Q5TAX3 1644 aaKnown RBP8.27□□□□□ -1.09
HDAC9-203ENST00000406072 CHMP7Q8WUX9 453 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-203ENST00000406072 PRG4Q92954 1404 aaPredicted RBP8.26□□□□□ -1.09
HDAC9-203ENST00000406072 CROCC2H7BZ55 1655 aa8.26□□□□□ -1.09
HDAC9-203ENST00000406072 PLPPR3Q6T4P5 718 aa8.26□□□□□ -1.09
HDAC9-203ENST00000406072 GLIPR1L2Q4G1C9 344 aa8.26□□□□□ -1.09
HDAC9-203ENST00000406072 MIER1Q8N108 512 aa8.26□□□□□ -1.09
HDAC9-203ENST00000406072 PRKCSHP14314 528 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-203ENST00000406072 PREX2Q70Z35 1606 aa8.25□□□□□ -1.09
HDAC9-203ENST00000406072 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
HDAC9-203ENST00000406072 KIF14Q15058 1648 aa8.24□□□□□ -1.09
HDAC9-203ENST00000406072 MIA2Q96PC5 1412 aa8.24□□□□□ -1.09
HDAC9-203ENST00000406072 UACAQ9BZF9 1416 aa8.24□□□□□ -1.09
HDAC9-203ENST00000406072 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
HDAC9-203ENST00000406072 MAPKBP1O60336 1514 aa8.23□□□□□ -1.09
HDAC9-203ENST00000406072 AKNAQ7Z591 1439 aa8.23□□□□□ -1.09
HDAC9-203ENST00000406072 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
HDAC9-203ENST00000406072 GLI2P10070 1586 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 ABCA9Q8IUA7 1624 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 CDC42BPAQ5VT25 1732 aa8.22□□□□□ -1.09
HDAC9-203ENST00000406072 MAST1Q9Y2H9 1570 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms