RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 JPH4Q96JJ6 628 aa44.89■■■■■ 4.78
HDAC11-206ENST00000405025 PRG4Q92954 1404 aaPredicted RBP44.89■■■■■ 4.78
HDAC11-206ENST00000405025 KIAA0586Q9BVV6 1533 aa44.85■■■■■ 4.77
HDAC11-206ENST00000405025 RAPGEF2Q9Y4G8 1499 aa44.68■■■■■ 4.74
HDAC11-206ENST00000405025 TRHP20396 242 aaPredicted RBP44.58■■■■■ 4.73
HDAC11-206ENST00000405025 IQGAP2Q13576 1575 aa44.57■■■■■ 4.73
HDAC11-206ENST00000405025 PRXQ9BXM0 1461 aa44.46■■■■■ 4.71
HDAC11-206ENST00000405025 CTTNBP2Q8WZ74 1663 aa44.34■■■■■ 4.69
HDAC11-206ENST00000405025 CARMIL2Q6F5E8 1435 aa44.33■■■■■ 4.69
HDAC11-206ENST00000405025 ADCY10Q96PN6 1610 aa44.33■■■■■ 4.69
HDAC11-206ENST00000405025 DISP1Q96F81 1524 aa44.32■■■■■ 4.69
HDAC11-206ENST00000405025 UGGT2Q9NYU1 1516 aa44.31■■■■■ 4.68
HDAC11-206ENST00000405025 PTPRGP23470 1445 aa44.26■■■■■ 4.68
HDAC11-206ENST00000405025 TNIKQ9UKE5 1360 aa44.26■■■■■ 4.68
HDAC11-206ENST00000405025 CSRNP3Q8WYN3 585 aa44.25■■■■■ 4.67
HDAC11-206ENST00000405025 TTBK1Q5TCY1 1321 aaPredicted RBP44.24■■■■■ 4.67
HDAC11-206ENST00000405025 CHIC1Q5VXU3 224 aa44.21■■■■■ 4.67
HDAC11-206ENST00000405025 EEA1Q15075 1411 aa44.2■■■■■ 4.67
HDAC11-206ENST00000405025 KIAA0556O60303 1618 aa44.18■■■■■ 4.66
HDAC11-206ENST00000405025 FAM9AQ8IZU1 332 aaPredicted RBP44.1■■■■■ 4.65
HDAC11-206ENST00000405025 NPM1P06748 294 aaKnown RBP eCLIP44.07■■■■■ 4.65
HDAC11-206ENST00000405025 MAPKBP1O60336 1514 aa44.06■■■■■ 4.64
HDAC11-206ENST00000405025 KIF13AQ9H1H9 1805 aa44.04■■■■■ 4.64
HDAC11-206ENST00000405025 UACAQ9BZF9 1416 aa43.98■■■■■ 4.63
HDAC11-206ENST00000405025 GOLGA3Q08378 1498 aa43.96■■■■■ 4.63
HDAC11-206ENST00000405025 UHRF1BP1LA0JNW5 1464 aa43.96■■■■■ 4.63
HDAC11-206ENST00000405025 ABCC2Q92887 1545 aa43.95■■■■■ 4.63
HDAC11-206ENST00000405025 ABCC10Q5T3U5 1492 aa43.91■■■■■ 4.62
HDAC11-206ENST00000405025 DIP2BQ9P265 1576 aa43.88■■■■■ 4.61
HDAC11-206ENST00000405025 KIF21BO75037 1637 aa43.88■■■■■ 4.61
HDAC11-206ENST00000405025 FAM69CQ0P6D2 419 aa43.81■■■■■ 4.6
HDAC11-206ENST00000405025 PLB1Q6P1J6 1458 aa43.79■■■■■ 4.6
HDAC11-206ENST00000405025 KDM5BQ9UGL1 1544 aa43.76■■■■■ 4.6
HDAC11-206ENST00000405025 SAMD9Q5K651 1589 aa43.75■■■■■ 4.59
HDAC11-206ENST00000405025 ASXL2Q76L83 1435 aa43.73■■■■■ 4.59
HDAC11-206ENST00000405025 ABCA8O94911 1581 aa43.73■■■■■ 4.59
HDAC11-206ENST00000405025 ZCCHC11Q5TAX3 1644 aaKnown RBP43.73■■■■■ 4.59
HDAC11-206ENST00000405025 P3H3Q8IVL6 736 aa43.72■■■■■ 4.59
HDAC11-206ENST00000405025 RANGAP1P46060 587 aaPredicted RBP43.62■■■■■ 4.57
HDAC11-206ENST00000405025 EHMT2Q96KQ7 1210 aa43.62■■■■■ 4.57
HDAC11-206ENST00000405025 TSPOAP1O95153 1857 aa43.55■■■■■ 4.56
HDAC11-206ENST00000405025 GLI2P10070 1586 aa43.5■■■■■ 4.55
HDAC11-206ENST00000405025 FHOD3Q2V2M9 1422 aa43.48■■■■■ 4.55
HDAC11-206ENST00000405025 EPRSP07814 1512 aaKnown RBP43.48■■■■■ 4.55
HDAC11-206ENST00000405025 UBTFP17480 764 aaKnown RBP43.44■■■■■ 4.54
HDAC11-206ENST00000405025 WDR7Q9Y4E6 1490 aa43.43■■■■■ 4.54
HDAC11-206ENST00000405025 EFCAB5A4FU69 1503 aa43.42■■■■■ 4.54
HDAC11-206ENST00000405025 RAPGEF6Q8TEU7 1601 aa43.4■■■■■ 4.54
HDAC11-206ENST00000405025 ARID3CA6NKF2 412 aa43.39■■■■■ 4.54
HDAC11-206ENST00000405025 PPRC1Q5VV67 1664 aaKnown RBP43.39■■■■■ 4.54
HDAC11-206ENST00000405025 ATP10BO94823 1461 aa43.34■■■■■ 4.53
HDAC11-206ENST00000405025 MAP3K4Q9Y6R4 1608 aa43.33■■■■■ 4.53
HDAC11-206ENST00000405025 KDM6BO15054 1643 aa43.26■■■■■ 4.52
HDAC11-206ENST00000405025 NUP153P49790 1475 aaKnown RBP43.25■■■■■ 4.51
HDAC11-206ENST00000405025 KCNH8Q96L42 1107 aa43.2■■■■■ 4.51
HDAC11-206ENST00000405025 ARHGAP35Q9NRY4 1499 aa43.19■■■■■ 4.51
HDAC11-206ENST00000405025 CFAP43Q8NDM7 1665 aa43.11■■■■■ 4.49
HDAC11-206ENST00000405025 TEX14Q8IWB6 1497 aa43.07■■■■■ 4.49
HDAC11-206ENST00000405025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.06■■■■■ 4.48
HDAC11-206ENST00000405025 HNRNPUL2Q1KMD3 747 aaKnown RBP43.06■■■■■ 4.48
HDAC11-206ENST00000405025 CD109Q6YHK3 1445 aa43.05■■■■■ 4.48
HDAC11-206ENST00000405025 MAGI3Q5TCQ9 1506 aa43■■■■■ 4.47
HDAC11-206ENST00000405025 COL17A1Q9UMD9 1497 aaPredicted RBP43■■■■■ 4.47
HDAC11-206ENST00000405025 FMN1Q68DA7 1419 aa42.98■■■■■ 4.47
HDAC11-206ENST00000405025 ABCA9Q8IUA7 1624 aa42.96■■■■■ 4.47
HDAC11-206ENST00000405025 CDK13Q14004 1512 aaKnown RBP42.95■■■■■ 4.47
HDAC11-206ENST00000405025 HECW1Q76N89 1606 aa42.89■■■■■ 4.46
HDAC11-206ENST00000405025 PLEKHD1A6NEE1 506 aa42.83■■■■■ 4.45
HDAC11-206ENST00000405025 ATP1B4Q9UN42 357 aaPredicted RBP42.82■■■■■ 4.45
HDAC11-206ENST00000405025 CLIP1P30622 1438 aa42.77■■■■■ 4.44
HDAC11-206ENST00000405025 LRRIQ1Q96JM4 1722 aa42.77■■■■■ 4.44
HDAC11-206ENST00000405025 PCF11O94913 1555 aaKnown RBP42.73■■■■■ 4.43
HDAC11-206ENST00000405025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.71■■■■■ 4.43
HDAC11-206ENST00000405025 TTC37Q6PGP7 1564 aa42.69■■■■■ 4.42
HDAC11-206ENST00000405025 CASKIN1Q8WXD9 1431 aa42.65■■■■■ 4.42
HDAC11-206ENST00000405025 ARAP3Q8WWN8 1544 aa42.64■■■■■ 4.42
HDAC11-206ENST00000405025 NEO1Q92859 1461 aa42.6■■■■■ 4.41
HDAC11-206ENST00000405025 AEBP2Q6ZN18 517 aaPredicted RBP42.59■■■■■ 4.41
HDAC11-206ENST00000405025 PHLDB1Q86UU1 1377 aa42.54■■■■■ 4.4
HDAC11-206ENST00000405025 KIF14Q15058 1648 aa42.53■■■■■ 4.4
HDAC11-206ENST00000405025 FYCO1Q9BQS8 1478 aa42.53■■■■■ 4.4
HDAC11-206ENST00000405025 CDK11AQ9UQ88 783 aaPredicted RBP42.51■■■■■ 4.4
HDAC11-206ENST00000405025 TROQ12816 1431 aaPredicted RBP42.51■■■■■ 4.4
HDAC11-206ENST00000405025 CEP162Q5TB80 1403 aa42.5■■■■■ 4.39
HDAC11-206ENST00000405025 CCDC18Q5T9S5 1454 aa42.49■■■■■ 4.39
HDAC11-206ENST00000405025 FANCAO15360 1455 aa42.47■■■■■ 4.39
HDAC11-206ENST00000405025 KDM4FA0A1W2PPD8 638 aa42.46■■■■■ 4.39
HDAC11-206ENST00000405025 FRMPD1Q5SYB0 1578 aa42.44■■■■■ 4.39
HDAC11-206ENST00000405025 LOC105371045A0A1W2PR82 267 aa42.44■■■■■ 4.38
HDAC11-206ENST00000405025 CFAP74Q9C0B2 1584 aa42.44■■■■■ 4.38
HDAC11-206ENST00000405025 RAPGEF3O95398 923 aa42.43■■■■■ 4.38
HDAC11-206ENST00000405025 AKNAQ7Z591 1439 aa42.41■■■■■ 4.38
HDAC11-206ENST00000405025 PLCH2O75038 1416 aa42.39■■■■■ 4.38
HDAC11-206ENST00000405025 MYO5CQ9NQX4 1742 aa42.39■■■■■ 4.38
HDAC11-206ENST00000405025 ADGRL1O94910 1474 aa42.35■■■■■ 4.37
HDAC11-206ENST00000405025 RICTORQ6R327 1708 aa42.32■■■■■ 4.36
HDAC11-206ENST00000405025 DENND4BO75064 1496 aaPredicted RBP42.3■■■■■ 4.36
HDAC11-206ENST00000405025 ARHGAP5Q13017 1502 aa42.2■■■■■ 4.35
HDAC11-206ENST00000405025 CDC42BPBQ9Y5S2 1711 aa42.18■■■■■ 4.34
HDAC11-206ENST00000405025 EFCAB2Q5VUJ9 269 aa42.18■■■■■ 4.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms