RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 JPH4Q96JJ6 628 aa21.67■■□□□ 1.06
SPTLC1P3-201ENST00000403408 ABCC10Q5T3U5 1492 aa21.61■■□□□ 1.05
SPTLC1P3-201ENST00000403408 FAM69CQ0P6D2 419 aa21.6■■□□□ 1.05
SPTLC1P3-201ENST00000403408 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
SPTLC1P3-201ENST00000403408 ADCY10Q96PN6 1610 aa21.56■■□□□ 1.04
SPTLC1P3-201ENST00000403408 DIP2BQ9P265 1576 aa21.56■■□□□ 1.04
SPTLC1P3-201ENST00000403408 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
SPTLC1P3-201ENST00000403408 KDM4FA0A1W2PPD8 638 aa21.53■■□□□ 1.04
SPTLC1P3-201ENST00000403408 TSPOAP1O95153 1857 aa21.44■■□□□ 1.02
SPTLC1P3-201ENST00000403408 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
SPTLC1P3-201ENST00000403408 KDM6BO15054 1643 aa21.42■■□□□ 1.02
SPTLC1P3-201ENST00000403408 IGF1RP08069 1367 aa21.42■■□□□ 1.02
SPTLC1P3-201ENST00000403408 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
SPTLC1P3-201ENST00000403408 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
SPTLC1P3-201ENST00000403408 PTPRGP23470 1445 aa21.29■■□□□ 1
SPTLC1P3-201ENST00000403408 CUL7Q14999 1698 aa21.27■■□□□ 1
SPTLC1P3-201ENST00000403408 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■□□□□ 0.99
SPTLC1P3-201ENST00000403408 ILDR1Q86SU0 546 aaPredicted RBP21.26■□□□□ 0.99
SPTLC1P3-201ENST00000403408 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
SPTLC1P3-201ENST00000403408 ABCC2Q92887 1545 aa21.24■□□□□ 0.99
SPTLC1P3-201ENST00000403408 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
SPTLC1P3-201ENST00000403408 ASXL2Q76L83 1435 aa21.23■□□□□ 0.99
SPTLC1P3-201ENST00000403408 GLI2P10070 1586 aa21.21■□□□□ 0.99
SPTLC1P3-201ENST00000403408 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
SPTLC1P3-201ENST00000403408 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
SPTLC1P3-201ENST00000403408 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
SPTLC1P3-201ENST00000403408 PLB1Q6P1J6 1458 aa21.16■□□□□ 0.98
SPTLC1P3-201ENST00000403408 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
SPTLC1P3-201ENST00000403408 UHRF1BP1LA0JNW5 1464 aa21.15■□□□□ 0.98
SPTLC1P3-201ENST00000403408 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
SPTLC1P3-201ENST00000403408 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
SPTLC1P3-201ENST00000403408 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
SPTLC1P3-201ENST00000403408 EPRSP07814 1512 aaKnown RBP21.11■□□□□ 0.97
SPTLC1P3-201ENST00000403408 MAP3K4Q9Y6R4 1608 aa21.09■□□□□ 0.97
SPTLC1P3-201ENST00000403408 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
SPTLC1P3-201ENST00000403408 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
SPTLC1P3-201ENST00000403408 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.96
SPTLC1P3-201ENST00000403408 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
SPTLC1P3-201ENST00000403408 KIAA0556O60303 1618 aa20.97■□□□□ 0.95
SPTLC1P3-201ENST00000403408 TEX14Q8IWB6 1497 aa20.95■□□□□ 0.94
SPTLC1P3-201ENST00000403408 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
SPTLC1P3-201ENST00000403408 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
SPTLC1P3-201ENST00000403408 MAGI3Q5TCQ9 1506 aa20.86■□□□□ 0.93
SPTLC1P3-201ENST00000403408 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
SPTLC1P3-201ENST00000403408 ABCA8O94911 1581 aa20.85■□□□□ 0.93
SPTLC1P3-201ENST00000403408 KCNH8Q96L42 1107 aa20.83■□□□□ 0.93
SPTLC1P3-201ENST00000403408 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
SPTLC1P3-201ENST00000403408 KIF21BO75037 1637 aa20.79■□□□□ 0.92
SPTLC1P3-201ENST00000403408 CTTNBP2Q8WZ74 1663 aa20.77■□□□□ 0.92
SPTLC1P3-201ENST00000403408 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
SPTLC1P3-201ENST00000403408 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
SPTLC1P3-201ENST00000403408 ARID3CA6NKF2 412 aa20.7■□□□□ 0.9
SPTLC1P3-201ENST00000403408 ATP10BO94823 1461 aa20.69■□□□□ 0.9
SPTLC1P3-201ENST00000403408 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
SPTLC1P3-201ENST00000403408 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SPTLC1P3-201ENST00000403408 ADAMTSL3P82987 1691 aa20.67■□□□□ 0.9
SPTLC1P3-201ENST00000403408 PTPRMP28827 1452 aa20.64■□□□□ 0.89
SPTLC1P3-201ENST00000403408 RAPGEF3O95398 923 aa20.63■□□□□ 0.89
SPTLC1P3-201ENST00000403408 P3H3Q8IVL6 736 aa20.63■□□□□ 0.89
SPTLC1P3-201ENST00000403408 FBXO41Q8TF61 875 aa20.63■□□□□ 0.89
SPTLC1P3-201ENST00000403408 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
SPTLC1P3-201ENST00000403408 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
SPTLC1P3-201ENST00000403408 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
SPTLC1P3-201ENST00000403408 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
SPTLC1P3-201ENST00000403408 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
SPTLC1P3-201ENST00000403408 PHLDB1Q86UU1 1377 aa20.52■□□□□ 0.88
SPTLC1P3-201ENST00000403408 SAMD9Q5K651 1589 aa20.51■□□□□ 0.87
SPTLC1P3-201ENST00000403408 NEO1Q92859 1461 aa20.51■□□□□ 0.87
SPTLC1P3-201ENST00000403408 PCF11O94913 1555 aaKnown RBP20.5■□□□□ 0.87
SPTLC1P3-201ENST00000403408 RAPGEF6Q8TEU7 1601 aa20.49■□□□□ 0.87
SPTLC1P3-201ENST00000403408 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
SPTLC1P3-201ENST00000403408 SIGLEC1Q9BZZ2 1709 aa20.46■□□□□ 0.87
SPTLC1P3-201ENST00000403408 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
SPTLC1P3-201ENST00000403408 RIMS1Q86UR5 1692 aaKnown RBP20.44■□□□□ 0.86
SPTLC1P3-201ENST00000403408 RICTORQ6R327 1708 aa20.43■□□□□ 0.86
SPTLC1P3-201ENST00000403408 ARHGEF40Q8TER5 1519 aa20.43■□□□□ 0.86
SPTLC1P3-201ENST00000403408 HSPA2P54652 639 aa20.42■□□□□ 0.86
SPTLC1P3-201ENST00000403408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.39■□□□□ 0.85
SPTLC1P3-201ENST00000403408 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.85
SPTLC1P3-201ENST00000403408 FHOD3Q2V2M9 1422 aa20.38■□□□□ 0.85
SPTLC1P3-201ENST00000403408 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
SPTLC1P3-201ENST00000403408 AKNAQ7Z591 1439 aa20.37■□□□□ 0.85
SPTLC1P3-201ENST00000403408 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
SPTLC1P3-201ENST00000403408 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
SPTLC1P3-201ENST00000403408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.35■□□□□ 0.85
SPTLC1P3-201ENST00000403408 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
SPTLC1P3-201ENST00000403408 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
SPTLC1P3-201ENST00000403408 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
SPTLC1P3-201ENST00000403408 FANCAO15360 1455 aa20.32■□□□□ 0.84
SPTLC1P3-201ENST00000403408 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
SPTLC1P3-201ENST00000403408 ZMYM4Q5VZL5 1548 aa20.32■□□□□ 0.84
SPTLC1P3-201ENST00000403408 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
SPTLC1P3-201ENST00000403408 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
SPTLC1P3-201ENST00000403408 ZFYVE16Q7Z3T8 1539 aa20.27■□□□□ 0.84
SPTLC1P3-201ENST00000403408 HECW1Q76N89 1606 aa20.27■□□□□ 0.83
SPTLC1P3-201ENST00000403408 MLECQ14165 292 aa20.26■□□□□ 0.83
SPTLC1P3-201ENST00000403408 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
SPTLC1P3-201ENST00000403408 CDK13Q14004 1512 aaKnown RBP20.24■□□□□ 0.83
SPTLC1P3-201ENST00000403408 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
SPTLC1P3-201ENST00000403408 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms