RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
CSNK1D-205ENST00000403276 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
CSNK1D-205ENST00000403276 TRHP20396 242 aaPredicted RBP28.7■■■□□ 2.18
CSNK1D-205ENST00000403276 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
CSNK1D-205ENST00000403276 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
CSNK1D-205ENST00000403276 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
CSNK1D-205ENST00000403276 TTBK1Q5TCY1 1321 aaPredicted RBP28.4■■■□□ 2.14
CSNK1D-205ENST00000403276 ADCY10Q96PN6 1610 aa28.35■■■□□ 2.13
CSNK1D-205ENST00000403276 CARMIL2Q6F5E8 1435 aa28.35■■■□□ 2.13
CSNK1D-205ENST00000403276 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
CSNK1D-205ENST00000403276 PTPRGP23470 1445 aa28.33■■■□□ 2.13
CSNK1D-205ENST00000403276 CTTNBP2Q8WZ74 1663 aa28.32■■■□□ 2.12
CSNK1D-205ENST00000403276 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
CSNK1D-205ENST00000403276 TNIKQ9UKE5 1360 aa28.3■■■□□ 2.12
CSNK1D-205ENST00000403276 NPM1P06748 294 aaKnown RBP eCLIP28.29■■■□□ 2.12
CSNK1D-205ENST00000403276 UGGT2Q9NYU1 1516 aa28.28■■■□□ 2.12
CSNK1D-205ENST00000403276 CSRNP3Q8WYN3 585 aa28.27■■■□□ 2.12
CSNK1D-205ENST00000403276 KIF13AQ9H1H9 1805 aa28.24■■■□□ 2.11
CSNK1D-205ENST00000403276 FAM9AQ8IZU1 332 aaPredicted RBP28.21■■■□□ 2.11
CSNK1D-205ENST00000403276 KIAA0556O60303 1618 aa28.2■■■□□ 2.1
CSNK1D-205ENST00000403276 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
CSNK1D-205ENST00000403276 MAPKBP1O60336 1514 aa28.16■■■□□ 2.1
CSNK1D-205ENST00000403276 EEA1Q15075 1411 aa28.15■■■□□ 2.1
CSNK1D-205ENST00000403276 FAM69CQ0P6D2 419 aa28.12■■■□□ 2.09
CSNK1D-205ENST00000403276 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
CSNK1D-205ENST00000403276 ABCC10Q5T3U5 1492 aa28.11■■■□□ 2.09
CSNK1D-205ENST00000403276 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
CSNK1D-205ENST00000403276 UHRF1BP1LA0JNW5 1464 aa28.08■■■□□ 2.09
CSNK1D-205ENST00000403276 GOLGA3Q08378 1498 aa28.08■■■□□ 2.09
CSNK1D-205ENST00000403276 DIP2BQ9P265 1576 aa28.07■■■□□ 2.08
CSNK1D-205ENST00000403276 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
CSNK1D-205ENST00000403276 TSPOAP1O95153 1857 aa27.98■■■□□ 2.07
CSNK1D-205ENST00000403276 PLB1Q6P1J6 1458 aa27.98■■■□□ 2.07
CSNK1D-205ENST00000403276 ASXL2Q76L83 1435 aa27.98■■■□□ 2.07
CSNK1D-205ENST00000403276 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
CSNK1D-205ENST00000403276 ZCCHC11Q5TAX3 1644 aaKnown RBP27.96■■■□□ 2.07
CSNK1D-205ENST00000403276 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
CSNK1D-205ENST00000403276 KIF21BO75037 1637 aa27.94■■■□□ 2.06
CSNK1D-205ENST00000403276 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
CSNK1D-205ENST00000403276 ABCA8O94911 1581 aa27.92■■■□□ 2.06
CSNK1D-205ENST00000403276 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
CSNK1D-205ENST00000403276 GLI2P10070 1586 aa27.82■■■□□ 2.04
CSNK1D-205ENST00000403276 EPRSP07814 1512 aaKnown RBP27.81■■■□□ 2.04
CSNK1D-205ENST00000403276 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
CSNK1D-205ENST00000403276 UBTFP17480 764 aaKnown RBP27.78■■■□□ 2.04
CSNK1D-205ENST00000403276 PPRC1Q5VV67 1664 aaKnown RBP27.77■■■□□ 2.04
CSNK1D-205ENST00000403276 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.03
CSNK1D-205ENST00000403276 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
CSNK1D-205ENST00000403276 KDM6BO15054 1643 aa27.72■■■□□ 2.03
CSNK1D-205ENST00000403276 RAPGEF6Q8TEU7 1601 aa27.72■■■□□ 2.03
CSNK1D-205ENST00000403276 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
CSNK1D-205ENST00000403276 MAP3K4Q9Y6R4 1608 aa27.71■■■□□ 2.03
CSNK1D-205ENST00000403276 ATP10BO94823 1461 aa27.7■■■□□ 2.03
CSNK1D-205ENST00000403276 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
CSNK1D-205ENST00000403276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
CSNK1D-205ENST00000403276 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
CSNK1D-205ENST00000403276 NUP153P49790 1475 aaKnown RBP27.6■■■□□ 2.01
CSNK1D-205ENST00000403276 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
CSNK1D-205ENST00000403276 CD109Q6YHK3 1445 aa27.57■■■□□ 2
CSNK1D-205ENST00000403276 TEX14Q8IWB6 1497 aa27.56■■■□□ 2
CSNK1D-205ENST00000403276 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
CSNK1D-205ENST00000403276 COL17A1Q9UMD9 1497 aaPredicted RBP27.53■■■□□ 2
CSNK1D-205ENST00000403276 AEBP2Q6ZN18 517 aaPredicted RBP27.5■■□□□ 1.99
CSNK1D-205ENST00000403276 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
CSNK1D-205ENST00000403276 ATP1B4Q9UN42 357 aaPredicted RBP27.45■■□□□ 1.98
CSNK1D-205ENST00000403276 ABCA9Q8IUA7 1624 aa27.45■■□□□ 1.98
CSNK1D-205ENST00000403276 PLEKHD1A6NEE1 506 aa27.43■■□□□ 1.98
CSNK1D-205ENST00000403276 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
CSNK1D-205ENST00000403276 CDK13Q14004 1512 aaKnown RBP27.41■■□□□ 1.98
CSNK1D-205ENST00000403276 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
CSNK1D-205ENST00000403276 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
CSNK1D-205ENST00000403276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.28■■□□□ 1.96
CSNK1D-205ENST00000403276 KDM4FA0A1W2PPD8 638 aa27.28■■□□□ 1.96
CSNK1D-205ENST00000403276 ARAP3Q8WWN8 1544 aa27.26■■□□□ 1.96
CSNK1D-205ENST00000403276 CLIP1P30622 1438 aa27.26■■□□□ 1.95
CSNK1D-205ENST00000403276 TTC37Q6PGP7 1564 aa27.26■■□□□ 1.95
CSNK1D-205ENST00000403276 PCF11O94913 1555 aaKnown RBP27.23■■□□□ 1.95
CSNK1D-205ENST00000403276 NEO1Q92859 1461 aa27.22■■□□□ 1.95
CSNK1D-205ENST00000403276 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
CSNK1D-205ENST00000403276 RAPGEF3O95398 923 aa27.2■■□□□ 1.94
CSNK1D-205ENST00000403276 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
CSNK1D-205ENST00000403276 CASKIN1Q8WXD9 1431 aa27.19■■□□□ 1.94
CSNK1D-205ENST00000403276 KIF14Q15058 1648 aa27.16■■□□□ 1.94
CSNK1D-205ENST00000403276 FANCAO15360 1455 aa27.14■■□□□ 1.94
CSNK1D-205ENST00000403276 AKNAQ7Z591 1439 aa27.14■■□□□ 1.93
CSNK1D-205ENST00000403276 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
CSNK1D-205ENST00000403276 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
CSNK1D-205ENST00000403276 FRMPD1Q5SYB0 1578 aa27.11■■□□□ 1.93
CSNK1D-205ENST00000403276 CFAP74Q9C0B2 1584 aa27.11■■□□□ 1.93
CSNK1D-205ENST00000403276 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
CSNK1D-205ENST00000403276 MYO5CQ9NQX4 1742 aa27.1■■□□□ 1.93
CSNK1D-205ENST00000403276 FYCO1Q9BQS8 1478 aa27.1■■□□□ 1.93
CSNK1D-205ENST00000403276 PLCH2O75038 1416 aa27.09■■□□□ 1.93
CSNK1D-205ENST00000403276 CCDC18Q5T9S5 1454 aa27.09■■□□□ 1.93
CSNK1D-205ENST00000403276 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
CSNK1D-205ENST00000403276 CEP162Q5TB80 1403 aa27.07■■□□□ 1.92
CSNK1D-205ENST00000403276 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
CSNK1D-205ENST00000403276 EFCAB2Q5VUJ9 269 aa27.01■■□□□ 1.91
CSNK1D-205ENST00000403276 SCAPERQ9BY12 1400 aa26.99■■□□□ 1.91
CSNK1D-205ENST00000403276 CDC42BPBQ9Y5S2 1711 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms