RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KIAA0586Q9BVV6 1533 aa28.43■■■□□ 2.14
PTCHD3P3-201ENST00000403073 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
PTCHD3P3-201ENST00000403073 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
PTCHD3P3-201ENST00000403073 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
PTCHD3P3-201ENST00000403073 EHMT2Q96KQ7 1210 aa28.36■■■□□ 2.13
PTCHD3P3-201ENST00000403073 PRG4Q92954 1404 aaPredicted RBP28.31■■■□□ 2.12
PTCHD3P3-201ENST00000403073 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
PTCHD3P3-201ENST00000403073 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
PTCHD3P3-201ENST00000403073 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
PTCHD3P3-201ENST00000403073 KIF21BO75037 1637 aa28.26■■■□□ 2.11
PTCHD3P3-201ENST00000403073 IQGAP2Q13576 1575 aa28.25■■■□□ 2.11
PTCHD3P3-201ENST00000403073 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
PTCHD3P3-201ENST00000403073 UBTFP17480 764 aaKnown RBP28.2■■■□□ 2.1
PTCHD3P3-201ENST00000403073 GOLGA3Q08378 1498 aa28.18■■■□□ 2.1
PTCHD3P3-201ENST00000403073 CTTNBP2Q8WZ74 1663 aa28.15■■■□□ 2.1
PTCHD3P3-201ENST00000403073 UGGT2Q9NYU1 1516 aa28.13■■■□□ 2.09
PTCHD3P3-201ENST00000403073 CARMIL2Q6F5E8 1435 aa28.12■■■□□ 2.09
PTCHD3P3-201ENST00000403073 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
PTCHD3P3-201ENST00000403073 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
PTCHD3P3-201ENST00000403073 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
PTCHD3P3-201ENST00000403073 TNIKQ9UKE5 1360 aa28.03■■■□□ 2.08
PTCHD3P3-201ENST00000403073 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
PTCHD3P3-201ENST00000403073 PTPRGP23470 1445 aa28.02■■■□□ 2.08
PTCHD3P3-201ENST00000403073 KIAA0556O60303 1618 aa27.99■■■□□ 2.07
PTCHD3P3-201ENST00000403073 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
PTCHD3P3-201ENST00000403073 SAMD9Q5K651 1589 aa27.87■■■□□ 2.05
PTCHD3P3-201ENST00000403073 FHOD3Q2V2M9 1422 aa27.83■■■□□ 2.05
PTCHD3P3-201ENST00000403073 UACAQ9BZF9 1416 aa27.81■■■□□ 2.04
PTCHD3P3-201ENST00000403073 EFCAB5A4FU69 1503 aa27.8■■■□□ 2.04
PTCHD3P3-201ENST00000403073 ARHGAP35Q9NRY4 1499 aa27.78■■■□□ 2.04
PTCHD3P3-201ENST00000403073 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
PTCHD3P3-201ENST00000403073 ADCY10Q96PN6 1610 aa27.77■■■□□ 2.04
PTCHD3P3-201ENST00000403073 PLB1Q6P1J6 1458 aa27.76■■■□□ 2.04
PTCHD3P3-201ENST00000403073 UHRF1BP1LA0JNW5 1464 aa27.73■■■□□ 2.03
PTCHD3P3-201ENST00000403073 CLIP1P30622 1438 aa27.71■■■□□ 2.03
PTCHD3P3-201ENST00000403073 ABCC2Q92887 1545 aa27.7■■■□□ 2.02
PTCHD3P3-201ENST00000403073 ABCA8O94911 1581 aa27.69■■■□□ 2.02
PTCHD3P3-201ENST00000403073 CEP162Q5TB80 1403 aa27.65■■■□□ 2.02
PTCHD3P3-201ENST00000403073 ARID3CA6NKF2 412 aa27.64■■■□□ 2.02
PTCHD3P3-201ENST00000403073 TRHP20396 242 aaPredicted RBP27.62■■■□□ 2.01
PTCHD3P3-201ENST00000403073 KDM5BQ9UGL1 1544 aa27.6■■■□□ 2.01
PTCHD3P3-201ENST00000403073 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
PTCHD3P3-201ENST00000403073 RAPGEF6Q8TEU7 1601 aa27.56■■■□□ 2
PTCHD3P3-201ENST00000403073 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
PTCHD3P3-201ENST00000403073 MAPKBP1O60336 1514 aa27.53■■■□□ 2
PTCHD3P3-201ENST00000403073 ATP10BO94823 1461 aa27.53■■■□□ 2
PTCHD3P3-201ENST00000403073 NUP153P49790 1475 aaKnown RBP27.53■■■□□ 2
PTCHD3P3-201ENST00000403073 ASXL2Q76L83 1435 aa27.51■■□□□ 1.99
PTCHD3P3-201ENST00000403073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
PTCHD3P3-201ENST00000403073 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■□□□ 1.99
PTCHD3P3-201ENST00000403073 ZCCHC11Q5TAX3 1644 aaKnown RBP27.51■■□□□ 1.99
PTCHD3P3-201ENST00000403073 FAM69CQ0P6D2 419 aa27.45■■□□□ 1.98
PTCHD3P3-201ENST00000403073 CASKIN1Q8WXD9 1431 aa27.42■■□□□ 1.98
PTCHD3P3-201ENST00000403073 ABCC10Q5T3U5 1492 aa27.42■■□□□ 1.98
PTCHD3P3-201ENST00000403073 KCNH8Q96L42 1107 aa27.4■■□□□ 1.98
PTCHD3P3-201ENST00000403073 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
PTCHD3P3-201ENST00000403073 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
PTCHD3P3-201ENST00000403073 PCF11O94913 1555 aaKnown RBP27.37■■□□□ 1.97
PTCHD3P3-201ENST00000403073 EPRSP07814 1512 aaKnown RBP27.36■■□□□ 1.97
PTCHD3P3-201ENST00000403073 CDK13Q14004 1512 aaKnown RBP27.36■■□□□ 1.97
PTCHD3P3-201ENST00000403073 PLEKHD1A6NEE1 506 aa27.35■■□□□ 1.97
PTCHD3P3-201ENST00000403073 DIP2BQ9P265 1576 aa27.33■■□□□ 1.97
PTCHD3P3-201ENST00000403073 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
PTCHD3P3-201ENST00000403073 VPS8Q8N3P4 1428 aa27.28■■□□□ 1.96
PTCHD3P3-201ENST00000403073 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
PTCHD3P3-201ENST00000403073 KIF13AQ9H1H9 1805 aa27.25■■□□□ 1.95
PTCHD3P3-201ENST00000403073 GLI2P10070 1586 aa27.24■■□□□ 1.95
PTCHD3P3-201ENST00000403073 CCDC18Q5T9S5 1454 aa27.24■■□□□ 1.95
PTCHD3P3-201ENST00000403073 LRRIQ1Q96JM4 1722 aa27.22■■□□□ 1.95
PTCHD3P3-201ENST00000403073 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
PTCHD3P3-201ENST00000403073 CD109Q6YHK3 1445 aa27.15■■□□□ 1.94
PTCHD3P3-201ENST00000403073 MAGI3Q5TCQ9 1506 aa27.12■■□□□ 1.93
PTCHD3P3-201ENST00000403073 MAP3K4Q9Y6R4 1608 aa27.1■■□□□ 1.93
PTCHD3P3-201ENST00000403073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.06■■□□□ 1.92
PTCHD3P3-201ENST00000403073 ABCA9Q8IUA7 1624 aa27.06■■□□□ 1.92
PTCHD3P3-201ENST00000403073 MTUS2Q5JR59 1369 aa27.06■■□□□ 1.92
PTCHD3P3-201ENST00000403073 TSPOAP1O95153 1857 aa27.05■■□□□ 1.92
PTCHD3P3-201ENST00000403073 APLP2Q06481 763 aa27.03■■□□□ 1.92
PTCHD3P3-201ENST00000403073 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
PTCHD3P3-201ENST00000403073 KIF14Q15058 1648 aa27.02■■□□□ 1.92
PTCHD3P3-201ENST00000403073 PPRC1Q5VV67 1664 aaKnown RBP27.01■■□□□ 1.92
PTCHD3P3-201ENST00000403073 TIAM1Q13009 1591 aa27.01■■□□□ 1.91
PTCHD3P3-201ENST00000403073 KANK4Q5T7N3 995 aaPredicted RBP27■■□□□ 1.91
PTCHD3P3-201ENST00000403073 TTC37Q6PGP7 1564 aa27■■□□□ 1.91
PTCHD3P3-201ENST00000403073 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
PTCHD3P3-201ENST00000403073 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
PTCHD3P3-201ENST00000403073 PLCH2O75038 1416 aa26.95■■□□□ 1.9
PTCHD3P3-201ENST00000403073 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
PTCHD3P3-201ENST00000403073 EHBP1L1Q8N3D4 1523 aa26.93■■□□□ 1.9
PTCHD3P3-201ENST00000403073 EFCAB2Q5VUJ9 269 aa26.88■■□□□ 1.89
PTCHD3P3-201ENST00000403073 FANCAO15360 1455 aa26.87■■□□□ 1.89
PTCHD3P3-201ENST00000403073 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
PTCHD3P3-201ENST00000403073 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
PTCHD3P3-201ENST00000403073 NEO1Q92859 1461 aa26.86■■□□□ 1.89
PTCHD3P3-201ENST00000403073 PHLDB1Q86UU1 1377 aa26.84■■□□□ 1.89
PTCHD3P3-201ENST00000403073 NCOA2Q15596 1464 aa26.84■■□□□ 1.89
PTCHD3P3-201ENST00000403073 GPATCH8Q9UKJ3 1502 aaKnown RBP26.84■■□□□ 1.89
PTCHD3P3-201ENST00000403073 KDM6BO15054 1643 aa26.83■■□□□ 1.89
PTCHD3P3-201ENST00000403073 AKNAQ7Z591 1439 aa26.83■■□□□ 1.89
PTCHD3P3-201ENST00000403073 ARHGAP5Q13017 1502 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms