RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NISCHQ9Y2I1 1504 aa41.14■■■■■ 4.18
PTCHD3P3-201ENST00000403073 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
PTCHD3P3-201ENST00000403073 ABCC9O60706 1549 aa35.49■■■■□ 3.27
PTCHD3P3-201ENST00000403073 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
PTCHD3P3-201ENST00000403073 ZCCHC6Q5VYS8 1495 aaKnown RBP34.3■■■■□ 3.08
PTCHD3P3-201ENST00000403073 NACADO15069 1562 aa34.16■■■■□ 3.06
PTCHD3P3-201ENST00000403073 RB1CC1Q8TDY2 1594 aa34.14■■■■□ 3.06
PTCHD3P3-201ENST00000403073 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
PTCHD3P3-201ENST00000403073 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
PTCHD3P3-201ENST00000403073 PABPN1Q86U42 306 aaKnown RBP eCLIP33.3■■■□□ 2.92
PTCHD3P3-201ENST00000403073 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
PTCHD3P3-201ENST00000403073 UNC13AQ9UPW8 1703 aa33.27■■■□□ 2.92
PTCHD3P3-201ENST00000403073 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
PTCHD3P3-201ENST00000403073 SHROOM4Q9ULL8 1493 aa32.81■■■□□ 2.84
PTCHD3P3-201ENST00000403073 DNAJC5BQ9UF47 199 aa32.43■■■□□ 2.78
PTCHD3P3-201ENST00000403073 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
PTCHD3P3-201ENST00000403073 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
PTCHD3P3-201ENST00000403073 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
PTCHD3P3-201ENST00000403073 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
PTCHD3P3-201ENST00000403073 SMARCA4P51532 1647 aa31.82■■■□□ 2.69
PTCHD3P3-201ENST00000403073 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
PTCHD3P3-201ENST00000403073 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
PTCHD3P3-201ENST00000403073 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
PTCHD3P3-201ENST00000403073 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
PTCHD3P3-201ENST00000403073 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
PTCHD3P3-201ENST00000403073 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
PTCHD3P3-201ENST00000403073 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
PTCHD3P3-201ENST00000403073 WIZO95785 1651 aa31.38■■■□□ 2.61
PTCHD3P3-201ENST00000403073 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
PTCHD3P3-201ENST00000403073 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
PTCHD3P3-201ENST00000403073 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
PTCHD3P3-201ENST00000403073 NESP48681 1621 aa30.79■■■□□ 2.52
PTCHD3P3-201ENST00000403073 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.52
PTCHD3P3-201ENST00000403073 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
PTCHD3P3-201ENST00000403073 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
PTCHD3P3-201ENST00000403073 CFTRP13569 1480 aa30.55■■■□□ 2.48
PTCHD3P3-201ENST00000403073 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
PTCHD3P3-201ENST00000403073 PDS5BQ9NTI5 1447 aa30.5■■■□□ 2.47
PTCHD3P3-201ENST00000403073 FANCD2Q9BXW9 1451 aa30.33■■■□□ 2.45
PTCHD3P3-201ENST00000403073 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
PTCHD3P3-201ENST00000403073 CEP164Q9UPV0 1460 aa30.25■■■□□ 2.43
PTCHD3P3-201ENST00000403073 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
PTCHD3P3-201ENST00000403073 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
PTCHD3P3-201ENST00000403073 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
PTCHD3P3-201ENST00000403073 CUX2O14529 1486 aa30.05■■■□□ 2.4
PTCHD3P3-201ENST00000403073 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.4
PTCHD3P3-201ENST00000403073 WDR62O43379 1518 aa30.01■■■□□ 2.39
PTCHD3P3-201ENST00000403073 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
PTCHD3P3-201ENST00000403073 ABCC8Q09428 1581 aa29.84■■■□□ 2.37
PTCHD3P3-201ENST00000403073 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
PTCHD3P3-201ENST00000403073 CUX1P39880 1505 aa29.76■■■□□ 2.35
PTCHD3P3-201ENST00000403073 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
PTCHD3P3-201ENST00000403073 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
PTCHD3P3-201ENST00000403073 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
PTCHD3P3-201ENST00000403073 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
PTCHD3P3-201ENST00000403073 SOGA1O94964 1423 aa29.57■■■□□ 2.32
PTCHD3P3-201ENST00000403073 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
PTCHD3P3-201ENST00000403073 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
PTCHD3P3-201ENST00000403073 TOP2BQ02880 1626 aa29.51■■■□□ 2.31
PTCHD3P3-201ENST00000403073 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
PTCHD3P3-201ENST00000403073 TARBP1Q13395 1621 aaKnown RBP29.48■■■□□ 2.31
PTCHD3P3-201ENST00000403073 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
PTCHD3P3-201ENST00000403073 TDRD9Q8NDG6 1382 aaKnown RBP29.41■■■□□ 2.3
PTCHD3P3-201ENST00000403073 AQRO60306 1485 aaKnown RBP eCLIP29.4■■■□□ 2.3
PTCHD3P3-201ENST00000403073 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
PTCHD3P3-201ENST00000403073 EIF4G3O43432 1585 aaKnown RBP29.3■■■□□ 2.28
PTCHD3P3-201ENST00000403073 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
PTCHD3P3-201ENST00000403073 WDR97A6NE52 1622 aa29.23■■■□□ 2.27
PTCHD3P3-201ENST00000403073 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
PTCHD3P3-201ENST00000403073 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
PTCHD3P3-201ENST00000403073 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
PTCHD3P3-201ENST00000403073 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
PTCHD3P3-201ENST00000403073 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
PTCHD3P3-201ENST00000403073 FBLN2P98095 1184 aa29.05■■■□□ 2.24
PTCHD3P3-201ENST00000403073 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
PTCHD3P3-201ENST00000403073 MAGI1Q96QZ7 1491 aaPredicted RBP29■■■□□ 2.23
PTCHD3P3-201ENST00000403073 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
PTCHD3P3-201ENST00000403073 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
PTCHD3P3-201ENST00000403073 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
PTCHD3P3-201ENST00000403073 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
PTCHD3P3-201ENST00000403073 IGF1RP08069 1367 aa28.94■■■□□ 2.22
PTCHD3P3-201ENST00000403073 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
PTCHD3P3-201ENST00000403073 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
PTCHD3P3-201ENST00000403073 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
PTCHD3P3-201ENST00000403073 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
PTCHD3P3-201ENST00000403073 CHD1O14646 1710 aa28.84■■■□□ 2.21
PTCHD3P3-201ENST00000403073 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
PTCHD3P3-201ENST00000403073 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
PTCHD3P3-201ENST00000403073 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
PTCHD3P3-201ENST00000403073 FAM9AQ8IZU1 332 aaPredicted RBP28.71■■■□□ 2.19
PTCHD3P3-201ENST00000403073 CUL7Q14999 1698 aa28.68■■■□□ 2.18
PTCHD3P3-201ENST00000403073 CSRNP3Q8WYN3 585 aa28.67■■■□□ 2.18
PTCHD3P3-201ENST00000403073 NUP160Q12769 1436 aa28.62■■■□□ 2.17
PTCHD3P3-201ENST00000403073 EEA1Q15075 1411 aa28.61■■■□□ 2.17
PTCHD3P3-201ENST00000403073 CEP170Q5SW79 1584 aa28.59■■■□□ 2.17
PTCHD3P3-201ENST00000403073 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
PTCHD3P3-201ENST00000403073 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.17
PTCHD3P3-201ENST00000403073 PRXQ9BXM0 1461 aa28.54■■■□□ 2.16
PTCHD3P3-201ENST00000403073 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
PTCHD3P3-201ENST00000403073 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms