RNA–Protein interactions for RNA: ENST00000402849.5

SNRPD3-202, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 2 BASIC

Gene SNRPD3, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-202ENST00000402849 KIF21BO75037 1637 aa12.01□□□□□ -0.49
SNRPD3-202ENST00000402849 GOLGA3Q08378 1498 aa12.01□□□□□ -0.49
SNRPD3-202ENST00000402849 JPH4Q96JJ6 628 aa11.98□□□□□ -0.49
SNRPD3-202ENST00000402849 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
SNRPD3-202ENST00000402849 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
SNRPD3-202ENST00000402849 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
SNRPD3-202ENST00000402849 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
SNRPD3-202ENST00000402849 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
SNRPD3-202ENST00000402849 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
SNRPD3-202ENST00000402849 PRG4Q92954 1404 aaPredicted RBP11.92□□□□□ -0.5
SNRPD3-202ENST00000402849 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
SNRPD3-202ENST00000402849 ERCC6L2Q5T890 1561 aa11.91□□□□□ -0.5
SNRPD3-202ENST00000402849 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
SNRPD3-202ENST00000402849 SHROOM2Q13796 1616 aa11.87□□□□□ -0.51
SNRPD3-202ENST00000402849 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
SNRPD3-202ENST00000402849 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
SNRPD3-202ENST00000402849 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
SNRPD3-202ENST00000402849 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
SNRPD3-202ENST00000402849 CYB5RLQ6IPT4 315 aa11.84□□□□□ -0.51
SNRPD3-202ENST00000402849 CEP162Q5TB80 1403 aa11.84□□□□□ -0.51
SNRPD3-202ENST00000402849 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
SNRPD3-202ENST00000402849 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
SNRPD3-202ENST00000402849 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
SNRPD3-202ENST00000402849 CLIP1P30622 1438 aa11.83□□□□□ -0.52
SNRPD3-202ENST00000402849 FHOD3Q2V2M9 1422 aa11.83□□□□□ -0.52
SNRPD3-202ENST00000402849 ARHGAP35Q9NRY4 1499 aa11.82□□□□□ -0.52
SNRPD3-202ENST00000402849 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
SNRPD3-202ENST00000402849 PTPRGP23470 1445 aa11.8□□□□□ -0.52
SNRPD3-202ENST00000402849 ARAP1Q96P48 1450 aa11.8□□□□□ -0.52
SNRPD3-202ENST00000402849 SAMD9Q5K651 1589 aa11.79□□□□□ -0.52
SNRPD3-202ENST00000402849 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
SNRPD3-202ENST00000402849 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
SNRPD3-202ENST00000402849 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.53
SNRPD3-202ENST00000402849 PLB1Q6P1J6 1458 aa11.74□□□□□ -0.53
SNRPD3-202ENST00000402849 UACAQ9BZF9 1416 aa11.71□□□□□ -0.53
SNRPD3-202ENST00000402849 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
SNRPD3-202ENST00000402849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
SNRPD3-202ENST00000402849 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
SNRPD3-202ENST00000402849 ABCA8O94911 1581 aa11.67□□□□□ -0.54
SNRPD3-202ENST00000402849 ADCY10Q96PN6 1610 aa11.67□□□□□ -0.54
SNRPD3-202ENST00000402849 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRPD3-202ENST00000402849 ABCC2Q92887 1545 aa11.65□□□□□ -0.54
SNRPD3-202ENST00000402849 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.54
SNRPD3-202ENST00000402849 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
SNRPD3-202ENST00000402849 NUP153P49790 1475 aaKnown RBP11.64□□□□□ -0.55
SNRPD3-202ENST00000402849 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
SNRPD3-202ENST00000402849 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
SNRPD3-202ENST00000402849 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
SNRPD3-202ENST00000402849 ATP10BO94823 1461 aa11.63□□□□□ -0.55
SNRPD3-202ENST00000402849 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
SNRPD3-202ENST00000402849 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
SNRPD3-202ENST00000402849 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
SNRPD3-202ENST00000402849 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
SNRPD3-202ENST00000402849 KDM5BQ9UGL1 1544 aa11.6□□□□□ -0.55
SNRPD3-202ENST00000402849 KCNH8Q96L42 1107 aa11.59□□□□□ -0.55
SNRPD3-202ENST00000402849 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
SNRPD3-202ENST00000402849 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.56
SNRPD3-202ENST00000402849 APLP2Q06481 763 aa11.57□□□□□ -0.56
SNRPD3-202ENST00000402849 ASXL2Q76L83 1435 aa11.57□□□□□ -0.56
SNRPD3-202ENST00000402849 LRRIQ1Q96JM4 1722 aa11.57□□□□□ -0.56
SNRPD3-202ENST00000402849 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
SNRPD3-202ENST00000402849 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
SNRPD3-202ENST00000402849 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
SNRPD3-202ENST00000402849 TRHP20396 242 aaPredicted RBP11.54□□□□□ -0.56
SNRPD3-202ENST00000402849 CDK11AQ9UQ88 783 aaPredicted RBP11.54□□□□□ -0.56
SNRPD3-202ENST00000402849 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
SNRPD3-202ENST00000402849 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
SNRPD3-202ENST00000402849 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
SNRPD3-202ENST00000402849 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
SNRPD3-202ENST00000402849 MTUS2Q5JR59 1369 aa11.51□□□□□ -0.57
SNRPD3-202ENST00000402849 MAPKBP1O60336 1514 aa11.5□□□□□ -0.57
SNRPD3-202ENST00000402849 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
SNRPD3-202ENST00000402849 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
SNRPD3-202ENST00000402849 LRRC9Q6ZRR7 1453 aa11.47□□□□□ -0.57
SNRPD3-202ENST00000402849 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.57
SNRPD3-202ENST00000402849 ABCC10Q5T3U5 1492 aa11.46□□□□□ -0.57
SNRPD3-202ENST00000402849 KIF14Q15058 1648 aa11.46□□□□□ -0.58
SNRPD3-202ENST00000402849 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
SNRPD3-202ENST00000402849 DIP2BQ9P265 1576 aa11.44□□□□□ -0.58
SNRPD3-202ENST00000402849 EHBP1L1Q8N3D4 1523 aa11.43□□□□□ -0.58
SNRPD3-202ENST00000402849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■■■□ 23.4
SNRPD3-202ENST00000402849 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
SNRPD3-202ENST00000402849 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
SNRPD3-202ENST00000402849 NCOA2Q15596 1464 aa11.41□□□□□ -0.58
SNRPD3-202ENST00000402849 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
SNRPD3-202ENST00000402849 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
SNRPD3-202ENST00000402849 GLI2P10070 1586 aa11.39□□□□□ -0.59
SNRPD3-202ENST00000402849 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
SNRPD3-202ENST00000402849 PHLDB1Q86UU1 1377 aa11.39□□□□□ -0.59
SNRPD3-202ENST00000402849 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
SNRPD3-202ENST00000402849 ABCA9Q8IUA7 1624 aa11.38□□□□□ -0.59
SNRPD3-202ENST00000402849 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
SNRPD3-202ENST00000402849 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
SNRPD3-202ENST00000402849 TSPOAP1O95153 1857 aa11.37□□□□□ -0.59
SNRPD3-202ENST00000402849 ZNF644Q9H582 1327 aaPredicted RBP11.36□□□□□ -0.59
SNRPD3-202ENST00000402849 PLCH2O75038 1416 aa11.36□□□□□ -0.59
SNRPD3-202ENST00000402849 MAP3K4Q9Y6R4 1608 aa11.36□□□□□ -0.59
SNRPD3-202ENST00000402849 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
SNRPD3-202ENST00000402849 EFCAB2Q5VUJ9 269 aa11.35□□□□□ -0.59
SNRPD3-202ENST00000402849 FANCAO15360 1455 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms