RNA–Protein interactions for RNA: ENST00000402849.5

SNRPD3-202, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 2 BASIC

Gene SNRPD3, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-202ENST00000402849 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
SNRPD3-202ENST00000402849 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
SNRPD3-202ENST00000402849 ABCC9O60706 1549 aa14.89□□□□□ -0.03
SNRPD3-202ENST00000402849 DCAF8L2P0C7V8 631 aa14.62□□□□□ -0.07
SNRPD3-202ENST00000402849 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
SNRPD3-202ENST00000402849 NACADO15069 1562 aa14.32□□□□□ -0.12
SNRPD3-202ENST00000402849 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
SNRPD3-202ENST00000402849 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
SNRPD3-202ENST00000402849 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
SNRPD3-202ENST00000402849 SCRIBQ14160 1630 aa14.07□□□□□ -0.16
SNRPD3-202ENST00000402849 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
SNRPD3-202ENST00000402849 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
SNRPD3-202ENST00000402849 UNC13AQ9UPW8 1703 aa13.96□□□□□ -0.17
SNRPD3-202ENST00000402849 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
SNRPD3-202ENST00000402849 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
SNRPD3-202ENST00000402849 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
SNRPD3-202ENST00000402849 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
SNRPD3-202ENST00000402849 MROH2BQ7Z745 1585 aa13.44□□□□□ -0.26
SNRPD3-202ENST00000402849 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
SNRPD3-202ENST00000402849 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
SNRPD3-202ENST00000402849 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
SNRPD3-202ENST00000402849 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
SNRPD3-202ENST00000402849 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
SNRPD3-202ENST00000402849 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
SNRPD3-202ENST00000402849 WIZO95785 1651 aa13.29□□□□□ -0.28
SNRPD3-202ENST00000402849 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
SNRPD3-202ENST00000402849 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
SNRPD3-202ENST00000402849 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
SNRPD3-202ENST00000402849 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
SNRPD3-202ENST00000402849 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
SNRPD3-202ENST00000402849 TOP2AP11388 1531 aaKnown RBP13.12□□□□□ -0.31
SNRPD3-202ENST00000402849 CCDC88BA6NC98 1476 aa13.03□□□□□ -0.32
SNRPD3-202ENST00000402849 NESP48681 1621 aa12.95□□□□□ -0.34
SNRPD3-202ENST00000402849 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
SNRPD3-202ENST00000402849 CFTRP13569 1480 aa12.85□□□□□ -0.35
SNRPD3-202ENST00000402849 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
SNRPD3-202ENST00000402849 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
SNRPD3-202ENST00000402849 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
SNRPD3-202ENST00000402849 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
SNRPD3-202ENST00000402849 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
SNRPD3-202ENST00000402849 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
SNRPD3-202ENST00000402849 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
SNRPD3-202ENST00000402849 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
SNRPD3-202ENST00000402849 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
SNRPD3-202ENST00000402849 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
SNRPD3-202ENST00000402849 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
SNRPD3-202ENST00000402849 CUX1P39880 1505 aa12.58□□□□□ -0.4
SNRPD3-202ENST00000402849 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
SNRPD3-202ENST00000402849 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SNRPD3-202ENST00000402849 WDR62O43379 1518 aa12.56□□□□□ -0.4
SNRPD3-202ENST00000402849 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
SNRPD3-202ENST00000402849 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
SNRPD3-202ENST00000402849 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
SNRPD3-202ENST00000402849 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
SNRPD3-202ENST00000402849 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
SNRPD3-202ENST00000402849 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
SNRPD3-202ENST00000402849 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
SNRPD3-202ENST00000402849 CUX2O14529 1486 aa12.48□□□□□ -0.41
SNRPD3-202ENST00000402849 POLA1P09884 1462 aaPredicted RBP12.48□□□□□ -0.41
SNRPD3-202ENST00000402849 SOGA1O94964 1423 aa12.47□□□□□ -0.41
SNRPD3-202ENST00000402849 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
SNRPD3-202ENST00000402849 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
SNRPD3-202ENST00000402849 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
SNRPD3-202ENST00000402849 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
SNRPD3-202ENST00000402849 TARBP1Q13395 1621 aaKnown RBP12.39□□□□□ -0.43
SNRPD3-202ENST00000402849 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■□□ 18.1
SNRPD3-202ENST00000402849 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
SNRPD3-202ENST00000402849 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
SNRPD3-202ENST00000402849 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
SNRPD3-202ENST00000402849 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
SNRPD3-202ENST00000402849 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
SNRPD3-202ENST00000402849 WDR97A6NE52 1622 aa12.3□□□□□ -0.44
SNRPD3-202ENST00000402849 KIF27Q86VH2 1401 aa12.29□□□□□ -0.44
SNRPD3-202ENST00000402849 ABCA5Q8WWZ7 1642 aa12.26□□□□□ -0.45
SNRPD3-202ENST00000402849 FBLN2P98095 1184 aa12.26□□□□□ -0.45
SNRPD3-202ENST00000402849 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
SNRPD3-202ENST00000402849 IGF1RP08069 1367 aa12.25□□□□□ -0.45
SNRPD3-202ENST00000402849 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
SNRPD3-202ENST00000402849 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
SNRPD3-202ENST00000402849 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
SNRPD3-202ENST00000402849 PBRM1Q86U86 1689 aa12.21□□□□□ -0.45
SNRPD3-202ENST00000402849 CHMP7Q8WUX9 453 aaPredicted RBP12.2□□□□□ -0.46
SNRPD3-202ENST00000402849 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
SNRPD3-202ENST00000402849 CARMIL1Q5VZK9 1371 aa12.18□□□□□ -0.46
SNRPD3-202ENST00000402849 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
SNRPD3-202ENST00000402849 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
SNRPD3-202ENST00000402849 EEA1Q15075 1411 aa12.15□□□□□ -0.46
SNRPD3-202ENST00000402849 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
SNRPD3-202ENST00000402849 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
SNRPD3-202ENST00000402849 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
SNRPD3-202ENST00000402849 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
SNRPD3-202ENST00000402849 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
SNRPD3-202ENST00000402849 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
SNRPD3-202ENST00000402849 CHD1O14646 1710 aa12.1□□□□□ -0.47
SNRPD3-202ENST00000402849 CUL7Q14999 1698 aa12.1□□□□□ -0.47
SNRPD3-202ENST00000402849 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
SNRPD3-202ENST00000402849 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
SNRPD3-202ENST00000402849 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
SNRPD3-202ENST00000402849 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
SNRPD3-202ENST00000402849 NUP160Q12769 1436 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms