RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FAM69CQ0P6D2 419 aa32.74■■■□□ 2.83
UFD1-202ENST00000399523 MAPKBP1O60336 1514 aa32.67■■■□□ 2.82
UFD1-202ENST00000399523 NPM1P06748 294 aaKnown RBP eCLIP32.66■■■□□ 2.82
UFD1-202ENST00000399523 DIP2BQ9P265 1576 aa32.62■■■□□ 2.81
UFD1-202ENST00000399523 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
UFD1-202ENST00000399523 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
UFD1-202ENST00000399523 ADCY10Q96PN6 1610 aa32.56■■■□□ 2.8
UFD1-202ENST00000399523 KDM4FA0A1W2PPD8 638 aa32.56■■■□□ 2.8
UFD1-202ENST00000399523 KDM6BO15054 1643 aa32.51■■■□□ 2.79
UFD1-202ENST00000399523 KIAA0586Q9BVV6 1533 aa32.41■■■□□ 2.78
UFD1-202ENST00000399523 TSPOAP1O95153 1857 aa32.4■■■□□ 2.78
UFD1-202ENST00000399523 IGF1RP08069 1367 aa32.3■■■□□ 2.76
UFD1-202ENST00000399523 ILDR1Q86SU0 546 aaPredicted RBP32.29■■■□□ 2.76
UFD1-202ENST00000399523 PTPRGP23470 1445 aa32.25■■■□□ 2.75
UFD1-202ENST00000399523 CUL7Q14999 1698 aa32.21■■■□□ 2.75
UFD1-202ENST00000399523 ABCC2Q92887 1545 aa32.17■■■□□ 2.74
UFD1-202ENST00000399523 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
UFD1-202ENST00000399523 GLI2P10070 1586 aa32.15■■■□□ 2.74
UFD1-202ENST00000399523 PPRC1Q5VV67 1664 aaKnown RBP32.14■■■□□ 2.74
UFD1-202ENST00000399523 PLB1Q6P1J6 1458 aa32.13■■■□□ 2.73
UFD1-202ENST00000399523 ASXL2Q76L83 1435 aa32.13■■■□□ 2.73
UFD1-202ENST00000399523 TNIKQ9UKE5 1360 aa32.12■■■□□ 2.73
UFD1-202ENST00000399523 CARMIL2Q6F5E8 1435 aa32.09■■■□□ 2.73
UFD1-202ENST00000399523 ADGRL1O94910 1474 aa32.09■■■□□ 2.73
UFD1-202ENST00000399523 TTBK1Q5TCY1 1321 aaPredicted RBP32.07■■■□□ 2.72
UFD1-202ENST00000399523 UHRF1BP1LA0JNW5 1464 aa32.05■■■□□ 2.72
UFD1-202ENST00000399523 CARMIL1Q5VZK9 1371 aa32.04■■■□□ 2.72
UFD1-202ENST00000399523 COL17A1Q9UMD9 1497 aaPredicted RBP32.01■■■□□ 2.71
UFD1-202ENST00000399523 UACAQ9BZF9 1416 aa31.98■■■□□ 2.71
UFD1-202ENST00000399523 IQGAP2Q13576 1575 aa31.95■■■□□ 2.71
UFD1-202ENST00000399523 EPRSP07814 1512 aaKnown RBP31.93■■■□□ 2.7
UFD1-202ENST00000399523 MAP3K4Q9Y6R4 1608 aa31.92■■■□□ 2.7
UFD1-202ENST00000399523 KDM5BQ9UGL1 1544 aa31.91■■■□□ 2.7
UFD1-202ENST00000399523 DISP1Q96F81 1524 aa31.9■■■□□ 2.7
UFD1-202ENST00000399523 TEX14Q8IWB6 1497 aa31.89■■■□□ 2.7
UFD1-202ENST00000399523 HECW2Q9P2P5 1572 aa31.87■■■□□ 2.69
UFD1-202ENST00000399523 ZCCHC11Q5TAX3 1644 aaKnown RBP31.78■■■□□ 2.68
UFD1-202ENST00000399523 UGGT2Q9NYU1 1516 aa31.76■■■□□ 2.68
UFD1-202ENST00000399523 WDR7Q9Y4E6 1490 aa31.69■■■□□ 2.66
UFD1-202ENST00000399523 KIAA0556O60303 1618 aa31.67■■■□□ 2.66
UFD1-202ENST00000399523 RAPGEF2Q9Y4G8 1499 aa31.65■■■□□ 2.66
UFD1-202ENST00000399523 MAGI3Q5TCQ9 1506 aa31.61■■■□□ 2.65
UFD1-202ENST00000399523 CD109Q6YHK3 1445 aa31.58■■■□□ 2.65
UFD1-202ENST00000399523 CFAP43Q8NDM7 1665 aa31.55■■■□□ 2.64
UFD1-202ENST00000399523 KCNH8Q96L42 1107 aa31.49■■■□□ 2.63
UFD1-202ENST00000399523 ABCA8O94911 1581 aa31.47■■■□□ 2.63
UFD1-202ENST00000399523 FBXO41Q8TF61 875 aa31.45■■■□□ 2.63
UFD1-202ENST00000399523 KIF21BO75037 1637 aa31.43■■■□□ 2.62
UFD1-202ENST00000399523 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
UFD1-202ENST00000399523 ARAP3Q8WWN8 1544 aa31.4■■■□□ 2.62
UFD1-202ENST00000399523 CTTNBP2Q8WZ74 1663 aa31.39■■■□□ 2.62
UFD1-202ENST00000399523 PTPRMP28827 1452 aa31.28■■■□□ 2.6
UFD1-202ENST00000399523 ADAMTSL3P82987 1691 aa31.28■■■□□ 2.6
UFD1-202ENST00000399523 PHLDB1Q86UU1 1377 aa31.27■■■□□ 2.6
UFD1-202ENST00000399523 ATP10BO94823 1461 aa31.21■■■□□ 2.59
UFD1-202ENST00000399523 ABCA9Q8IUA7 1624 aa31.19■■■□□ 2.58
UFD1-202ENST00000399523 PRXQ9BXM0 1461 aa31.16■■■□□ 2.58
UFD1-202ENST00000399523 RAPGEF3O95398 923 aa31.16■■■□□ 2.58
UFD1-202ENST00000399523 ARID3CA6NKF2 412 aa31.14■■■□□ 2.58
UFD1-202ENST00000399523 FAM9AQ8IZU1 332 aaPredicted RBP31.14■■■□□ 2.58
UFD1-202ENST00000399523 NEO1Q92859 1461 aa31.12■■■□□ 2.57
UFD1-202ENST00000399523 BCORL1Q5H9F3 1711 aa31.12■■■□□ 2.57
UFD1-202ENST00000399523 PCF11O94913 1555 aaKnown RBP31.1■■■□□ 2.57
UFD1-202ENST00000399523 LMTK3Q96Q04 1460 aa31.08■■■□□ 2.57
UFD1-202ENST00000399523 MADDQ8WXG6 1647 aa31.06■■■□□ 2.56
UFD1-202ENST00000399523 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
UFD1-202ENST00000399523 FRMPD1Q5SYB0 1578 aa31.05■■■□□ 2.56
UFD1-202ENST00000399523 ARID4BQ4LE39 1312 aaPredicted RBP31.03■■■□□ 2.56
UFD1-202ENST00000399523 RAPGEF6Q8TEU7 1601 aa30.95■■■□□ 2.55
UFD1-202ENST00000399523 SAMD9Q5K651 1589 aa30.93■■■□□ 2.54
UFD1-202ENST00000399523 ARHGEF40Q8TER5 1519 aa30.93■■■□□ 2.54
UFD1-202ENST00000399523 RIMS1Q86UR5 1692 aaKnown RBP30.91■■■□□ 2.54
UFD1-202ENST00000399523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.9■■■□□ 2.54
UFD1-202ENST00000399523 HNRNPUL2Q1KMD3 747 aaKnown RBP30.9■■■□□ 2.54
UFD1-202ENST00000399523 DENND4BO75064 1496 aaPredicted RBP30.88■■■□□ 2.53
UFD1-202ENST00000399523 NUP153P49790 1475 aaKnown RBP30.87■■■□□ 2.53
UFD1-202ENST00000399523 RICTORQ6R327 1708 aa30.87■■■□□ 2.53
UFD1-202ENST00000399523 HSPA2P54652 639 aa30.86■■■□□ 2.53
UFD1-202ENST00000399523 FHOD3Q2V2M9 1422 aa30.86■■■□□ 2.53
UFD1-202ENST00000399523 AKNAQ7Z591 1439 aa30.83■■■□□ 2.53
UFD1-202ENST00000399523 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
UFD1-202ENST00000399523 CERKQ8TCT0 537 aa30.79■■■□□ 2.52
UFD1-202ENST00000399523 FANCAO15360 1455 aa30.78■■■□□ 2.52
UFD1-202ENST00000399523 PLEKHD1A6NEE1 506 aa30.77■■■□□ 2.52
UFD1-202ENST00000399523 ZMYM4Q5VZL5 1548 aa30.77■■■□□ 2.52
UFD1-202ENST00000399523 CFAP74Q9C0B2 1584 aa30.75■■■□□ 2.51
UFD1-202ENST00000399523 SIGLEC1Q9BZZ2 1709 aa30.73■■■□□ 2.51
UFD1-202ENST00000399523 CSRNP3Q8WYN3 585 aa30.72■■■□□ 2.51
UFD1-202ENST00000399523 ZFYVE16Q7Z3T8 1539 aa30.72■■■□□ 2.51
UFD1-202ENST00000399523 YEATS2Q9ULM3 1422 aa30.72■■■□□ 2.51
UFD1-202ENST00000399523 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
UFD1-202ENST00000399523 PLPPR3Q6T4P5 718 aa30.71■■■□□ 2.51
UFD1-202ENST00000399523 EFCAB5A4FU69 1503 aa30.71■■■□□ 2.51
UFD1-202ENST00000399523 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.51
UFD1-202ENST00000399523 TTC37Q6PGP7 1564 aa30.65■■■□□ 2.5
UFD1-202ENST00000399523 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.49
UFD1-202ENST00000399523 HECW1Q76N89 1606 aa30.62■■■□□ 2.49
UFD1-202ENST00000399523 MLECQ14165 292 aa30.62■■■□□ 2.49
UFD1-202ENST00000399523 RANGAP1P46060 587 aaPredicted RBP30.58■■■□□ 2.49
UFD1-202ENST00000399523 ARHGEF12Q9NZN5 1544 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms