RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 PRG4Q92954 1404 aaPredicted RBP32.43■■■□□ 2.78
GPM6B-204ENST00000398361 JPH4Q96JJ6 628 aa32.41■■■□□ 2.78
GPM6B-204ENST00000398361 KIAA0586Q9BVV6 1533 aa32.31■■■□□ 2.76
GPM6B-204ENST00000398361 CARMIL1Q5VZK9 1371 aa32.27■■■□□ 2.76
GPM6B-204ENST00000398361 AEBP2Q6ZN18 517 aaPredicted RBP32.22■■■□□ 2.75
GPM6B-204ENST00000398361 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
GPM6B-204ENST00000398361 KIF13AQ9H1H9 1805 aa32.11■■■□□ 2.73
GPM6B-204ENST00000398361 ADCY10Q96PN6 1610 aa32.08■■■□□ 2.73
GPM6B-204ENST00000398361 IQGAP2Q13576 1575 aa32.08■■■□□ 2.73
GPM6B-204ENST00000398361 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
GPM6B-204ENST00000398361 NPM1P06748 294 aaKnown RBP eCLIP32.04■■■□□ 2.72
GPM6B-204ENST00000398361 EEA1Q15075 1411 aa32■■■□□ 2.71
GPM6B-204ENST00000398361 CARMIL2Q6F5E8 1435 aa32■■■□□ 2.71
GPM6B-204ENST00000398361 MAPKBP1O60336 1514 aa31.99■■■□□ 2.71
GPM6B-204ENST00000398361 PRXQ9BXM0 1461 aa31.97■■■□□ 2.71
GPM6B-204ENST00000398361 PTPRGP23470 1445 aa31.96■■■□□ 2.71
GPM6B-204ENST00000398361 CSRNP3Q8WYN3 585 aa31.94■■■□□ 2.7
GPM6B-204ENST00000398361 TNIKQ9UKE5 1360 aa31.94■■■□□ 2.7
GPM6B-204ENST00000398361 ABCC10Q5T3U5 1492 aa31.91■■■□□ 2.7
GPM6B-204ENST00000398361 TTBK1Q5TCY1 1321 aaPredicted RBP31.88■■■□□ 2.69
GPM6B-204ENST00000398361 CTTNBP2Q8WZ74 1663 aa31.88■■■□□ 2.69
GPM6B-204ENST00000398361 DIP2BQ9P265 1576 aa31.87■■■□□ 2.69
GPM6B-204ENST00000398361 UGGT2Q9NYU1 1516 aa31.86■■■□□ 2.69
GPM6B-204ENST00000398361 DISP1Q96F81 1524 aa31.85■■■□□ 2.69
GPM6B-204ENST00000398361 FAM69CQ0P6D2 419 aa31.85■■■□□ 2.69
GPM6B-204ENST00000398361 FAM9AQ8IZU1 332 aaPredicted RBP31.82■■■□□ 2.68
GPM6B-204ENST00000398361 KIAA0556O60303 1618 aa31.78■■■□□ 2.68
GPM6B-204ENST00000398361 ABCC2Q92887 1545 aa31.78■■■□□ 2.68
GPM6B-204ENST00000398361 UHRF1BP1LA0JNW5 1464 aa31.75■■■□□ 2.67
GPM6B-204ENST00000398361 UACAQ9BZF9 1416 aa31.74■■■□□ 2.67
GPM6B-204ENST00000398361 TSPOAP1O95153 1857 aa31.72■■■□□ 2.67
GPM6B-204ENST00000398361 KIF21BO75037 1637 aa31.68■■■□□ 2.66
GPM6B-204ENST00000398361 ASXL2Q76L83 1435 aa31.64■■■□□ 2.66
GPM6B-204ENST00000398361 GOLGA3Q08378 1498 aa31.64■■■□□ 2.66
GPM6B-204ENST00000398361 PLB1Q6P1J6 1458 aa31.64■■■□□ 2.66
GPM6B-204ENST00000398361 ZCCHC11Q5TAX3 1644 aaKnown RBP31.6■■■□□ 2.65
GPM6B-204ENST00000398361 KDM5BQ9UGL1 1544 aa31.59■■■□□ 2.65
GPM6B-204ENST00000398361 GLI2P10070 1586 aa31.56■■■□□ 2.64
GPM6B-204ENST00000398361 KDM6BO15054 1643 aa31.56■■■□□ 2.64
GPM6B-204ENST00000398361 PPRC1Q5VV67 1664 aaKnown RBP31.48■■■□□ 2.63
GPM6B-204ENST00000398361 ABCA8O94911 1581 aa31.47■■■□□ 2.63
GPM6B-204ENST00000398361 EPRSP07814 1512 aaKnown RBP31.45■■■□□ 2.63
GPM6B-204ENST00000398361 MAP3K4Q9Y6R4 1608 aa31.42■■■□□ 2.62
GPM6B-204ENST00000398361 EHMT2Q96KQ7 1210 aa31.39■■■□□ 2.62
GPM6B-204ENST00000398361 WDR7Q9Y4E6 1490 aa31.39■■■□□ 2.62
GPM6B-204ENST00000398361 SAMD9Q5K651 1589 aa31.38■■■□□ 2.61
GPM6B-204ENST00000398361 UBTFP17480 764 aaKnown RBP31.37■■■□□ 2.61
GPM6B-204ENST00000398361 P3H3Q8IVL6 736 aa31.31■■■□□ 2.6
GPM6B-204ENST00000398361 TEX14Q8IWB6 1497 aa31.3■■■□□ 2.6
GPM6B-204ENST00000398361 RANGAP1P46060 587 aaPredicted RBP31.28■■■□□ 2.6
GPM6B-204ENST00000398361 CFAP43Q8NDM7 1665 aa31.26■■■□□ 2.6
GPM6B-204ENST00000398361 EFCAB5A4FU69 1503 aa31.25■■■□□ 2.59
GPM6B-204ENST00000398361 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.59
GPM6B-204ENST00000398361 KCNH8Q96L42 1107 aa31.18■■■□□ 2.58
GPM6B-204ENST00000398361 FHOD3Q2V2M9 1422 aa31.16■■■□□ 2.58
GPM6B-204ENST00000398361 ATP10BO94823 1461 aa31.16■■■□□ 2.58
GPM6B-204ENST00000398361 ARID3CA6NKF2 412 aa31.15■■■□□ 2.58
GPM6B-204ENST00000398361 CD109Q6YHK3 1445 aa31.15■■■□□ 2.58
GPM6B-204ENST00000398361 COL17A1Q9UMD9 1497 aaPredicted RBP31.14■■■□□ 2.58
GPM6B-204ENST00000398361 MAGI3Q5TCQ9 1506 aa31.14■■■□□ 2.57
GPM6B-204ENST00000398361 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
GPM6B-204ENST00000398361 KDM4FA0A1W2PPD8 638 aa31.03■■■□□ 2.56
GPM6B-204ENST00000398361 ABCA9Q8IUA7 1624 aa31.02■■■□□ 2.56
GPM6B-204ENST00000398361 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
GPM6B-204ENST00000398361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31■■■□□ 2.55
GPM6B-204ENST00000398361 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
GPM6B-204ENST00000398361 ILDR1Q86SU0 546 aaPredicted RBP30.98■■■□□ 2.55
GPM6B-204ENST00000398361 FMN1Q68DA7 1419 aa30.94■■■□□ 2.54
GPM6B-204ENST00000398361 ADGRL1O94910 1474 aa30.91■■■□□ 2.54
GPM6B-204ENST00000398361 CLIP1P30622 1438 aa30.9■■■□□ 2.54
GPM6B-204ENST00000398361 ARAP3Q8WWN8 1544 aa30.88■■■□□ 2.53
GPM6B-204ENST00000398361 PHLDB1Q86UU1 1377 aa30.84■■■□□ 2.53
GPM6B-204ENST00000398361 PLEKHD1A6NEE1 506 aa30.84■■■□□ 2.53
GPM6B-204ENST00000398361 LOC105371045A0A1W2PR82 267 aa30.83■■■□□ 2.53
GPM6B-204ENST00000398361 HECW1Q76N89 1606 aa30.81■■■□□ 2.52
GPM6B-204ENST00000398361 NEO1Q92859 1461 aa30.81■■■□□ 2.52
GPM6B-204ENST00000398361 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
GPM6B-204ENST00000398361 CDK13Q14004 1512 aaKnown RBP30.77■■■□□ 2.52
GPM6B-204ENST00000398361 ATP1B4Q9UN42 357 aaPredicted RBP30.74■■■□□ 2.51
GPM6B-204ENST00000398361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.73■■■□□ 2.51
GPM6B-204ENST00000398361 CFAP74Q9C0B2 1584 aa30.71■■■□□ 2.51
GPM6B-204ENST00000398361 CASKIN1Q8WXD9 1431 aa30.71■■■□□ 2.51
GPM6B-204ENST00000398361 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
GPM6B-204ENST00000398361 TTC37Q6PGP7 1564 aa30.7■■■□□ 2.5
GPM6B-204ENST00000398361 LRRIQ1Q96JM4 1722 aa30.67■■■□□ 2.5
GPM6B-204ENST00000398361 FRMPD1Q5SYB0 1578 aa30.66■■■□□ 2.5
GPM6B-204ENST00000398361 RAPGEF3O95398 923 aa30.65■■■□□ 2.5
GPM6B-204ENST00000398361 FYCO1Q9BQS8 1478 aa30.64■■■□□ 2.5
GPM6B-204ENST00000398361 FANCAO15360 1455 aa30.63■■■□□ 2.49
GPM6B-204ENST00000398361 RICTORQ6R327 1708 aa30.61■■■□□ 2.49
GPM6B-204ENST00000398361 AKNAQ7Z591 1439 aa30.61■■■□□ 2.49
GPM6B-204ENST00000398361 CCDC18Q5T9S5 1454 aa30.59■■■□□ 2.49
GPM6B-204ENST00000398361 DENND4BO75064 1496 aaPredicted RBP30.58■■■□□ 2.49
GPM6B-204ENST00000398361 CDK11AQ9UQ88 783 aaPredicted RBP30.58■■■□□ 2.49
GPM6B-204ENST00000398361 MYO5CQ9NQX4 1742 aa30.57■■■□□ 2.48
GPM6B-204ENST00000398361 KIF14Q15058 1648 aa30.53■■■□□ 2.48
GPM6B-204ENST00000398361 PLCH2O75038 1416 aa30.51■■■□□ 2.47
GPM6B-204ENST00000398361 ARHGEF40Q8TER5 1519 aa30.51■■■□□ 2.47
GPM6B-204ENST00000398361 TROQ12816 1431 aaPredicted RBP30.48■■■□□ 2.47
GPM6B-204ENST00000398361 ADAMTSL3P82987 1691 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms