RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
APEX1-202ENST00000398030 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
APEX1-202ENST00000398030 NUP160Q12769 1436 aa18.48■□□□□ 0.55
APEX1-202ENST00000398030 CLIP1P30622 1438 aa18.48■□□□□ 0.55
APEX1-202ENST00000398030 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
APEX1-202ENST00000398030 IQGAP2Q13576 1575 aa18.46■□□□□ 0.55
APEX1-202ENST00000398030 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
APEX1-202ENST00000398030 CHD1O14646 1710 aa18.43■□□□□ 0.54
APEX1-202ENST00000398030 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
APEX1-202ENST00000398030 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
APEX1-202ENST00000398030 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
APEX1-202ENST00000398030 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.54
APEX1-202ENST00000398030 UGGT2Q9NYU1 1516 aa18.35■□□□□ 0.53
APEX1-202ENST00000398030 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
APEX1-202ENST00000398030 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
APEX1-202ENST00000398030 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
APEX1-202ENST00000398030 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
APEX1-202ENST00000398030 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
APEX1-202ENST00000398030 APLP2Q06481 763 aa18.27■□□□□ 0.51
APEX1-202ENST00000398030 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
APEX1-202ENST00000398030 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
APEX1-202ENST00000398030 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
APEX1-202ENST00000398030 KIAA0556O60303 1618 aa18.25■□□□□ 0.51
APEX1-202ENST00000398030 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
APEX1-202ENST00000398030 ARAP1Q96P48 1450 aa18.22■□□□□ 0.51
APEX1-202ENST00000398030 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
APEX1-202ENST00000398030 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
APEX1-202ENST00000398030 PTPRGP23470 1445 aa18.15■□□□□ 0.5
APEX1-202ENST00000398030 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
APEX1-202ENST00000398030 ATP1B4Q9UN42 357 aaPredicted RBP18.15■□□□□ 0.5
APEX1-202ENST00000398030 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
APEX1-202ENST00000398030 CASKIN1Q8WXD9 1431 aa18.12■□□□□ 0.49
APEX1-202ENST00000398030 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
APEX1-202ENST00000398030 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
APEX1-202ENST00000398030 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
APEX1-202ENST00000398030 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
APEX1-202ENST00000398030 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
APEX1-202ENST00000398030 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
APEX1-202ENST00000398030 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
APEX1-202ENST00000398030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.02■□□□□ 0.47
APEX1-202ENST00000398030 HNRNPUL2Q1KMD3 747 aaKnown RBP18.02■□□□□ 0.47
APEX1-202ENST00000398030 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
APEX1-202ENST00000398030 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
APEX1-202ENST00000398030 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
APEX1-202ENST00000398030 ABCA8O94911 1581 aa17.98■□□□□ 0.47
APEX1-202ENST00000398030 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
APEX1-202ENST00000398030 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
APEX1-202ENST00000398030 UHRF1BP1LA0JNW5 1464 aa17.96■□□□□ 0.47
APEX1-202ENST00000398030 EPRSP07814 1512 aaKnown RBP17.96■□□□□ 0.46
APEX1-202ENST00000398030 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
APEX1-202ENST00000398030 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
APEX1-202ENST00000398030 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
APEX1-202ENST00000398030 CFAP43Q8NDM7 1665 aa17.91■□□□□ 0.46
APEX1-202ENST00000398030 PLEKHD1A6NEE1 506 aa17.91■□□□□ 0.46
APEX1-202ENST00000398030 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
APEX1-202ENST00000398030 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
APEX1-202ENST00000398030 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
APEX1-202ENST00000398030 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
APEX1-202ENST00000398030 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
APEX1-202ENST00000398030 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
APEX1-202ENST00000398030 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
APEX1-202ENST00000398030 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
APEX1-202ENST00000398030 KDM5BQ9UGL1 1544 aa17.85■□□□□ 0.45
APEX1-202ENST00000398030 ATP10BO94823 1461 aa17.84■□□□□ 0.45
APEX1-202ENST00000398030 TROQ12816 1431 aaPredicted RBP17.82■□□□□ 0.44
APEX1-202ENST00000398030 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
APEX1-202ENST00000398030 ADCY10Q96PN6 1610 aa17.8■□□□□ 0.44
APEX1-202ENST00000398030 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
APEX1-202ENST00000398030 ZCCHC11Q5TAX3 1644 aaKnown RBP17.77■□□□□ 0.43
APEX1-202ENST00000398030 SUPT6HQ7KZ85 1726 aaKnown RBP17.76■□□□□ 0.43
APEX1-202ENST00000398030 KIF14Q15058 1648 aa17.75■□□□□ 0.43
APEX1-202ENST00000398030 CCNB3Q8WWL7 1395 aa17.74■□□□□ 0.43
APEX1-202ENST00000398030 WDR7Q9Y4E6 1490 aa17.74■□□□□ 0.43
APEX1-202ENST00000398030 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
APEX1-202ENST00000398030 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
APEX1-202ENST00000398030 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
APEX1-202ENST00000398030 ASXL2Q76L83 1435 aa17.71■□□□□ 0.42
APEX1-202ENST00000398030 MAGI3Q5TCQ9 1506 aa17.68■□□□□ 0.42
APEX1-202ENST00000398030 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
APEX1-202ENST00000398030 MYOM3Q5VTT5 1437 aa17.68■□□□□ 0.42
APEX1-202ENST00000398030 MAPKBP1O60336 1514 aa17.68■□□□□ 0.42
APEX1-202ENST00000398030 MIA2Q96PC5 1412 aa17.65■□□□□ 0.42
APEX1-202ENST00000398030 CFDP1Q9UEE9 299 aaPredicted RBP17.64■□□□□ 0.41
APEX1-202ENST00000398030 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
APEX1-202ENST00000398030 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
APEX1-202ENST00000398030 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
APEX1-202ENST00000398030 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
APEX1-202ENST00000398030 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
APEX1-202ENST00000398030 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
APEX1-202ENST00000398030 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.41
APEX1-202ENST00000398030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.41e-5■■■■□ 25.8
APEX1-202ENST00000398030 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
APEX1-202ENST00000398030 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
APEX1-202ENST00000398030 PLEKHH2Q8IVE3 1493 aa17.55■□□□□ 0.4
APEX1-202ENST00000398030 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
APEX1-202ENST00000398030 ARHGAP5Q13017 1502 aa17.55■□□□□ 0.4
APEX1-202ENST00000398030 ARAP3Q8WWN8 1544 aa17.54■□□□□ 0.4
APEX1-202ENST00000398030 PLCH2O75038 1416 aa17.54■□□□□ 0.4
APEX1-202ENST00000398030 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
APEX1-202ENST00000398030 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms