RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 CHD1O14646 1710 aa31.09■■■□□ 2.57
PDLIM2-205ENST00000397761 IQGAP2Q13576 1575 aa31.03■■■□□ 2.56
PDLIM2-205ENST00000397761 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
PDLIM2-205ENST00000397761 CHMP7Q8WUX9 453 aaPredicted RBP31.02■■■□□ 2.56
PDLIM2-205ENST00000397761 NUP160Q12769 1436 aa31.02■■■□□ 2.56
PDLIM2-205ENST00000397761 ARHGAP35Q9NRY4 1499 aa31.02■■■□□ 2.56
PDLIM2-205ENST00000397761 EFCAB5A4FU69 1503 aa31■■■□□ 2.55
PDLIM2-205ENST00000397761 KIAA0586Q9BVV6 1533 aa31■■■□□ 2.55
PDLIM2-205ENST00000397761 SAMD9Q5K651 1589 aa30.97■■■□□ 2.55
PDLIM2-205ENST00000397761 ARAP1Q96P48 1450 aa30.96■■■□□ 2.55
PDLIM2-205ENST00000397761 UGGT2Q9NYU1 1516 aa30.9■■■□□ 2.54
PDLIM2-205ENST00000397761 VPS8Q8N3P4 1428 aa30.89■■■□□ 2.54
PDLIM2-205ENST00000397761 RANGAP1P46060 587 aaPredicted RBP30.89■■■□□ 2.53
PDLIM2-205ENST00000397761 FBLN2P98095 1184 aa30.89■■■□□ 2.53
PDLIM2-205ENST00000397761 OSCARQ8IYS5 282 aa30.8■■■□□ 2.52
PDLIM2-205ENST00000397761 KIAA0556O60303 1618 aa30.74■■■□□ 2.51
PDLIM2-205ENST00000397761 SHROOM2Q13796 1616 aa30.73■■■□□ 2.51
PDLIM2-205ENST00000397761 DISP1Q96F81 1524 aa30.72■■■□□ 2.51
PDLIM2-205ENST00000397761 FHOD3Q2V2M9 1422 aa30.72■■■□□ 2.51
PDLIM2-205ENST00000397761 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
PDLIM2-205ENST00000397761 FMN1Q68DA7 1419 aa30.64■■■□□ 2.5
PDLIM2-205ENST00000397761 JPH4Q96JJ6 628 aa30.63■■■□□ 2.49
PDLIM2-205ENST00000397761 P3H3Q8IVL6 736 aa30.62■■■□□ 2.49
PDLIM2-205ENST00000397761 PCF11O94913 1555 aaKnown RBP30.61■■■□□ 2.49
PDLIM2-205ENST00000397761 FYCO1Q9BQS8 1478 aa30.57■■■□□ 2.48
PDLIM2-205ENST00000397761 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
PDLIM2-205ENST00000397761 CASKIN1Q8WXD9 1431 aa30.56■■■□□ 2.48
PDLIM2-205ENST00000397761 MAP3K1Q13233 1512 aa30.53■■■□□ 2.48
PDLIM2-205ENST00000397761 PRG4Q92954 1404 aaPredicted RBP30.5■■■□□ 2.47
PDLIM2-205ENST00000397761 CFAP43Q8NDM7 1665 aa30.48■■■□□ 2.47
PDLIM2-205ENST00000397761 LRRIQ1Q96JM4 1722 aa30.48■■■□□ 2.47
PDLIM2-205ENST00000397761 TIAM1Q13009 1591 aa30.45■■■□□ 2.46
PDLIM2-205ENST00000397761 RIMBP3CA6NJZ7 1639 aa30.45■■■□□ 2.46
PDLIM2-205ENST00000397761 RIMBP3BA6NNM3 1639 aa30.45■■■□□ 2.46
PDLIM2-205ENST00000397761 RIMBP3Q9UFD9 1639 aa30.45■■■□□ 2.46
PDLIM2-205ENST00000397761 HECW1Q76N89 1606 aa30.42■■■□□ 2.46
PDLIM2-205ENST00000397761 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
PDLIM2-205ENST00000397761 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
PDLIM2-205ENST00000397761 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
PDLIM2-205ENST00000397761 APLP2Q06481 763 aa30.39■■■□□ 2.46
PDLIM2-205ENST00000397761 ABCA8O94911 1581 aa30.33■■■□□ 2.45
PDLIM2-205ENST00000397761 CCDC18Q5T9S5 1454 aa30.3■■■□□ 2.44
PDLIM2-205ENST00000397761 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
PDLIM2-205ENST00000397761 NUP153P49790 1475 aaKnown RBP30.27■■■□□ 2.44
PDLIM2-205ENST00000397761 EPRSP07814 1512 aaKnown RBP30.27■■■□□ 2.44
PDLIM2-205ENST00000397761 PTPRGP23470 1445 aa30.26■■■□□ 2.44
PDLIM2-205ENST00000397761 PLB1Q6P1J6 1458 aa30.26■■■□□ 2.43
PDLIM2-205ENST00000397761 LRRC9Q6ZRR7 1453 aa30.25■■■□□ 2.43
PDLIM2-205ENST00000397761 KANK4Q5T7N3 995 aaPredicted RBP30.23■■■□□ 2.43
PDLIM2-205ENST00000397761 TRIM26Q12899 539 aaPredicted RBP30.19■■■□□ 2.42
PDLIM2-205ENST00000397761 ATP1B4Q9UN42 357 aaPredicted RBP30.19■■■□□ 2.42
PDLIM2-205ENST00000397761 CDK13Q14004 1512 aaKnown RBP30.16■■■□□ 2.42
PDLIM2-205ENST00000397761 TTBK1Q5TCY1 1321 aaPredicted RBP30.14■■■□□ 2.42
PDLIM2-205ENST00000397761 UACAQ9BZF9 1416 aa30.12■■■□□ 2.41
PDLIM2-205ENST00000397761 EHBP1L1Q8N3D4 1523 aa30.12■■■□□ 2.41
PDLIM2-205ENST00000397761 MAGI3Q5TCQ9 1506 aa30.11■■■□□ 2.41
PDLIM2-205ENST00000397761 ABCC2Q92887 1545 aa30.11■■■□□ 2.41
PDLIM2-205ENST00000397761 UHRF1BP1LA0JNW5 1464 aa30.09■■■□□ 2.41
PDLIM2-205ENST00000397761 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
PDLIM2-205ENST00000397761 ATP10BO94823 1461 aa30.04■■■□□ 2.4
PDLIM2-205ENST00000397761 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
PDLIM2-205ENST00000397761 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
PDLIM2-205ENST00000397761 ADCY10Q96PN6 1610 aa29.98■■■□□ 2.39
PDLIM2-205ENST00000397761 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
PDLIM2-205ENST00000397761 KDM5BQ9UGL1 1544 aa29.94■■■□□ 2.38
PDLIM2-205ENST00000397761 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
PDLIM2-205ENST00000397761 CDK11AQ9UQ88 783 aaPredicted RBP29.93■■■□□ 2.38
PDLIM2-205ENST00000397761 NCOA2Q15596 1464 aa29.93■■■□□ 2.38
PDLIM2-205ENST00000397761 ZCCHC11Q5TAX3 1644 aaKnown RBP29.93■■■□□ 2.38
PDLIM2-205ENST00000397761 ARID3CA6NKF2 412 aa29.93■■■□□ 2.38
PDLIM2-205ENST00000397761 TROQ12816 1431 aaPredicted RBP29.92■■■□□ 2.38
PDLIM2-205ENST00000397761 PHLDB1Q86UU1 1377 aa29.91■■■□□ 2.38
PDLIM2-205ENST00000397761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.83■■■□□ 2.37
PDLIM2-205ENST00000397761 HNRNPUL2Q1KMD3 747 aaKnown RBP29.83■■■□□ 2.37
PDLIM2-205ENST00000397761 KIF14Q15058 1648 aa29.83■■■□□ 2.37
PDLIM2-205ENST00000397761 MYOM3Q5VTT5 1437 aa29.81■■■□□ 2.36
PDLIM2-205ENST00000397761 CCNB3Q8WWL7 1395 aa29.79■■■□□ 2.36
PDLIM2-205ENST00000397761 PLEKHD1A6NEE1 506 aa29.79■■■□□ 2.36
PDLIM2-205ENST00000397761 FGD6Q6ZV73 1430 aa29.76■■■□□ 2.35
PDLIM2-205ENST00000397761 ITSN2Q9NZM3 1697 aa29.75■■■□□ 2.35
PDLIM2-205ENST00000397761 ABCC10Q5T3U5 1492 aa29.73■■■□□ 2.35
PDLIM2-205ENST00000397761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.73■■■□□ 2.35
PDLIM2-205ENST00000397761 CDC42BPAQ5VT25 1732 aa29.72■■■□□ 2.35
PDLIM2-205ENST00000397761 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
PDLIM2-205ENST00000397761 PTPN23Q9H3S7 1636 aa29.69■■■□□ 2.34
PDLIM2-205ENST00000397761 TCOF1Q13428 1488 aaKnown RBP29.66■■■□□ 2.34
PDLIM2-205ENST00000397761 GPATCH8Q9UKJ3 1502 aaKnown RBP29.64■■■□□ 2.34
PDLIM2-205ENST00000397761 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
PDLIM2-205ENST00000397761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.62■■■□□ 2.33
PDLIM2-205ENST00000397761 TTC37Q6PGP7 1564 aa29.61■■■□□ 2.33
PDLIM2-205ENST00000397761 PREX2Q70Z35 1606 aa29.6■■■□□ 2.33
PDLIM2-205ENST00000397761 MYO5CQ9NQX4 1742 aa29.59■■■□□ 2.33
PDLIM2-205ENST00000397761 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
PDLIM2-205ENST00000397761 ASXL2Q76L83 1435 aa29.57■■■□□ 2.32
PDLIM2-205ENST00000397761 MAPKBP1O60336 1514 aa29.53■■■□□ 2.32
PDLIM2-205ENST00000397761 ABCA9Q8IUA7 1624 aa29.52■■■□□ 2.32
PDLIM2-205ENST00000397761 NPM1P06748 294 aaKnown RBP eCLIP29.52■■■□□ 2.32
PDLIM2-205ENST00000397761 FAM50AQ14320 339 aaKnown RBP29.5■■■□□ 2.31
PDLIM2-205ENST00000397761 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
PDLIM2-205ENST00000397761 ARAP3Q8WWN8 1544 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms