RNA–Protein interactions for RNA: ENST00000397497.8

PTK2B-202, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 2

Gene PTK2B, Length 3,161 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-202ENST00000397497 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
PTK2B-202ENST00000397497 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
PTK2B-202ENST00000397497 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
PTK2B-202ENST00000397497 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.4
PTK2B-202ENST00000397497 ANP32CO43423 234 aa17.58■□□□□ 0.4
PTK2B-202ENST00000397497 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
PTK2B-202ENST00000397497 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
PTK2B-202ENST00000397497 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
PTK2B-202ENST00000397497 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
PTK2B-202ENST00000397497 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
PTK2B-202ENST00000397497 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
PTK2B-202ENST00000397497 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
PTK2B-202ENST00000397497 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
PTK2B-202ENST00000397497 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
PTK2B-202ENST00000397497 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
PTK2B-202ENST00000397497 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
PTK2B-202ENST00000397497 PAK3O75914 559 aaPredicted RBP17.37■□□□□ 0.37
PTK2B-202ENST00000397497 HNRNPUQ00839 825 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTK2B-202ENST00000397497 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
PTK2B-202ENST00000397497 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
PTK2B-202ENST00000397497 UBE2Q2Q8WVN8 375 aa17.35■□□□□ 0.37
PTK2B-202ENST00000397497 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
PTK2B-202ENST00000397497 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
PTK2B-202ENST00000397497 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
PTK2B-202ENST00000397497 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.37
PTK2B-202ENST00000397497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTK2B-202ENST00000397497 NBR1Q14596 966 aa17.3■□□□□ 0.36
PTK2B-202ENST00000397497 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
PTK2B-202ENST00000397497 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
PTK2B-202ENST00000397497 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
PTK2B-202ENST00000397497 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
PTK2B-202ENST00000397497 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.35
PTK2B-202ENST00000397497 HIRIP3Q9BW71 556 aaPredicted RBP17.26■□□□□ 0.35
PTK2B-202ENST00000397497 RTL5Q5HYW3 569 aaPredicted RBP17.25■□□□□ 0.35
PTK2B-202ENST00000397497 B4GALNT3Q6L9W6 998 aa17.24■□□□□ 0.35
PTK2B-202ENST00000397497 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
PTK2B-202ENST00000397497 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
PTK2B-202ENST00000397497 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
PTK2B-202ENST00000397497 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
PTK2B-202ENST00000397497 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
PTK2B-202ENST00000397497 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
PTK2B-202ENST00000397497 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
PTK2B-202ENST00000397497 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
PTK2B-202ENST00000397497 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
PTK2B-202ENST00000397497 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
PTK2B-202ENST00000397497 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
PTK2B-202ENST00000397497 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
PTK2B-202ENST00000397497 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
PTK2B-202ENST00000397497 UACAQ9BZF9 1416 aa17.19■□□□□ 0.34
PTK2B-202ENST00000397497 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
PTK2B-202ENST00000397497 CUX1P39880 1505 aa17.17■□□□□ 0.34
PTK2B-202ENST00000397497 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
PTK2B-202ENST00000397497 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
PTK2B-202ENST00000397497 CCDC18Q5T9S5 1454 aa17.15■□□□□ 0.34
PTK2B-202ENST00000397497 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.34
PTK2B-202ENST00000397497 HFM1A2PYH4 1435 aa17.13■□□□□ 0.33
PTK2B-202ENST00000397497 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
PTK2B-202ENST00000397497 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
PTK2B-202ENST00000397497 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.32
PTK2B-202ENST00000397497 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
PTK2B-202ENST00000397497 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
PTK2B-202ENST00000397497 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.324e-7■■■■□ 22.2
PTK2B-202ENST00000397497 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
PTK2B-202ENST00000397497 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
PTK2B-202ENST00000397497 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
PTK2B-202ENST00000397497 FGD6Q6ZV73 1430 aa17.03■□□□□ 0.32
PTK2B-202ENST00000397497 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.32
PTK2B-202ENST00000397497 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
PTK2B-202ENST00000397497 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
PTK2B-202ENST00000397497 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
PTK2B-202ENST00000397497 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
PTK2B-202ENST00000397497 NAIPQ13075 1403 aa17.01■□□□□ 0.31
PTK2B-202ENST00000397497 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
PTK2B-202ENST00000397497 PTPRKQ15262 1439 aa16.98■□□□□ 0.31
PTK2B-202ENST00000397497 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
PTK2B-202ENST00000397497 NEFMP07197 916 aa16.98■□□□□ 0.31
PTK2B-202ENST00000397497 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
PTK2B-202ENST00000397497 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
PTK2B-202ENST00000397497 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
PTK2B-202ENST00000397497 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PTK2B-202ENST00000397497 IGF1RP08069 1367 aa16.96■□□□□ 0.31
PTK2B-202ENST00000397497 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
PTK2B-202ENST00000397497 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTK2B-202ENST00000397497 TCERG1O14776 1098 aaKnown RBP16.95■□□□□ 0.3
PTK2B-202ENST00000397497 FAM9BQ8IZU0 186 aa16.95■□□□□ 0.3
PTK2B-202ENST00000397497 FMN1Q68DA7 1419 aa16.95■□□□□ 0.3
PTK2B-202ENST00000397497 MS4A1P11836 297 aa16.93■□□□□ 0.3
PTK2B-202ENST00000397497 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
PTK2B-202ENST00000397497 GSE1Q14687 1217 aa16.91■□□□□ 0.3
PTK2B-202ENST00000397497 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
PTK2B-202ENST00000397497 BRPF3Q9ULD4 1205 aa16.89■□□□□ 0.29
PTK2B-202ENST00000397497 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
PTK2B-202ENST00000397497 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
PTK2B-202ENST00000397497 PDE4AP27815 886 aa16.87■□□□□ 0.29
PTK2B-202ENST00000397497 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
PTK2B-202ENST00000397497 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
PTK2B-202ENST00000397497 CFTRP13569 1480 aa16.86■□□□□ 0.29
PTK2B-202ENST00000397497 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
PTK2B-202ENST00000397497 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
PTK2B-202ENST00000397497 LRRIQ1Q96JM4 1722 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms