RNA–Protein interactions for RNA: ENST00000397497.8

PTK2B-202, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 2

Gene PTK2B, Length 3,161 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-202ENST00000397497 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
PTK2B-202ENST00000397497 HRCP23327 699 aa21.5■■□□□ 1.03
PTK2B-202ENST00000397497 PELP1Q8IZL8 1130 aaKnown RBP21.13■□□□□ 0.97
PTK2B-202ENST00000397497 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
PTK2B-202ENST00000397497 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
PTK2B-202ENST00000397497 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
PTK2B-202ENST00000397497 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
PTK2B-202ENST00000397497 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
PTK2B-202ENST00000397497 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
PTK2B-202ENST00000397497 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
PTK2B-202ENST00000397497 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
PTK2B-202ENST00000397497 MYT1Q01538 1121 aa20.43■□□□□ 0.86
PTK2B-202ENST00000397497 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
PTK2B-202ENST00000397497 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
PTK2B-202ENST00000397497 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
PTK2B-202ENST00000397497 ZEB1P37275 1124 aaPredicted RBP20.24■□□□□ 0.83
PTK2B-202ENST00000397497 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
PTK2B-202ENST00000397497 ACIN1Q9UKV3 1341 aaKnown RBP19.84■□□□□ 0.77
PTK2B-202ENST00000397497 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
PTK2B-202ENST00000397497 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
PTK2B-202ENST00000397497 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
PTK2B-202ENST00000397497 ABCC9O60706 1549 aa19.4■□□□□ 0.7
PTK2B-202ENST00000397497 DIEXFQ68CQ4 756 aaKnown RBP19.32■□□□□ 0.68
PTK2B-202ENST00000397497 TTBK1Q5TCY1 1321 aaPredicted RBP19.31■□□□□ 0.68
PTK2B-202ENST00000397497 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
PTK2B-202ENST00000397497 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
PTK2B-202ENST00000397497 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
PTK2B-202ENST00000397497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
PTK2B-202ENST00000397497 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
PTK2B-202ENST00000397497 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
PTK2B-202ENST00000397497 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
PTK2B-202ENST00000397497 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
PTK2B-202ENST00000397497 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
PTK2B-202ENST00000397497 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.62
PTK2B-202ENST00000397497 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
PTK2B-202ENST00000397497 ANP32EQ9BTT0 268 aa18.81■□□□□ 0.6
PTK2B-202ENST00000397497 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
PTK2B-202ENST00000397497 MIER1Q8N108 512 aa18.79■□□□□ 0.6
PTK2B-202ENST00000397497 YTHDC1Q96MU7 727 aaKnown RBP18.76■□□□□ 0.59
PTK2B-202ENST00000397497 SUPT16HQ9Y5B9 1047 aaKnown RBP18.68■□□□□ 0.58
PTK2B-202ENST00000397497 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
PTK2B-202ENST00000397497 SCRIBQ14160 1630 aa18.64■□□□□ 0.57
PTK2B-202ENST00000397497 CEP162Q5TB80 1403 aa18.62■□□□□ 0.57
PTK2B-202ENST00000397497 EHMT2Q96KQ7 1210 aa18.59■□□□□ 0.57
PTK2B-202ENST00000397497 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
PTK2B-202ENST00000397497 BAZ1AQ9NRL2 1556 aaPredicted RBP18.52■□□□□ 0.56
PTK2B-202ENST00000397497 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
PTK2B-202ENST00000397497 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
PTK2B-202ENST00000397497 WIZO95785 1651 aa18.46■□□□□ 0.55
PTK2B-202ENST00000397497 EEA1Q15075 1411 aa18.44■□□□□ 0.54
PTK2B-202ENST00000397497 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
PTK2B-202ENST00000397497 NACADO15069 1562 aa18.38■□□□□ 0.53
PTK2B-202ENST00000397497 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
PTK2B-202ENST00000397497 ABCC8Q09428 1581 aa18.35■□□□□ 0.53
PTK2B-202ENST00000397497 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
PTK2B-202ENST00000397497 SOGA1O94964 1423 aa18.26■□□□□ 0.51
PTK2B-202ENST00000397497 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
PTK2B-202ENST00000397497 KIF21BO75037 1637 aa18.23■□□□□ 0.51
PTK2B-202ENST00000397497 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
PTK2B-202ENST00000397497 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
PTK2B-202ENST00000397497 PRKCSHP14314 528 aaPredicted RBP18.16■□□□□ 0.5
PTK2B-202ENST00000397497 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
PTK2B-202ENST00000397497 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
PTK2B-202ENST00000397497 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
PTK2B-202ENST00000397497 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
PTK2B-202ENST00000397497 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
PTK2B-202ENST00000397497 CLIP1P30622 1438 aa18.11■□□□□ 0.49
PTK2B-202ENST00000397497 CUX2O14529 1486 aa18.1■□□□□ 0.49
PTK2B-202ENST00000397497 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
PTK2B-202ENST00000397497 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
PTK2B-202ENST00000397497 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
PTK2B-202ENST00000397497 MSH5O43196 834 aa18.04■□□□□ 0.48
PTK2B-202ENST00000397497 FKBP8Q14318 412 aa18.01■□□□□ 0.47
PTK2B-202ENST00000397497 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
PTK2B-202ENST00000397497 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PTK2B-202ENST00000397497 BCANQ96GW7 911 aa17.95■□□□□ 0.46
PTK2B-202ENST00000397497 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
PTK2B-202ENST00000397497 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
PTK2B-202ENST00000397497 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
PTK2B-202ENST00000397497 NEFLP07196 543 aa17.89■□□□□ 0.45
PTK2B-202ENST00000397497 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
PTK2B-202ENST00000397497 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
PTK2B-202ENST00000397497 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
PTK2B-202ENST00000397497 APLP2Q06481 763 aa17.83■□□□□ 0.45
PTK2B-202ENST00000397497 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
PTK2B-202ENST00000397497 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
PTK2B-202ENST00000397497 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
PTK2B-202ENST00000397497 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
PTK2B-202ENST00000397497 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
PTK2B-202ENST00000397497 ITGAEP38570 1179 aa17.73■□□□□ 0.43
PTK2B-202ENST00000397497 DEKP35659 375 aaKnown RBP17.72■□□□□ 0.43
PTK2B-202ENST00000397497 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.42
PTK2B-202ENST00000397497 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
PTK2B-202ENST00000397497 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
PTK2B-202ENST00000397497 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
PTK2B-202ENST00000397497 TIMELESSQ9UNS1 1208 aa17.65■□□□□ 0.42
PTK2B-202ENST00000397497 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
PTK2B-202ENST00000397497 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
PTK2B-202ENST00000397497 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
PTK2B-202ENST00000397497 PRXQ9BXM0 1461 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms