RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
SEC13-206ENST00000397102 ABCC10Q5T3U5 1492 aa26.92■■□□□ 1.9
SEC13-206ENST00000397102 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
SEC13-206ENST00000397102 FAM69CQ0P6D2 419 aa26.87■■□□□ 1.89
SEC13-206ENST00000397102 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
SEC13-206ENST00000397102 NPM1P06748 294 aaKnown RBP eCLIP26.85■■□□□ 1.89
SEC13-206ENST00000397102 ADCY10Q96PN6 1610 aa26.84■■□□□ 1.89
SEC13-206ENST00000397102 KDM6BO15054 1643 aa26.76■■□□□ 1.87
SEC13-206ENST00000397102 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
SEC13-206ENST00000397102 TSPOAP1O95153 1857 aa26.69■■□□□ 1.86
SEC13-206ENST00000397102 CUL7Q14999 1698 aa26.69■■□□□ 1.86
SEC13-206ENST00000397102 IGF1RP08069 1367 aa26.64■■□□□ 1.86
SEC13-206ENST00000397102 KDM4FA0A1W2PPD8 638 aa26.62■■□□□ 1.85
SEC13-206ENST00000397102 KIF27Q86VH2 1401 aa26.61■■□□□ 1.85
SEC13-206ENST00000397102 PTPRGP23470 1445 aa26.56■■□□□ 1.84
SEC13-206ENST00000397102 ABCC2Q92887 1545 aa26.51■■□□□ 1.83
SEC13-206ENST00000397102 CARMIL2Q6F5E8 1435 aa26.49■■□□□ 1.83
SEC13-206ENST00000397102 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
SEC13-206ENST00000397102 GLI2P10070 1586 aa26.48■■□□□ 1.83
SEC13-206ENST00000397102 PPRC1Q5VV67 1664 aaKnown RBP26.47■■□□□ 1.83
SEC13-206ENST00000397102 PLB1Q6P1J6 1458 aa26.46■■□□□ 1.83
SEC13-206ENST00000397102 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
SEC13-206ENST00000397102 ASXL2Q76L83 1435 aa26.45■■□□□ 1.82
SEC13-206ENST00000397102 IQGAP2Q13576 1575 aa26.44■■□□□ 1.82
SEC13-206ENST00000397102 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
SEC13-206ENST00000397102 UHRF1BP1LA0JNW5 1464 aa26.42■■□□□ 1.82
SEC13-206ENST00000397102 UACAQ9BZF9 1416 aa26.36■■□□□ 1.81
SEC13-206ENST00000397102 ADGRL1O94910 1474 aa26.34■■□□□ 1.81
SEC13-206ENST00000397102 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
SEC13-206ENST00000397102 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
SEC13-206ENST00000397102 EPRSP07814 1512 aaKnown RBP26.3■■□□□ 1.8
SEC13-206ENST00000397102 KDM5BQ9UGL1 1544 aa26.3■■□□□ 1.8
SEC13-206ENST00000397102 ILDR1Q86SU0 546 aaPredicted RBP26.28■■□□□ 1.8
SEC13-206ENST00000397102 COL17A1Q9UMD9 1497 aaPredicted RBP26.28■■□□□ 1.8
SEC13-206ENST00000397102 TEX14Q8IWB6 1497 aa26.27■■□□□ 1.8
SEC13-206ENST00000397102 ZCCHC11Q5TAX3 1644 aaKnown RBP26.26■■□□□ 1.79
SEC13-206ENST00000397102 UGGT2Q9NYU1 1516 aa26.25■■□□□ 1.79
SEC13-206ENST00000397102 KIAA0556O60303 1618 aa26.21■■□□□ 1.79
SEC13-206ENST00000397102 RAPGEF2Q9Y4G8 1499 aa26.18■■□□□ 1.78
SEC13-206ENST00000397102 HECW2Q9P2P5 1572 aa26.15■■□□□ 1.78
SEC13-206ENST00000397102 WDR7Q9Y4E6 1490 aa26.13■■□□□ 1.77
SEC13-206ENST00000397102 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
SEC13-206ENST00000397102 CTTNBP2Q8WZ74 1663 aa26.06■■□□□ 1.76
SEC13-206ENST00000397102 MAGI3Q5TCQ9 1506 aa26.04■■□□□ 1.76
SEC13-206ENST00000397102 CD109Q6YHK3 1445 aa26■■□□□ 1.75
SEC13-206ENST00000397102 ABCA8O94911 1581 aa25.99■■□□□ 1.75
SEC13-206ENST00000397102 GOLGA3Q08378 1498 aa25.99■■□□□ 1.75
SEC13-206ENST00000397102 KCNH8Q96L42 1107 aa25.91■■□□□ 1.74
SEC13-206ENST00000397102 KIF21BO75037 1637 aa25.91■■□□□ 1.74
SEC13-206ENST00000397102 ARAP3Q8WWN8 1544 aa25.85■■□□□ 1.73
SEC13-206ENST00000397102 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
SEC13-206ENST00000397102 ABCA9Q8IUA7 1624 aa25.77■■□□□ 1.72
SEC13-206ENST00000397102 ATP10BO94823 1461 aa25.74■■□□□ 1.71
SEC13-206ENST00000397102 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
SEC13-206ENST00000397102 ADAMTSL3P82987 1691 aa25.74■■□□□ 1.71
SEC13-206ENST00000397102 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
SEC13-206ENST00000397102 PTPRMP28827 1452 aa25.7■■□□□ 1.7
SEC13-206ENST00000397102 ARID3CA6NKF2 412 aa25.68■■□□□ 1.7
SEC13-206ENST00000397102 FBXO41Q8TF61 875 aa25.68■■□□□ 1.7
SEC13-206ENST00000397102 NEO1Q92859 1461 aa25.66■■□□□ 1.7
SEC13-206ENST00000397102 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.7
SEC13-206ENST00000397102 P3H3Q8IVL6 736 aa25.64■■□□□ 1.7
SEC13-206ENST00000397102 SAMD9Q5K651 1589 aa25.64■■□□□ 1.69
SEC13-206ENST00000397102 RAPGEF6Q8TEU7 1601 aa25.63■■□□□ 1.69
SEC13-206ENST00000397102 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
SEC13-206ENST00000397102 RAPGEF3O95398 923 aa25.61■■□□□ 1.69
SEC13-206ENST00000397102 MADDQ8WXG6 1647 aa25.59■■□□□ 1.69
SEC13-206ENST00000397102 PCF11O94913 1555 aaKnown RBP25.56■■□□□ 1.68
SEC13-206ENST00000397102 ARHGEF40Q8TER5 1519 aa25.52■■□□□ 1.68
SEC13-206ENST00000397102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
SEC13-206ENST00000397102 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
SEC13-206ENST00000397102 ARID4BQ4LE39 1312 aaPredicted RBP25.51■■□□□ 1.67
SEC13-206ENST00000397102 NUP153P49790 1475 aaKnown RBP25.51■■□□□ 1.67
SEC13-206ENST00000397102 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
SEC13-206ENST00000397102 RICTORQ6R327 1708 aa25.49■■□□□ 1.67
SEC13-206ENST00000397102 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
SEC13-206ENST00000397102 DENND4BO75064 1496 aaPredicted RBP25.46■■□□□ 1.67
SEC13-206ENST00000397102 CFAP74Q9C0B2 1584 aa25.45■■□□□ 1.66
SEC13-206ENST00000397102 CSRNP3Q8WYN3 585 aa25.43■■□□□ 1.66
SEC13-206ENST00000397102 FHOD3Q2V2M9 1422 aa25.42■■□□□ 1.66
SEC13-206ENST00000397102 AKNAQ7Z591 1439 aa25.41■■□□□ 1.66
SEC13-206ENST00000397102 FANCAO15360 1455 aa25.4■■□□□ 1.66
SEC13-206ENST00000397102 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.66
SEC13-206ENST00000397102 PLEKHD1A6NEE1 506 aa25.38■■□□□ 1.65
SEC13-206ENST00000397102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.654e-7■■■■□ 22.2
SEC13-206ENST00000397102 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
SEC13-206ENST00000397102 EFCAB5A4FU69 1503 aa25.35■■□□□ 1.65
SEC13-206ENST00000397102 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
SEC13-206ENST00000397102 ZFYVE16Q7Z3T8 1539 aa25.34■■□□□ 1.65
SEC13-206ENST00000397102 SIGLEC1Q9BZZ2 1709 aa25.34■■□□□ 1.65
SEC13-206ENST00000397102 MAGI2Q86UL8 1455 aa25.31■■□□□ 1.64
SEC13-206ENST00000397102 EEA1Q15075 1411 aa25.3■■□□□ 1.64
SEC13-206ENST00000397102 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
SEC13-206ENST00000397102 HSPA2P54652 639 aa25.3■■□□□ 1.64
SEC13-206ENST00000397102 YEATS2Q9ULM3 1422 aa25.29■■□□□ 1.64
SEC13-206ENST00000397102 FER1L4A9Z1Z3 1794 aa25.28■■□□□ 1.64
SEC13-206ENST00000397102 HECW1Q76N89 1606 aa25.27■■□□□ 1.64
SEC13-206ENST00000397102 PLPPR3Q6T4P5 718 aa25.25■■□□□ 1.63
SEC13-206ENST00000397102 CDK13Q14004 1512 aaKnown RBP25.21■■□□□ 1.63
SEC13-206ENST00000397102 PLCH2O75038 1416 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms