RNA–Protein interactions for RNA: ENST00000397016.6

CPNE6-201, Transcript of copine 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE6, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-201ENST00000397016 CTTNBP2Q8WZ74 1663 aa25.16■■□□□ 1.62
CPNE6-201ENST00000397016 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
CPNE6-201ENST00000397016 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
CPNE6-201ENST00000397016 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
CPNE6-201ENST00000397016 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
CPNE6-201ENST00000397016 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
CPNE6-201ENST00000397016 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
CPNE6-201ENST00000397016 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
CPNE6-201ENST00000397016 EFCAB5A4FU69 1503 aa25.05■■□□□ 1.6
CPNE6-201ENST00000397016 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
CPNE6-201ENST00000397016 ATP1B4Q9UN42 357 aaPredicted RBP25.04■■□□□ 1.6
CPNE6-201ENST00000397016 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
CPNE6-201ENST00000397016 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
CPNE6-201ENST00000397016 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
CPNE6-201ENST00000397016 TIAM1Q13009 1591 aa24.99■■□□□ 1.59
CPNE6-201ENST00000397016 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.59
CPNE6-201ENST00000397016 SAMD9Q5K651 1589 aa24.93■■□□□ 1.58
CPNE6-201ENST00000397016 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
CPNE6-201ENST00000397016 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
CPNE6-201ENST00000397016 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
CPNE6-201ENST00000397016 FYCO1Q9BQS8 1478 aa24.9■■□□□ 1.58
CPNE6-201ENST00000397016 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
CPNE6-201ENST00000397016 FMN1Q68DA7 1419 aa24.89■■□□□ 1.57
CPNE6-201ENST00000397016 RRBP1Q9P2E9 1410 aaKnown RBP24.87■■□□□ 1.57
CPNE6-201ENST00000397016 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
CPNE6-201ENST00000397016 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
CPNE6-201ENST00000397016 IQGAP2Q13576 1575 aa24.85■■□□□ 1.57
CPNE6-201ENST00000397016 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.56
CPNE6-201ENST00000397016 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
CPNE6-201ENST00000397016 GRIN2AQ12879 1464 aa24.78■■□□□ 1.56
CPNE6-201ENST00000397016 ITGAEP38570 1179 aa24.77■■□□□ 1.56
CPNE6-201ENST00000397016 FBLN2P98095 1184 aa24.76■■□□□ 1.55
CPNE6-201ENST00000397016 MAGI1Q96QZ7 1491 aaPredicted RBP24.74■■□□□ 1.55
CPNE6-201ENST00000397016 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
CPNE6-201ENST00000397016 LRRIQ1Q96JM4 1722 aa24.71■■□□□ 1.55
CPNE6-201ENST00000397016 KIAA0586Q9BVV6 1533 aa24.71■■□□□ 1.55
CPNE6-201ENST00000397016 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
CPNE6-201ENST00000397016 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
CPNE6-201ENST00000397016 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
CPNE6-201ENST00000397016 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
CPNE6-201ENST00000397016 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
CPNE6-201ENST00000397016 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
CPNE6-201ENST00000397016 DISP1Q96F81 1524 aa24.62■■□□□ 1.53
CPNE6-201ENST00000397016 KIAA0556O60303 1618 aa24.6■■□□□ 1.53
CPNE6-201ENST00000397016 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.53
CPNE6-201ENST00000397016 HECW1Q76N89 1606 aa24.58■■□□□ 1.52
CPNE6-201ENST00000397016 MAGI3Q5TCQ9 1506 aa24.54■■□□□ 1.52
CPNE6-201ENST00000397016 CCDC18Q5T9S5 1454 aa24.54■■□□□ 1.52
CPNE6-201ENST00000397016 EPRSP07814 1512 aaKnown RBP24.53■■□□□ 1.52
CPNE6-201ENST00000397016 CDK13Q14004 1512 aaKnown RBP24.53■■□□□ 1.52
CPNE6-201ENST00000397016 DHX57Q6P158 1386 aaKnown RBP24.53■■□□□ 1.52
CPNE6-201ENST00000397016 NUP160Q12769 1436 aa24.53■■□□□ 1.52
CPNE6-201ENST00000397016 NCOA2Q15596 1464 aa24.52■■□□□ 1.52
CPNE6-201ENST00000397016 EHBP1L1Q8N3D4 1523 aa24.52■■□□□ 1.52
CPNE6-201ENST00000397016 FGD6Q6ZV73 1430 aa24.5■■□□□ 1.51
CPNE6-201ENST00000397016 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
CPNE6-201ENST00000397016 JPH4Q96JJ6 628 aa24.47■■□□□ 1.51
CPNE6-201ENST00000397016 RAB3GAP2Q9H2M9 1393 aa24.47■■□□□ 1.51
CPNE6-201ENST00000397016 MYOM3Q5VTT5 1437 aa24.44■■□□□ 1.5
CPNE6-201ENST00000397016 NUP153P49790 1475 aaKnown RBP24.42■■□□□ 1.5
CPNE6-201ENST00000397016 SETD5Q9C0A6 1442 aa24.41■■□□□ 1.5
CPNE6-201ENST00000397016 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
CPNE6-201ENST00000397016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
CPNE6-201ENST00000397016 CARMIL2Q6F5E8 1435 aa24.39■■□□□ 1.5
CPNE6-201ENST00000397016 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
CPNE6-201ENST00000397016 PLB1Q6P1J6 1458 aa24.39■■□□□ 1.49
CPNE6-201ENST00000397016 CLSPNQ9HAW4 1339 aa24.34■■□□□ 1.49
CPNE6-201ENST00000397016 CHD1O14646 1710 aa24.34■■□□□ 1.49
CPNE6-201ENST00000397016 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
CPNE6-201ENST00000397016 PTPN23Q9H3S7 1636 aa24.32■■□□□ 1.48
CPNE6-201ENST00000397016 PRG4Q92954 1404 aaPredicted RBP24.27■■□□□ 1.48
CPNE6-201ENST00000397016 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
CPNE6-201ENST00000397016 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
CPNE6-201ENST00000397016 MAPKBP1O60336 1514 aa24.23■■□□□ 1.47
CPNE6-201ENST00000397016 TCOF1Q13428 1488 aaKnown RBP24.22■■□□□ 1.47
CPNE6-201ENST00000397016 ZNF316A6NFI3 1004 aaPredicted RBP24.2■■□□□ 1.46
CPNE6-201ENST00000397016 CHIC2Q9UKJ5 165 aa24.19■■□□□ 1.46
CPNE6-201ENST00000397016 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
CPNE6-201ENST00000397016 MIA2Q96PC5 1412 aa24.18■■□□□ 1.46
CPNE6-201ENST00000397016 ABCA8O94911 1581 aa24.18■■□□□ 1.46
CPNE6-201ENST00000397016 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
CPNE6-201ENST00000397016 PTPRGP23470 1445 aa24.16■■□□□ 1.46
CPNE6-201ENST00000397016 NAIPQ13075 1403 aa24.15■■□□□ 1.46
CPNE6-201ENST00000397016 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.46
CPNE6-201ENST00000397016 RRP7BPQ9NSQ0 103 aa24.14■■□□□ 1.46
CPNE6-201ENST00000397016 ZNF644Q9H582 1327 aaPredicted RBP24.14■■□□□ 1.45
CPNE6-201ENST00000397016 KIF14Q15058 1648 aa24.12■■□□□ 1.45
CPNE6-201ENST00000397016 ATP10BO94823 1461 aa24.11■■□□□ 1.45
CPNE6-201ENST00000397016 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
CPNE6-201ENST00000397016 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
CPNE6-201ENST00000397016 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
CPNE6-201ENST00000397016 SIN3AQ96ST3 1273 aa24.09■■□□□ 1.45
CPNE6-201ENST00000397016 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
CPNE6-201ENST00000397016 PLEKHD1A6NEE1 506 aa24.07■■□□□ 1.44
CPNE6-201ENST00000397016 CFDP1Q9UEE9 299 aaPredicted RBP24.04■■□□□ 1.44
CPNE6-201ENST00000397016 ADCY10Q96PN6 1610 aa24.04■■□□□ 1.44
CPNE6-201ENST00000397016 GPATCH8Q9UKJ3 1502 aaKnown RBP24.04■■□□□ 1.44
CPNE6-201ENST00000397016 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
CPNE6-201ENST00000397016 DAPK1P53355 1430 aa24.03■■□□□ 1.44
CPNE6-201ENST00000397016 UACAQ9BZF9 1416 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms