RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
NUP98-204ENST00000397004 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
NUP98-204ENST00000397004 MYT1Q01538 1121 aa20.17■□□□□ 0.82
NUP98-204ENST00000397004 SIN3AQ96ST3 1273 aa20.17■□□□□ 0.82
NUP98-204ENST00000397004 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
NUP98-204ENST00000397004 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
NUP98-204ENST00000397004 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
NUP98-204ENST00000397004 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
NUP98-204ENST00000397004 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
NUP98-204ENST00000397004 KIF21AQ7Z4S6 1674 aa20.11■□□□□ 0.81
NUP98-204ENST00000397004 SETD5Q9C0A6 1442 aa20.1■□□□□ 0.81
NUP98-204ENST00000397004 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
NUP98-204ENST00000397004 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
NUP98-204ENST00000397004 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
NUP98-204ENST00000397004 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
NUP98-204ENST00000397004 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
NUP98-204ENST00000397004 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
NUP98-204ENST00000397004 URB2Q14146 1524 aaKnown RBP20.05■□□□□ 0.8
NUP98-204ENST00000397004 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
NUP98-204ENST00000397004 PCF11O94913 1555 aaKnown RBP20.03■□□□□ 0.8
NUP98-204ENST00000397004 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
NUP98-204ENST00000397004 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
NUP98-204ENST00000397004 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
NUP98-204ENST00000397004 CFAP43Q8NDM7 1665 aa19.99■□□□□ 0.79
NUP98-204ENST00000397004 BCANQ96GW7 911 aa19.99■□□□□ 0.79
NUP98-204ENST00000397004 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
NUP98-204ENST00000397004 FHOD3Q2V2M9 1422 aa19.95■□□□□ 0.78
NUP98-204ENST00000397004 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
NUP98-204ENST00000397004 FKBP8Q14318 412 aa19.9■□□□□ 0.78
NUP98-204ENST00000397004 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
NUP98-204ENST00000397004 ATP1B4Q9UN42 357 aaPredicted RBP19.89■□□□□ 0.77
NUP98-204ENST00000397004 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
NUP98-204ENST00000397004 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
NUP98-204ENST00000397004 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
NUP98-204ENST00000397004 TARBP1Q13395 1621 aaKnown RBP19.86■□□□□ 0.77
NUP98-204ENST00000397004 FYCO1Q9BQS8 1478 aa19.81■□□□□ 0.76
NUP98-204ENST00000397004 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
NUP98-204ENST00000397004 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
NUP98-204ENST00000397004 LRRIQ1Q96JM4 1722 aa19.8■□□□□ 0.76
NUP98-204ENST00000397004 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.762e-6■■■□□ 18.3
NUP98-204ENST00000397004 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
NUP98-204ENST00000397004 CUL7Q14999 1698 aa19.79■□□□□ 0.76
NUP98-204ENST00000397004 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
NUP98-204ENST00000397004 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
NUP98-204ENST00000397004 FGD6Q6ZV73 1430 aa19.78■□□□□ 0.76
NUP98-204ENST00000397004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.78■□□□□ 0.76
NUP98-204ENST00000397004 ANP32EQ9BTT0 268 aa19.78■□□□□ 0.76
NUP98-204ENST00000397004 WDR62O43379 1518 aa19.77■□□□□ 0.76
NUP98-204ENST00000397004 CCER2I3L3R5 266 aa19.74■□□□□ 0.75
NUP98-204ENST00000397004 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
NUP98-204ENST00000397004 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
NUP98-204ENST00000397004 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
NUP98-204ENST00000397004 PTPN23Q9H3S7 1636 aa19.71■□□□□ 0.75
NUP98-204ENST00000397004 HFM1A2PYH4 1435 aa19.71■□□□□ 0.75
NUP98-204ENST00000397004 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
NUP98-204ENST00000397004 NAIPQ13075 1403 aa19.7■□□□□ 0.74
NUP98-204ENST00000397004 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
NUP98-204ENST00000397004 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
NUP98-204ENST00000397004 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
NUP98-204ENST00000397004 ANP32CO43423 234 aa19.69■□□□□ 0.74
NUP98-204ENST00000397004 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
NUP98-204ENST00000397004 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
NUP98-204ENST00000397004 TONSLQ96HA7 1378 aa19.66■□□□□ 0.74
NUP98-204ENST00000397004 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.74
NUP98-204ENST00000397004 TDRD9Q8NDG6 1382 aaKnown RBP19.64■□□□□ 0.73
NUP98-204ENST00000397004 NCOA2Q15596 1464 aa19.64■□□□□ 0.73
NUP98-204ENST00000397004 SAMD9Q5K651 1589 aa19.62■□□□□ 0.73
NUP98-204ENST00000397004 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
NUP98-204ENST00000397004 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
NUP98-204ENST00000397004 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
NUP98-204ENST00000397004 KDM6BO15054 1643 aa19.61■□□□□ 0.73
NUP98-204ENST00000397004 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
NUP98-204ENST00000397004 WASHC2AQ641Q2 1341 aa19.61■□□□□ 0.73
NUP98-204ENST00000397004 MSH5O43196 834 aa19.59■□□□□ 0.73
NUP98-204ENST00000397004 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
NUP98-204ENST00000397004 IFT140Q96RY7 1462 aa19.58■□□□□ 0.73
NUP98-204ENST00000397004 IRX6P78412 446 aaPredicted RBP19.57■□□□□ 0.72
NUP98-204ENST00000397004 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
NUP98-204ENST00000397004 C11orf95C9JLR9 678 aaPredicted RBP19.55■□□□□ 0.72
NUP98-204ENST00000397004 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
NUP98-204ENST00000397004 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
NUP98-204ENST00000397004 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
NUP98-204ENST00000397004 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
NUP98-204ENST00000397004 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
NUP98-204ENST00000397004 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
NUP98-204ENST00000397004 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
NUP98-204ENST00000397004 NEFLP07196 543 aa19.52■□□□□ 0.72
NUP98-204ENST00000397004 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
NUP98-204ENST00000397004 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
NUP98-204ENST00000397004 FOXD1Q16676 465 aa19.49■□□□□ 0.71
NUP98-204ENST00000397004 SUPT6HQ7KZ85 1726 aaKnown RBP19.49■□□□□ 0.71
NUP98-204ENST00000397004 EHBP1L1Q8N3D4 1523 aa19.46■□□□□ 0.71
NUP98-204ENST00000397004 TCOF1Q13428 1488 aaKnown RBP19.44■□□□□ 0.7
NUP98-204ENST00000397004 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
NUP98-204ENST00000397004 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
NUP98-204ENST00000397004 L3MBTL2Q969R5 705 aa19.42■□□□□ 0.7
NUP98-204ENST00000397004 NBPF8Q3BBV2 869 aa19.4■□□□□ 0.7
NUP98-204ENST00000397004 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.7
NUP98-204ENST00000397004 CDK13Q14004 1512 aaKnown RBP19.39■□□□□ 0.69
NUP98-204ENST00000397004 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms