RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 FBLN2P98095 1184 aa22.86■■□□□ 1.25
GAPDH-203ENST00000396858 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
GAPDH-203ENST00000396858 NUP160Q12769 1436 aa22.82■■□□□ 1.24
GAPDH-203ENST00000396858 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
GAPDH-203ENST00000396858 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
GAPDH-203ENST00000396858 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
GAPDH-203ENST00000396858 CLIP1P30622 1438 aa22.7■■□□□ 1.22
GAPDH-203ENST00000396858 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
GAPDH-203ENST00000396858 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
GAPDH-203ENST00000396858 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.21
GAPDH-203ENST00000396858 UGGT2Q9NYU1 1516 aa22.64■■□□□ 1.21
GAPDH-203ENST00000396858 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
GAPDH-203ENST00000396858 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
GAPDH-203ENST00000396858 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
GAPDH-203ENST00000396858 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
GAPDH-203ENST00000396858 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
GAPDH-203ENST00000396858 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
GAPDH-203ENST00000396858 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
GAPDH-203ENST00000396858 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
GAPDH-203ENST00000396858 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
GAPDH-203ENST00000396858 ERCC6L2Q5T890 1561 aa22.48■■□□□ 1.19
GAPDH-203ENST00000396858 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
GAPDH-203ENST00000396858 JPH4Q96JJ6 628 aa22.48■■□□□ 1.19
GAPDH-203ENST00000396858 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
GAPDH-203ENST00000396858 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.18
GAPDH-203ENST00000396858 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
GAPDH-203ENST00000396858 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
GAPDH-203ENST00000396858 FMN1Q68DA7 1419 aa22.36■■□□□ 1.17
GAPDH-203ENST00000396858 TTBK1Q5TCY1 1321 aaPredicted RBP22.32■■□□□ 1.16
GAPDH-203ENST00000396858 FYCO1Q9BQS8 1478 aa22.31■■□□□ 1.16
GAPDH-203ENST00000396858 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
GAPDH-203ENST00000396858 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
GAPDH-203ENST00000396858 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
GAPDH-203ENST00000396858 HECW1Q76N89 1606 aa22.28■■□□□ 1.16
GAPDH-203ENST00000396858 PTPRGP23470 1445 aa22.26■■□□□ 1.15
GAPDH-203ENST00000396858 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
GAPDH-203ENST00000396858 ABCA8O94911 1581 aa22.25■■□□□ 1.15
GAPDH-203ENST00000396858 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
GAPDH-203ENST00000396858 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
GAPDH-203ENST00000396858 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
GAPDH-203ENST00000396858 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
GAPDH-203ENST00000396858 LRRIQ1Q96JM4 1722 aa22.21■■□□□ 1.15
GAPDH-203ENST00000396858 NUP153P49790 1475 aaKnown RBP22.2■■□□□ 1.14
GAPDH-203ENST00000396858 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
GAPDH-203ENST00000396858 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
GAPDH-203ENST00000396858 ABCC2Q92887 1545 aa22.16■■□□□ 1.14
GAPDH-203ENST00000396858 ATP1B4Q9UN42 357 aaPredicted RBP22.16■■□□□ 1.14
GAPDH-203ENST00000396858 UACAQ9BZF9 1416 aa22.15■■□□□ 1.14
GAPDH-203ENST00000396858 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
GAPDH-203ENST00000396858 EPRSP07814 1512 aaKnown RBP22.13■■□□□ 1.13
GAPDH-203ENST00000396858 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
GAPDH-203ENST00000396858 ARID3CA6NKF2 412 aa22.11■■□□□ 1.13
GAPDH-203ENST00000396858 UHRF1BP1LA0JNW5 1464 aa22.09■■□□□ 1.13
GAPDH-203ENST00000396858 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
GAPDH-203ENST00000396858 APLP2Q06481 763 aa22.06■■□□□ 1.12
GAPDH-203ENST00000396858 MAGI3Q5TCQ9 1506 aa22.04■■□□□ 1.12
GAPDH-203ENST00000396858 ZCCHC11Q5TAX3 1644 aaKnown RBP22.03■■□□□ 1.12
GAPDH-203ENST00000396858 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
GAPDH-203ENST00000396858 EHBP1L1Q8N3D4 1523 aa22.02■■□□□ 1.12
GAPDH-203ENST00000396858 ATP10BO94823 1461 aa22.02■■□□□ 1.12
GAPDH-203ENST00000396858 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
GAPDH-203ENST00000396858 KDM5BQ9UGL1 1544 aa22■■□□□ 1.11
GAPDH-203ENST00000396858 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
GAPDH-203ENST00000396858 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
GAPDH-203ENST00000396858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
GAPDH-203ENST00000396858 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
GAPDH-203ENST00000396858 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
GAPDH-203ENST00000396858 TROQ12816 1431 aaPredicted RBP21.91■■□□□ 1.1
GAPDH-203ENST00000396858 SUPT6HQ7KZ85 1726 aaKnown RBP21.89■■□□□ 1.1
GAPDH-203ENST00000396858 KIF14Q15058 1648 aa21.89■■□□□ 1.09
GAPDH-203ENST00000396858 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
GAPDH-203ENST00000396858 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-203ENST00000396858 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.09
GAPDH-203ENST00000396858 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
GAPDH-203ENST00000396858 MAPKBP1O60336 1514 aa21.8■■□□□ 1.08
GAPDH-203ENST00000396858 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
GAPDH-203ENST00000396858 PLEKHD1A6NEE1 506 aa21.79■■□□□ 1.08
GAPDH-203ENST00000396858 TTC37Q6PGP7 1564 aa21.78■■□□□ 1.08
GAPDH-203ENST00000396858 NPM1P06748 294 aaKnown RBP eCLIP21.77■■□□□ 1.08
GAPDH-203ENST00000396858 ABCC10Q5T3U5 1492 aa21.76■■□□□ 1.07
GAPDH-203ENST00000396858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.07
GAPDH-203ENST00000396858 ITSN2Q9NZM3 1697 aa21.72■■□□□ 1.07
GAPDH-203ENST00000396858 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
GAPDH-203ENST00000396858 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
GAPDH-203ENST00000396858 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
GAPDH-203ENST00000396858 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
GAPDH-203ENST00000396858 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
GAPDH-203ENST00000396858 ABCA9Q8IUA7 1624 aa21.68■■□□□ 1.06
GAPDH-203ENST00000396858 RRBP1Q9P2E9 1410 aaKnown RBP21.67■■□□□ 1.06
GAPDH-203ENST00000396858 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
GAPDH-203ENST00000396858 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
GAPDH-203ENST00000396858 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
GAPDH-203ENST00000396858 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
GAPDH-203ENST00000396858 PTPN23Q9H3S7 1636 aa21.63■■□□□ 1.05
GAPDH-203ENST00000396858 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
GAPDH-203ENST00000396858 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
GAPDH-203ENST00000396858 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
GAPDH-203ENST00000396858 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
GAPDH-203ENST00000396858 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.05
GAPDH-203ENST00000396858 GLI2P10070 1586 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms